Guide to the Human Genome
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Name: E4F1 Sequence: fasta or formatted (784aa) NCBI GI: 69885084
Description:

p120E4F

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.9        101           4
 C cysteine            3.1         24           1
 D aspartate           3.1         24           2
 E glutamate           9.9         78           2
 F phenylalanine       2.3         18           1
 G glycine             7.8         61           3
 H histidine           5.0         39           2
 I isoleucine          3.7         29           2
 K lysine              4.8         38           2
 L leucine             7.1         56           2
 M methionine          1.4         11           1
 N asparagine          0.8          6           1
 P proline             5.7         45           2
 Q glutamine           4.6         36           2
 R arginine            5.1         40           2
 S serine              6.4         50           2
 T threonine           7.1         56           2
 V valine              8.2         64           3
 W tryptophan          0.0          0           0
 Y tyrosine            1.0          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   p120E4F 
LOC100133142          0.109   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.109   PREDICTED: similar to zinc finger protein 208 [Homo...
ZNF628                0.103   zinc finger protein 628 
REPIN1                0.103   replication initiator 1 isoform 1 
REPIN1                0.103   replication initiator 1 isoform 1 
REPIN1                0.103   replication initiator 1 isoform 3 
REPIN1                0.103   replication initiator 1 isoform 1 
ZNF268                0.100   zinc finger protein 268 
PRDM9                 0.097   PR domain containing 9 
ZNF782                0.094   zinc finger protein 782 
ZNF572                0.092   zinc finger protein 572 
ZNF502                0.092   zinc finger protein 502 
ZNF502                0.092   zinc finger protein 502 
ZNF502                0.092   zinc finger protein 502 
ZNF502                0.092   zinc finger protein 502 
ZNF835                0.092   zinc finger protein 835 
ZNF37A                0.092   zinc finger protein 37a 
ZNF37A                0.092   zinc finger protein 37a 
ZNF124                0.092   zinc finger protein 124 
ZNF436                0.092   zinc finger protein 436 
ZNF436                0.092   zinc finger protein 436 
ZNF554                0.092   zinc finger protein 554 
GFI1                  0.091   growth factor independent 1 
GFI1                  0.091   growth factor independent 1 
GFI1                  0.091   growth factor independent 1 
ZNF167                0.091   zinc finger protein 167 isoform 1 
LOC729747             0.091   similar to zinc finger protein 709 
ZNF852                0.090   PREDICTED: zinc finger protein 852 
ZNF852                0.090   PREDICTED: zinc finger protein 852 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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