Guide to the Human Genome
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Name: DNMT3B Sequence: fasta or formatted (845aa) NCBI GI: 28559065
Description:

DNA cytosine-5 methyltransferase 3 beta isoform 6

Referenced in:

DNA Methylation

Other entries for this name:
alt prot [833aa] DNA cytosine-5 methyltransferase 3 beta isoform 2
alt prot [770aa] DNA cytosine-5 methyltransferase 3 beta isoform 3
alt prot [853aa] DNA cytosine-5 methyltransferase 3 beta isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         49           2
 C cysteine            3.0         25           2
 D aspartate           6.4         54           3
 E glutamate           6.7         57           2
 F phenylalanine       3.9         33           2
 G glycine             8.0         68           2
 H histidine           1.7         14           1
 I isoleucine          3.1         26           1
 K lysine              5.8         49           2
 L leucine             7.8         66           3
 M methionine          2.1         18           1
 N asparagine          4.4         37           3
 P proline             5.9         50           2
 Q glutamine           3.1         26           2
 R arginine            7.8         66           3
 S serine              8.9         75           3
 T threonine           5.1         43           2
 V valine              5.8         49           2
 W tryptophan          1.8         15           2
 Y tyrosine            3.0         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DNA cytosine-5 methyltransferase 3 beta isoform 6 [H... 
DNMT3B                0.986   DNA cytosine-5 methyltransferase 3 beta isoform 2 [H...
DNMT3B                0.979   DNA cytosine-5 methyltransferase 3 beta isoform 1 [Ho...
DNMT3B                0.857   DNA cytosine-5 methyltransferase 3 beta isoform 3 [H...
DNMT3A                0.466   DNA cytosine methyltransferase 3 alpha isoform a [Ho...
DNMT3A                0.466   DNA cytosine methyltransferase 3 alpha isoform a [Ho...
DNMT3A                0.466   DNA cytosine methyltransferase 3 alpha isoform b [Ho...
DNMT3L                0.131   cytosine-5-methyltransferase 3-like protein isoform ...
DNMT3L                0.131   cytosine-5-methyltransferase 3-like protein isoform ...
PWWP2B                0.021   PWWP domain containing 2 isoform 1 
ATRX                  0.019   transcriptional regulator ATRX isoform 2 
ATRX                  0.019   transcriptional regulator ATRX isoform 1 
PWWP2A                0.017   PWWP domain containing 2A isoform b 
SRRM1                 0.013   serine/arginine repetitive matrix 1 
WHSC1                 0.010   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.010   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.010   Wolf-Hirschhorn syndrome candidate 1 protein isoform ...
WHSC1                 0.010   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.010   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.010   Wolf-Hirschhorn syndrome candidate 1 protein isofor...
WHSC1L1               0.009   WHSC1L1 protein isoform long 
WHSC1L1               0.009   WHSC1L1 protein isoform short 
CHD4                  0.009   chromodomain helicase DNA binding protein 4 
MUM1                  0.008   melanoma ubiquitous mutated protein 
MSH6                  0.008   mutS homolog 6 
SRRM2                 0.008   splicing coactivator subunit SRm300 
BRPF1                 0.008   bromodomain and PHD finger-containing protein 1 isof...
BRPF1                 0.008   bromodomain and PHD finger-containing protein 1 isof...
CHD5                  0.008   chromodomain helicase DNA binding protein 5 
BAT2L                 0.007   HLA-B associated transcript 2-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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