Guide to the Human Genome
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Name: GPX5 Sequence: fasta or formatted (221aa) NCBI GI: 4557629
Description:

glutathione peroxidase 5 isoform 1 precursor

Referenced in:

Glutathione Pathways

Other entries for this name:
alt prot [100aa] glutathione peroxidase 5 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6          8           1
 C cysteine            2.3          5           1
 D aspartate           4.1          9           1
 E glutamate           6.3         14           2
 F phenylalanine       6.3         14           1
 G glycine             7.2         16           3
 H histidine           3.2          7           1
 I isoleucine          4.1          9           1
 K lysine             10.4         23           1
 L leucine            10.0         22           3
 M methionine          1.8          4           1
 N asparagine          3.6          8           1
 P proline             6.3         14           1
 Q glutamine           5.0         11           1
 R arginine            2.3          5           1
 S serine              5.0         11           2
 T threonine           4.5         10           2
 V valine              8.6         19           2
 W tryptophan          1.4          3           1
 Y tyrosine            4.1          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutathione peroxidase 5 isoform 1 precursor 
GPX3                  0.682   glutathione peroxidase 3 precursor 
GPX6                  0.657   glutathione peroxidase 6 
GPX1                  0.334   glutathione peroxidase 1 isoform 1 
GPX5                  0.334   glutathione peroxidase 5 isoform 2 precursor 
GPX2                  0.295   glutathione peroxidase 2 
GPX7                  0.153   glutathione peroxidase 7 
GPX8                  0.130   glutathione peroxidase 8 
GPX4                  0.114   glutathione peroxidase 4 isoform C precursor 
GPX4                  0.114   glutathione peroxidase 4 isoform A precursor 
GPX4                  0.096   glutathione peroxidase 4 isoform B precursor 
GPX1                  0.085   glutathione peroxidase 1 isoform 2 
ATG2A                 0.011   autophagy related 2A 
DNAH12                0.011   dynein heavy chain domain 2 isoform 1 
MLL2                  0.011   myeloid/lymphoid or mixed-lineage leukemia 2 
THOP1                 0.011   thimet oligopeptidase 1 
CDH8                  0.007   cadherin 8, type 2 preproprotein 
CSRNP1                0.007   AXIN1 up-regulated 1 
LPA                   0.007   lipoprotein Lp(a) precursor 
LAMA2                 0.007   laminin alpha 2 subunit isoform b precursor 
LAMA2                 0.007   laminin alpha 2 subunit isoform a precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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