Guide to the Human Genome
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Name: OPLAH Sequence: fasta or formatted (1288aa) NCBI GI: 48314820
Description:

5-oxoprolinase (ATP-hydrolysing)

Referenced in:

Glutathione Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2        118           2
 C cysteine            1.9         24           1
 D aspartate           4.3         56           2
 E glutamate           5.6         72           2
 F phenylalanine       4.0         51           2
 G glycine            11.9        153           4
 H histidine           3.3         43           2
 I isoleucine          3.6         47           2
 K lysine              1.3         17           1
 L leucine             9.9        128           2
 M methionine          2.1         27           1
 N asparagine          2.2         28           2
 P proline             6.6         85           3
 Q glutamine           4.8         62           2
 R arginine            7.1         91           2
 S serine              6.2         80           2
 T threonine           5.1         66           2
 V valine              8.5        109           3
 W tryptophan          0.2          3           1
 Y tyrosine            2.2         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   5-oxoprolinase (ATP-hydrolysing) 
PTF1A                 0.003   pancreas specific transcription factor, 1a 
CASZ1                 0.003   castor homolog 1, zinc finger isoform a 
C9orf82               0.003   hypothetical protein LOC79886 
ARID1A                0.003   AT rich interactive domain 1A isoform a 
ARID1A                0.003   AT rich interactive domain 1A isoform b 
ADCK1                 0.003   aarF domain containing kinase 1 isoform b 
ADCK1                 0.003   aarF domain containing kinase 1 isoform a 
ARID3C                0.003   AT rich interactive domain 3C (BRIGHT- like) 
LOC729570             0.003   PREDICTED: hypothetical protein 
LOC729570             0.003   PREDICTED: hypothetical protein 
LOC729570             0.003   PREDICTED: hypothetical protein 
COL4A5                0.002   type IV collagen alpha 5 isoform 2 precursor 
FGD1                  0.002   faciogenital dysplasia protein 
COL4A5                0.002   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.002   type IV collagen alpha 5 isoform 3 precursor 
LENG9                 0.002   leukocyte receptor cluster (LRC) member 9 
FREM3                 0.002   PREDICTED: FRAS1 related extracellular matrix 3 [Ho...
FREM3                 0.002   PREDICTED: FRAS1 related extracellular matrix 3 [Ho...
FREM3                 0.002   PREDICTED: FRAS1 related extracellular matrix 3 [Ho...
PRRT1                 0.002   NG5 protein 
TSC22D4               0.002   TSC22 domain family, member 4 
FREM2                 0.002   FRAS1-related extracellular matrix protein 2 precurs...
C12orf51              0.002   chromosome 12 open reading frame 51 
BAI2                  0.002   brain-specific angiogenesis inhibitor 2 
COL8A1                0.002   alpha 1 type VIII collagen precursor 
COL8A1                0.002   alpha 1 type VIII collagen precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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