Guide to the Human Genome
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Name: GPX1 Sequence: fasta or formatted (98aa) NCBI GI: 41406082
Description:

glutathione peroxidase 1 isoform 2

Referenced in:

Glutathione Pathways
Selenium Proteins

Other entries for this name:
alt prot [203aa] glutathione peroxidase 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            16.3         16           7
 C cysteine            2.0          2           1
 D aspartate           2.0          2           1
 E glutamate           4.1          4           1
 F phenylalanine       3.1          3           1
 G glycine            12.2         12           2
 H histidine           1.0          1           1
 I isoleucine          1.0          1           1
 K lysine              1.0          1           1
 L leucine            11.2         11           2
 M methionine          2.0          2           1
 N asparagine          3.1          3           1
 P proline             4.1          4           1
 Q glutamine           6.1          6           1
 R arginine           10.2         10           2
 S serine              5.1          5           1
 T threonine           3.1          3           2
 U selenocysteine      1.0          1           1
 V valine              9.2          9           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutathione peroxidase 1 isoform 2 
GPX1                  0.837   glutathione peroxidase 1 isoform 1 
GPX2                  0.373   glutathione peroxidase 2 
GPX7                  0.235   glutathione peroxidase 7 
GPX3                  0.229   glutathione peroxidase 3 precursor 
GPX4                  0.223   glutathione peroxidase 4 isoform B precursor 
GPX4                  0.223   glutathione peroxidase 4 isoform A precursor 
GPX5                  0.223   glutathione peroxidase 5 isoform 1 precursor 
GPX4                  0.217   glutathione peroxidase 4 isoform C precursor 
GPX8                  0.211   glutathione peroxidase 8 
GPX6                  0.175   glutathione peroxidase 6 
WT1                   0.018   Wilms tumor 1 isoform D 
WT1                   0.018   Wilms tumor 1 isoform C 
WT1                   0.018   Wilms tumor 1 isoform B 
WT1                   0.018   Wilms tumor 1 isoform A 
OPLAH                 0.018   5-oxoprolinase (ATP-hydrolysing) 
RBM24                 0.018   RNA binding motif protein 24 isoform 3 
RBM24                 0.018   RNA binding motif protein 24 isoform 2 
KRTAP4-6              0.018   PREDICTED: keratin associated protein 4.6 
EVX2                  0.018   even-skipped homeobox 2 
RBM24                 0.018   RNA binding motif protein 24 isoform 1 
OLIG2                 0.006   oligodendrocyte lineage transcription factor 2 [Homo...
LOC100133142          0.006   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.006   PREDICTED: similar to zinc finger protein 208 [Homo...
LBXCOR1               0.006   LBXCOR1 homolog 
KRTAP4-9              0.006   PREDICTED: keratin associated protein 4-9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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