OTUD4 27629

Name: OTUD4	Sequence: fasta or formatted (1048aa)		NCBI GI: 40807496
Description: OTU domain containing 4 protein isoform 1		Referenced in: Ubiquitin and Related Protein Modifications
Other entries for this name: alt prot [1049aa] OTU domain containing 4 protein isoform 3 alt prot [145aa] OTU domain containing 4 protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 58 5 C cysteine 1.3 14 1 D aspartate 4.9 51 2 E glutamate 8.0 84 2 F phenylalanine 3.1 33 3 G glycine 5.4 57 2 H histidine 3.0 31 1 I isoleucine 3.1 32 2 K lysine 6.4 67 2 L leucine 7.2 75 2 M methionine 1.3 14 1 N asparagine 4.5 47 2 P proline 9.6 101 3 Q glutamine 5.2 55 2 R arginine 5.2 55 3 S serine 11.5 120 4 T threonine 4.0 42 2 V valine 6.3 66 2 W tryptophan 0.9 9 1 Y tyrosine 3.5 37 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 OTU domain containing 4 protein isoform 1 OTUD4 0.998 OTU domain containing 4 protein isoform 3 OTUD4 0.128 OTU domain containing 4 protein isoform 2 SETD1A 0.015 SET domain containing 1A RERE 0.015 atrophin-1 like protein isoform b RERE 0.015 atrophin-1 like protein isoform a RERE 0.015 atrophin-1 like protein isoform a MLLT1 0.013 myeloid/lymphoid or mixed-lineage leukemia (trithora... CREBBP 0.012 CREB binding protein isoform b CREBBP 0.012 CREB binding protein isoform a SRRM2 0.012 splicing coactivator subunit SRm300 AUTS2 0.011 autism susceptibility candidate 2 isoform 2 AUTS2 0.011 autism susceptibility candidate 2 isoform 1 MICAL3 0.010 microtubule associated monoxygenase, calponin and L... PRG4 0.010 proteoglycan 4 isoform B PRG4 0.010 proteoglycan 4 isoform A SRRM1 0.010 serine/arginine repetitive matrix 1 MUC2 0.009 mucin 2 precursor NCOR2 0.009 nuclear receptor co-repressor 2 isoform 2 FLJ22184 0.009 PREDICTED: hypothetical protein FLJ22184 CRKRS 0.009 Cdc2-related kinase, arginine/serine-rich isoform 2... CRKRS 0.009 Cdc2-related kinase, arginine/serine-rich isoform 1... BCORL1 0.008 BCL6 co-repressor-like 1 PRG4 0.008 proteoglycan 4 isoform D PRG4 0.008 proteoglycan 4 isoform C BAT2 0.008 HLA-B associated transcript-2 PRDM2 0.008 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.008 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.008 retinoblastoma protein-binding zinc finger protein i... RAPH1 0.008 Ras association and pleckstrin homology domains 1 is... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.