Guide to the Human Genome
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Name: ATP8B2 Sequence: fasta or formatted (1223aa) NCBI GI: 40316837
Description:

ATPase, class I, type 8B, member 2 isoform a

Referenced in:

Amphipath-transporting ATPase Family

Other entries for this name:
alt prot [387aa] ATPase, class I, type 8B, member 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         81           2
 C cysteine            1.9         23           2
 D aspartate           4.6         56           2
 E glutamate           6.1         74           3
 F phenylalanine       6.4         78           2
 G glycine             6.0         73           2
 H histidine           2.0         24           2
 I isoleucine          5.7         70           3
 K lysine              5.2         64           2
 L leucine            10.9        133           4
 M methionine          2.9         35           2
 N asparagine          4.5         55           2
 P proline             3.0         37           2
 Q glutamine           4.0         49           2
 R arginine            4.9         60           2
 S serine              6.9         84           4
 T threonine           6.1         75           3
 V valine              7.4         90           2
 W tryptophan          1.5         18           1
 Y tyrosine            3.6         44           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATPase, class I, type 8B, member 2 isoform a 
ATP8B4                0.703   ATPase class I type 8B member 4 
ATP8B1                0.501   ATPase, class I, type 8B, member 1 
ATP8B3                0.370   ATPase, class I, type 8B, member 3 
ATP8A1                0.343   ATPase, aminophospholipid transporter (APLT), class ...
ATP8A2                0.339   ATPase, aminophospholipid transporter-like, Class I...
ATP8A1                0.338   ATPase, aminophospholipid transporter (APLT), class...
ATP8B2                0.278   ATPase, class I, type 8B, member 2 isoform b 
ATP11B                0.259   ATPase, class VI, type 11B 
ATP11A                0.255   ATPase, class VI, type 11A isoform b 
ATP11A                0.255   ATPase, class VI, type 11A isoform a 
ATP11C                0.251   ATPase, class VI, type 11C isoform b 
ATP11C                0.251   ATPase, class VI, type 11C isoform a 
ATP9A                 0.170   ATPase, class II, type 9A 
ATP10B                0.168   ATPase, class V, type 10B 
ATP10A                0.167   ATPase, class V, type 10A 
ATP10D                0.165   ATPase, class V, type 10D 
ATP9B                 0.164   ATPase, class II, type 9B 
ATP13A4               0.027   ATPase type 13A4 
ATP2B4                0.023   plasma membrane calcium ATPase 4 isoform 4a 
ATP2B4                0.023   plasma membrane calcium ATPase 4 isoform 4b 
ATP13A3               0.022   ATPase type 13A3 
ATP2B3                0.020   plasma membrane calcium ATPase 3 isoform 3b 
ATP2B3                0.020   plasma membrane calcium ATPase 3 isoform 3a 
ATP2B1                0.019   plasma membrane calcium ATPase 1 isoform 1a 
ATP2B1                0.019   plasma membrane calcium ATPase 1 isoform 1b 
ATP2B2                0.019   plasma membrane calcium ATPase 2 isoform 2 
ATP2B2                0.019   plasma membrane calcium ATPase 2 isoform 1 
ATP13A5               0.016   ATPase type 13A5 
ATP1A1                0.016   Na+/K+ -ATPase alpha 1 subunit isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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