Guide to the Human Genome
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Name: C3orf75 Sequence: fasta or formatted (266aa) NCBI GI: 89145415
Description:

transmembrane protein 103

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         20           1
 C cysteine            2.3          6           1
 D aspartate           5.6         15           2
 E glutamate           5.3         14           2
 F phenylalanine       6.0         16           2
 G glycine             6.4         17           1
 H histidine           3.8         10           2
 I isoleucine          2.6          7           1
 K lysine              4.9         13           1
 L leucine            14.3         38           2
 M methionine          1.9          5           1
 N asparagine          3.4          9           2
 P proline             3.4          9           1
 Q glutamine           4.9         13           1
 R arginine            4.9         13           2
 S serine              6.8         18           1
 T threonine           3.4          9           2
 V valine              9.4         25           2
 W tryptophan          1.1          3           1
 Y tyrosine            2.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 103 
NES                   0.010   nestin 
GPX1                  0.008   glutathione peroxidase 1 isoform 1 
ANAPC5                0.006   anaphase-promoting complex subunit 5 isoform b [Hom...
ANAPC5                0.006   anaphase-promoting complex subunit 5 isoform a [Homo...
UTP20                 0.006   down-regulated in metastasis 
LOC653877             0.006   PREDICTED: similar to Temporarily Assigned Gene name...
SEL1L2                0.006   sel-1 suppressor of lin-12-like 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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