Guide to the Human Genome
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Name: RBM24 Sequence: fasta or formatted (178aa) NCBI GI: 221139804
Description:

RNA binding motif protein 24 isoform 3

Referenced in:

RNA-binding Proteins

Other entries for this name:
alt prot [236aa] RNA binding motif protein 24 isoform 1
alt prot [191aa] RNA binding motif protein 24 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            29.8         53          13
 C cysteine            0.6          1           1
 D aspartate           3.4          6           1
 E glutamate           0.6          1           1
 F phenylalanine       2.8          5           1
 G glycine             7.3         13           2
 H histidine           1.7          3           1
 I isoleucine          4.5          8           2
 K lysine              1.7          3           1
 L leucine             2.8          5           1
 M methionine          1.7          3           1
 N asparagine          1.7          3           1
 P proline             9.6         17           1
 Q glutamine           9.6         17           2
 R arginine            3.4          6           1
 S serine              1.7          3           1
 T threonine           4.5          8           2
 V valine              5.1          9           2
 W tryptophan          0.0          0           0
 Y tyrosine            7.9         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RNA binding motif protein 24 isoform 3 
RBM24                 1.000   RNA binding motif protein 24 isoform 2 
RBM24                 1.000   RNA binding motif protein 24 isoform 1 
RBM38                 0.498   RNA-binding region containing protein 1 isoform a [H...
RBM38                 0.163   RNA-binding region containing protein 1 isoform b [H...
FAM48B1               0.079   hypothetical protein LOC100130302 
HOXA13                0.060   homeobox A13 
ARX                   0.060   aristaless related homeobox 
AMOT                  0.060   angiomotin isoform 2 
AMOT                  0.060   angiomotin isoform 1 
NLK                   0.057   nemo like kinase 
BHLHE41               0.054   basic helix-loop-helix domain containing, class B, 3...
FOXD1                 0.054   forkhead box D1 
MAZ                   0.051   MYC-associated zinc finger protein isoform 2 
MAZ                   0.051   MYC-associated zinc finger protein isoform 1 
EVX2                  0.051   even-skipped homeobox 2 
PUM1                  0.048   pumilio 1 isoform 2 
PUM1                  0.048   pumilio 1 isoform 1 
ELN                   0.048   elastin isoform e precursor 
ELN                   0.048   elastin isoform d precursor 
ELN                   0.048   elastin isoform c precursor 
ELN                   0.048   elastin isoform b precursor 
ELN                   0.048   elastin isoform a precursor 
SOX21                 0.048   SRY-box 21 
LBXCOR1               0.048   LBXCOR1 homolog 
FOXD3                 0.045   forkhead box D3 
C10orf140             0.045   hypothetical protein LOC387640 
RBM14                 0.042   RNA binding motif protein 14 
KRTAP4-6              0.042   PREDICTED: keratin associated protein 4.6 
NKX2-3                0.042   NK2 transcription factor related, locus 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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