Guide to the Human Genome
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Name: SPNS3 Sequence: fasta or formatted (512aa) NCBI GI: 194239645
Description:

spinster homolog 3

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         49           3
 C cysteine            2.9         15           2
 D aspartate           3.1         16           1
 E glutamate           3.5         18           2
 F phenylalanine       4.5         23           2
 G glycine            10.4         53           3
 H histidine           0.8          4           1
 I isoleucine          4.9         25           2
 K lysine              1.0          5           2
 L leucine            14.1         72           3
 M methionine          1.6          8           1
 N asparagine          2.0         10           1
 P proline             6.6         34           3
 Q glutamine           3.1         16           2
 R arginine            5.3         27           2
 S serine              8.2         42           3
 T threonine           5.3         27           2
 V valine              7.8         40           3
 W tryptophan          2.5         13           1
 Y tyrosine            2.9         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   spinster homolog 3 
SPNS1                 0.455   spinster homolog 1 isoform 1 
SPNS1                 0.455   spinster homolog 1 isoform 1 
SPNS1                 0.423   spinster homolog 1 isoform 2 
SPNS2                 0.390   spinster homolog 2 
SPNS1                 0.372   spinster homolog 1 isoform 3 
SPNS1                 0.335   spinster homolog 1 isoform 4 
SLCO5A1               0.025   solute carrier organic anion transporter family, me...
SLCO5A1               0.025   solute carrier organic anion transporter family, me...
SVOPL                 0.024   SVOP-like isoform 1 
SLC2A8                0.021   solute carrier family 2 (facilitated glucose transpo...
SLC22A2               0.020   solute carrier family 22 member 2 
SLCO5A1               0.019   solute carrier organic anion transporter family, me...
SLC22A13              0.018   solute carrier family 22 (organic anion transporter...
SLC22A1               0.018   solute carrier family 22 member 1 isoform b 
SLC22A1               0.018   solute carrier family 22 member 1 isoform a 
SLC22A15              0.017   solute carrier family 22, member 15 
SLC2A12               0.017   solute carrier family 2 (facilitated glucose transpo...
SLC2A10               0.016   solute carrier family 2 member 10 
SLC16A5               0.015   solute carrier family 16, member 5 
SLC22A7               0.014   solute carrier family 22 member 7 isoform b 
SLC22A7               0.014   solute carrier family 22 member 7 isoform a 
SLCO4C1               0.014   solute carrier organic anion transporter family, mem...
SLC22A16              0.014   solute carrier family 22, member 16 
SLC22A18              0.013   tumor suppressing subtransferable candidate 5 [Homo...
SLC2A11               0.013   glucose transporter protein 10 isoform a 
SLC2A11               0.013   glucose transporter protein 10 isoform c 
SLC2A11               0.013   glucose transporter protein 10 isoform b 
SLC22A18              0.013   tumor suppressing subtransferable candidate 5 [Homo...
MFSD10                0.013   major facilitator superfamily domain containing 10 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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