Guide to the Human Genome
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Name: IL27 Sequence: fasta or formatted (243aa) NCBI GI: 28416913
Description:

interleukin 27

Referenced in:

Interleukins and Their Receptors
Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         15           2
 C cysteine            0.4          1           1
 D aspartate           2.1          5           1
 E glutamate           9.1         22          13
 F phenylalanine       3.7          9           1
 G glycine             8.2         20           2
 H histidine           2.9          7           1
 I isoleucine          0.4          1           1
 K lysine              1.2          3           1
 L leucine            21.8         53           4
 M methionine          1.6          4           1
 N asparagine          1.2          3           1
 P proline             7.4         18           2
 Q glutamine           6.6         16           1
 R arginine            8.6         21           2
 S serine              6.6         16           1
 T threonine           3.7          9           2
 V valine              4.5         11           1
 W tryptophan          2.9          7           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 27 
BZRAP1                0.028   peripheral benzodiazepine receptor-associated prote...
BZRAP1                0.028   peripheral benzodiazepine receptor-associated prote...
ZFHX3                 0.024   AT-binding transcription factor 1 
TTBK1                 0.021   tau tubulin kinase 1 
ZMYND15               0.021   zinc finger, MYND-type containing 15 isoform 1 [Hom...
ZMYND15               0.021   zinc finger, MYND-type containing 15 isoform 2 [Homo...
SCAF1                 0.021   SR-related CTD-associated factor 1 
EHMT2                 0.019   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.019   euchromatic histone-lysine N-methyltransferase 2 is...
CLCF1                 0.019   cardiotrophin-like cytokine factor 1 
SLC24A1               0.019   solute carrier family 24 (sodium/potassium/calcium ex...
PPARGC1B              0.017   peroxisome proliferator-activated receptor gamma, co...
PRG2                  0.017   plasticity-related protein 2 
GPKOW                 0.017   G patch domain and KOW motifs 
C21orf63              0.017   hypothetical protein LOC59271 
RFX1                  0.017   regulatory factor X1 
MYST4                 0.017   MYST histone acetyltransferase (monocytic leukemia)...
SHROOM4               0.015   shroom family member 4 
DAPK1                 0.015   death-associated protein kinase 1 
GRWD1                 0.015   glutamate-rich WD repeat containing 1 
KCNA4                 0.015   potassium voltage-gated channel, shaker-related subfa...
TAOK2                 0.015   TAO kinase 2 isoform 1 
TAOK2                 0.015   TAO kinase 2 isoform 2 
CACNA1F               0.015   calcium channel, voltage-dependent, L type, alpha 1F...
CCDC121               0.015   coiled-coil domain containing 121 isoform 2 
CCDC121               0.015   coiled-coil domain containing 121 isoform 1 
SAPS1                 0.015   SAPS domain family, member 1 
C9orf75               0.015   hypothetical protein LOC286262 isoform 2 
C9orf75               0.015   hypothetical protein LOC286262 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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