USP4 27555

Name: USP4	Sequence: fasta or formatted (916aa)		NCBI GI: 40795667
Description: ubiquitin specific protease 4 isoform b		Referenced in: Ubiquitin and Related Protein Modifications
Other entries for this name: alt prot [963aa] ubiquitin specific protease 4 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 50 2 C cysteine 2.7 25 1 D aspartate 6.3 58 2 E glutamate 7.8 71 3 F phenylalanine 3.8 35 1 G glycine 6.1 56 3 H histidine 2.4 22 1 I isoleucine 2.7 25 1 K lysine 6.2 57 4 L leucine 9.8 90 3 M methionine 2.3 21 1 N asparagine 4.6 42 1 P proline 5.3 49 2 Q glutamine 4.6 42 3 R arginine 4.7 43 2 S serine 8.0 73 3 T threonine 5.0 46 2 V valine 6.1 56 2 W tryptophan 1.6 15 1 Y tyrosine 4.4 40 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin specific protease 4 isoform b USP4 0.987 ubiquitin specific protease 4 isoform a USP15 0.577 ubiquitin specific peptidase 15 USP11 0.416 ubiquitin specific peptidase 11 USP19 0.200 ubiquitin thioesterase 19 USP32 0.142 ubiquitin specific protease 32 USP6 0.127 ubiquitin specific protease 6 USP8 0.088 ubiquitin specific peptidase 8 USP8 0.088 ubiquitin specific peptidase 8 USP8 0.088 ubiquitin specific peptidase 8 USP43 0.076 ubiquitin specific protease 43 USP31 0.075 ubiquitin specific peptidase 31 USP2 0.072 ubiquitin specific peptidase 2 isoform a USP2 0.071 ubiquitin specific peptidase 2 isoform b USP3 0.061 ubiquitin thiolesterase 3 USP21 0.055 ubiquitin-specific protease 21 USP21 0.055 ubiquitin-specific protease 21 USP45 0.055 ubiquitin specific peptidase 45 USP33 0.050 ubiquitin specific protease 33 isoform 3 USP33 0.050 ubiquitin specific protease 33 isoform 1 USP33 0.050 ubiquitin specific protease 33 isoform 2 USP20 0.046 ubiquitin specific protease 20 USP20 0.046 ubiquitin specific protease 20 USP20 0.046 ubiquitin specific protease 20 LOC100294407 0.040 PREDICTED: similar to hCG2039376 USP50 0.038 ubiquitin specific protease 50 USP16 0.035 ubiquitin specific protease 16 isoform b USP16 0.035 ubiquitin specific protease 16 isoform a USP16 0.035 ubiquitin specific protease 16 isoform a USP22 0.034 ubiquitin thiolesterase 22 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.