Guide to the Human Genome
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Name: DNMT3B Sequence: fasta or formatted (770aa) NCBI GI: 28559063
Description:

DNA cytosine-5 methyltransferase 3 beta isoform 3

Referenced in:

DNA Methylation

Other entries for this name:
alt prot [833aa] DNA cytosine-5 methyltransferase 3 beta isoform 2
alt prot [845aa] DNA cytosine-5 methyltransferase 3 beta isoform 6
alt prot [853aa] DNA cytosine-5 methyltransferase 3 beta isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         47           2
 C cysteine            3.0         23           2
 D aspartate           6.6         51           3
 E glutamate           6.4         49           2
 F phenylalanine       4.2         32           2
 G glycine             8.6         66           2
 H histidine           1.8         14           1
 I isoleucine          2.9         22           1
 K lysine              5.2         40           2
 L leucine             7.5         58           3
 M methionine          2.1         16           1
 N asparagine          4.2         32           3
 P proline             5.7         44           2
 Q glutamine           2.9         22           2
 R arginine            8.3         64           3
 S serine              9.0         69           3
 T threonine           5.1         39           1
 V valine              5.7         44           2
 W tryptophan          1.8         14           2
 Y tyrosine            3.1         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DNA cytosine-5 methyltransferase 3 beta isoform 3 [H... 
DNMT3B                0.938   DNA cytosine-5 methyltransferase 3 beta isoform 6 [H...
DNMT3B                0.938   DNA cytosine-5 methyltransferase 3 beta isoform 2 [H...
DNMT3B                0.931   DNA cytosine-5 methyltransferase 3 beta isoform 1 [Ho...
DNMT3A                0.397   DNA cytosine methyltransferase 3 alpha isoform a [Ho...
DNMT3A                0.397   DNA cytosine methyltransferase 3 alpha isoform a [Ho...
DNMT3A                0.397   DNA cytosine methyltransferase 3 alpha isoform b [Ho...
DNMT3L                0.154   cytosine-5-methyltransferase 3-like protein isoform ...
DNMT3L                0.152   cytosine-5-methyltransferase 3-like protein isoform ...
PWWP2B                0.023   PWWP domain containing 2 isoform 1 
ATRX                  0.020   transcriptional regulator ATRX isoform 2 
ATRX                  0.020   transcriptional regulator ATRX isoform 1 
PWWP2A                0.018   PWWP domain containing 2A isoform b 
SRRM1                 0.015   serine/arginine repetitive matrix 1 
WHSC1                 0.011   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.011   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.011   Wolf-Hirschhorn syndrome candidate 1 protein isoform ...
WHSC1                 0.011   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.011   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.011   Wolf-Hirschhorn syndrome candidate 1 protein isofor...
WHSC1L1               0.010   WHSC1L1 protein isoform long 
WHSC1L1               0.010   WHSC1L1 protein isoform short 
CHD4                  0.010   chromodomain helicase DNA binding protein 4 
MUM1                  0.009   melanoma ubiquitous mutated protein 
MSH6                  0.009   mutS homolog 6 
BRPF1                 0.009   bromodomain and PHD finger-containing protein 1 isof...
BRPF1                 0.009   bromodomain and PHD finger-containing protein 1 isof...
DSPP                  0.008   dentin sialophosphoprotein preproprotein 
CHD5                  0.008   chromodomain helicase DNA binding protein 5 
BAT2L                 0.008   HLA-B associated transcript 2-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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