LOC100294407 20808

Name: LOC100294407	Sequence: fasta or formatted (858aa)		NCBI GI: 239751420
Description: PREDICTED: similar to hCG2039376		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 51 2 C cysteine 2.3 20 2 D aspartate 4.8 41 2 E glutamate 6.5 56 3 F phenylalanine 4.0 34 1 G glycine 7.6 65 2 H histidine 2.2 19 1 I isoleucine 4.1 35 2 K lysine 5.0 43 3 L leucine 10.5 90 2 M methionine 1.9 16 1 N asparagine 4.7 40 3 P proline 5.0 43 2 Q glutamine 3.5 30 2 R arginine 6.6 57 3 S serine 7.9 68 4 T threonine 5.8 50 2 V valine 6.6 57 2 W tryptophan 2.0 17 2 Y tyrosine 3.0 26 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG2039376 USP32 0.762 ubiquitin specific protease 32 USP6 0.097 ubiquitin specific protease 6 USP11 0.047 ubiquitin specific peptidase 11 USP4 0.043 ubiquitin specific protease 4 isoform a USP4 0.043 ubiquitin specific protease 4 isoform b USP15 0.043 ubiquitin specific peptidase 15 USP19 0.027 ubiquitin thioesterase 19 USP8 0.027 ubiquitin specific peptidase 8 USP8 0.027 ubiquitin specific peptidase 8 USP8 0.027 ubiquitin specific peptidase 8 FREQ 0.026 frequenin homolog isoform 2 FREQ 0.026 frequenin homolog isoform 1 GUCA1B 0.022 guanylate cyclase activator 1B (retina) NCALD 0.021 neurocalcin delta NCALD 0.021 neurocalcin delta NCALD 0.021 neurocalcin delta NCALD 0.021 neurocalcin delta NCALD 0.021 neurocalcin delta NCALD 0.021 neurocalcin delta NCALD 0.021 neurocalcin delta NCALD 0.021 neurocalcin delta GUCA1A 0.021 guanylate cyclase activator 1A (retina) HPCAL1 0.021 hippocalcin-like 1 HPCAL1 0.021 hippocalcin-like 1 VSNL1 0.020 visinin-like 1 KCNIP2 0.020 Kv channel interacting protein 2 isoform 6 EFCAB1 0.020 EF-hand calcium binding domain 1 isoform b HPCA 0.020 hippocalcin KCNIP2 0.019 Kv channel interacting protein 2 isoform 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.