Guide to the Human Genome
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Name: USP2 Sequence: fasta or formatted (605aa) NCBI GI: 188528692
Description:

ubiquitin specific peptidase 2 isoform a

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [396aa] ubiquitin specific peptidase 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         29           2
 C cysteine            2.5         15           2
 D aspartate           5.5         33           2
 E glutamate           4.6         28           2
 F phenylalanine       3.6         22           1
 G glycine             7.4         45           3
 H histidine           1.8         11           2
 I isoleucine          2.6         16           2
 K lysine              4.3         26           2
 L leucine            10.7         65           2
 M methionine          1.8         11           1
 N asparagine          4.0         24           2
 P proline             6.3         38           2
 Q glutamine           3.8         23           2
 R arginine            8.6         52           1
 S serine             10.7         65           3
 T threonine           7.3         44           2
 V valine              3.6         22           2
 W tryptophan          0.8          5           1
 Y tyrosine            5.1         31           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin specific peptidase 2 isoform a 
USP2                  0.572   ubiquitin specific peptidase 2 isoform b 
USP21                 0.258   ubiquitin-specific protease 21 
USP21                 0.258   ubiquitin-specific protease 21 
USP8                  0.202   ubiquitin specific peptidase 8 
USP8                  0.202   ubiquitin specific peptidase 8 
USP8                  0.202   ubiquitin specific peptidase 8 
USP3                  0.141   ubiquitin thiolesterase 3 
USP22                 0.122   ubiquitin thiolesterase 22 
USP27X                0.119   X-linked ubiquitin thioesterase 27 
USP15                 0.116   ubiquitin specific peptidase 15 
USP4                  0.111   ubiquitin specific protease 4 isoform b 
USP4                  0.110   ubiquitin specific protease 4 isoform a 
USP50                 0.109   ubiquitin specific protease 50 
USP11                 0.106   ubiquitin specific peptidase 11 
USP6                  0.104   ubiquitin specific protease 6 
USP51                 0.104   ubiquitin specific protease 51 
USP32                 0.104   ubiquitin specific protease 32 
USP19                 0.103   ubiquitin thioesterase 19 
USP33                 0.091   ubiquitin specific protease 33 isoform 3 
USP33                 0.089   ubiquitin specific protease 33 isoform 1 
USP33                 0.089   ubiquitin specific protease 33 isoform 2 
LOC728379             0.086   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC728373             0.086   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC728419             0.086   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728405             0.086   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728400             0.086   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728393             0.086   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
USP17L5               0.086   PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17...
LOC728379             0.086   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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