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Search of human proteins with 40255251
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40255251 hypothetical protein LOC131408 [Homo sapiens]
(335 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40255251 hypothetical protein LOC131408 [Homo sapiens] 684 0.0
gi|164519061 hypothetical protein LOC9715 isoform b [Homo sapiens] 135 7e-32
gi|164565452 hypothetical protein LOC9715 isoform a [Homo sapiens] 135 7e-32
gi|157502173 hypothetical protein LOC348487 [Homo sapiens] 104 1e-22
gi|221219048 transducin-like enhancer protein 2 isoform 2 [Homo ... 38 0.015
gi|21361151 transducin-like enhancer protein 2 isoform 1 [Homo s... 38 0.015
gi|148922920 DENN/MADD domain containing 4B [Homo sapiens] 35 0.094
gi|110611228 utrophin [Homo sapiens] 33 0.27
gi|153945836 endothelin converting enzyme 2 isoform E [Homo sapi... 33 0.36
gi|221219050 transducin-like enhancer protein 2 isoform 3 [Homo ... 33 0.36
gi|27502386 nuclear factor of activated T-cells, cytosolic compo... 32 0.80
gi|221139926 NHS-like 1 [Homo sapiens] 32 1.0
gi|171543825 gamma-glutamyltransferase 6 isoform a [Homo sapiens] 31 1.4
gi|171543823 gamma-glutamyltransferase 6 isoform b [Homo sapiens] 31 1.4
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 31 1.4
gi|68299759 ecotropic viral integration site 5 [Homo sapiens] 30 2.3
gi|157674363 protein phosphatase 1, regulatory subunit 15A [Homo... 30 2.3
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 30 2.3
gi|6042196 cathepsin F [Homo sapiens] 30 2.3
gi|239743064 PREDICTED: hypothetical protein XP_002342749 [Homo ... 30 3.0
gi|83582817 small proline-rich protein 2E [Homo sapiens] 30 3.0
gi|239746716 PREDICTED: hypothetical protein XP_002343819 [Homo ... 30 4.0
gi|55741677 SET domain containing 1A [Homo sapiens] 30 4.0
gi|153945771 endothelin converting enzyme 2 isoform D [Homo sapi... 30 4.0
gi|14249386 zinc finger protein 496 [Homo sapiens] 30 4.0
gi|134031945 SCO-spondin [Homo sapiens] 29 5.2
gi|16554564 caspase recruitment domain family, member 6 [Homo sa... 29 5.2
gi|188035910 heterochromatin protein 1-alpha [Homo sapiens] 29 6.8
gi|188035908 heterochromatin protein 1-alpha [Homo sapiens] 29 6.8
gi|6912292 heterochromatin protein 1-alpha [Homo sapiens] 29 6.8
>gi|40255251 hypothetical protein LOC131408 [Homo sapiens]
Length = 335
Score = 684 bits (1766), Expect = 0.0
Identities = 335/335 (100%), Positives = 335/335 (100%)
Query: 1 MFLATLSFLLPFAHPFGTVSCEYMLGSPLSSLAQVNLSPFSHPKVHMDPNYCHPSTSLHL 60
MFLATLSFLLPFAHPFGTVSCEYMLGSPLSSLAQVNLSPFSHPKVHMDPNYCHPSTSLHL
Sbjct: 1 MFLATLSFLLPFAHPFGTVSCEYMLGSPLSSLAQVNLSPFSHPKVHMDPNYCHPSTSLHL 60
Query: 61 CSLAWSFTRLLHPPLSPGISQVVKDHVTKPTAMAQGRVAHLIEWKGWSKPSDSPAALESA 120
CSLAWSFTRLLHPPLSPGISQVVKDHVTKPTAMAQGRVAHLIEWKGWSKPSDSPAALESA
Sbjct: 61 CSLAWSFTRLLHPPLSPGISQVVKDHVTKPTAMAQGRVAHLIEWKGWSKPSDSPAALESA 120
Query: 121 FSSYSDLSEGEQEARFAAGVAEQFAIAEAKLRAWSSVDGEDSTDDSYDEDFAGGMDTDMA 180
FSSYSDLSEGEQEARFAAGVAEQFAIAEAKLRAWSSVDGEDSTDDSYDEDFAGGMDTDMA
Sbjct: 121 FSSYSDLSEGEQEARFAAGVAEQFAIAEAKLRAWSSVDGEDSTDDSYDEDFAGGMDTDMA 180
Query: 181 GQLPLGPHLQDLFTGHRFSRPVRQGSVEPESDCSQTVSPDTLCSSLCSLEDGLLGSPARL 240
GQLPLGPHLQDLFTGHRFSRPVRQGSVEPESDCSQTVSPDTLCSSLCSLEDGLLGSPARL
Sbjct: 181 GQLPLGPHLQDLFTGHRFSRPVRQGSVEPESDCSQTVSPDTLCSSLCSLEDGLLGSPARL 240
Query: 241 ASQLLGDELLLAKLPPSRESAFRSLGPLEAQDSLYNSPLTESCLSPAEEEPAPCKDCQPL 300
ASQLLGDELLLAKLPPSRESAFRSLGPLEAQDSLYNSPLTESCLSPAEEEPAPCKDCQPL
Sbjct: 241 ASQLLGDELLLAKLPPSRESAFRSLGPLEAQDSLYNSPLTESCLSPAEEEPAPCKDCQPL 300
Query: 301 CPPLTGSWERQRQASDLASSGVVSLDEDEAEPEEQ 335
CPPLTGSWERQRQASDLASSGVVSLDEDEAEPEEQ
Sbjct: 301 CPPLTGSWERQRQASDLASSGVVSLDEDEAEPEEQ 335
>gi|164519061 hypothetical protein LOC9715 isoform b [Homo sapiens]
Length = 332
Score = 135 bits (339), Expect = 7e-32
Identities = 109/284 (38%), Positives = 141/284 (49%), Gaps = 46/284 (16%)
Query: 78 GISQVVKDHVTKPTAMAQGRVAHLIEWKGWSK-----PSDSPAALESAFSSYSDLSEGEQ 132
GIS+ +KDHVTKPTAM QGRVAH+IEW+GW K P S ++ +YSDLS+GE+
Sbjct: 62 GISRSMKDHVTKPTAMGQGRVAHMIEWQGWGKTPAVQPQHSHESVRRDTDAYSDLSDGEK 121
Query: 133 EARFAAGVAEQFAIAEAKLRAWSSVDGEDSTDDS--------YDEDFAGGMDT-DMAGQL 183
EARF AGV EQFAI+EA L AWSS+DGED + +S Y +++ MD+ D Q
Sbjct: 122 EARFLAGVMEQFAISEATLMAWSSMDGEDMSVNSTQEPLGCNYSDNYQELMDSQDALAQA 181
Query: 184 PLG--PH---LQDLFTGHRFSRPVRQGSVEPESDCSQTVSPDT-------LCSSLCSLED 231
P+ PH Q ++ + SD S SP T S SL +
Sbjct: 182 PMDGWPHSYVSQGMYC-------LGSSDAWEASDQSLIASPATGSYLGPAFDDSQPSLHE 234
Query: 232 GLLGSPARLASQLLGDELLLAKL--PPSRESAFRSLGPLEAQDSLYNSPLTESCLSPAEE 289
PA S L LL P + + GP E + + L+P EE
Sbjct: 235 MGPSQPASGYSALEPPPLLGGDTDWAPGVGAVDLARGPAEEE---------KRPLAPEEE 285
Query: 290 EPAPCKDCQPLCP--PLTGSWERQRQASDLASSGVVSLDEDEAE 331
E A C+D + L P S R+ SD+ SSGV S DE+E E
Sbjct: 286 EDAGCRDLESLSPREDPEMSTALSRKVSDVTSSGVQSFDEEEGE 329
>gi|164565452 hypothetical protein LOC9715 isoform a [Homo sapiens]
Length = 360
Score = 135 bits (339), Expect = 7e-32
Identities = 109/284 (38%), Positives = 141/284 (49%), Gaps = 46/284 (16%)
Query: 78 GISQVVKDHVTKPTAMAQGRVAHLIEWKGWSK-----PSDSPAALESAFSSYSDLSEGEQ 132
GIS+ +KDHVTKPTAM QGRVAH+IEW+GW K P S ++ +YSDLS+GE+
Sbjct: 90 GISRSMKDHVTKPTAMGQGRVAHMIEWQGWGKTPAVQPQHSHESVRRDTDAYSDLSDGEK 149
Query: 133 EARFAAGVAEQFAIAEAKLRAWSSVDGEDSTDDS--------YDEDFAGGMDT-DMAGQL 183
EARF AGV EQFAI+EA L AWSS+DGED + +S Y +++ MD+ D Q
Sbjct: 150 EARFLAGVMEQFAISEATLMAWSSMDGEDMSVNSTQEPLGCNYSDNYQELMDSQDALAQA 209
Query: 184 PLG--PH---LQDLFTGHRFSRPVRQGSVEPESDCSQTVSPDT-------LCSSLCSLED 231
P+ PH Q ++ + SD S SP T S SL +
Sbjct: 210 PMDGWPHSYVSQGMYC-------LGSSDAWEASDQSLIASPATGSYLGPAFDDSQPSLHE 262
Query: 232 GLLGSPARLASQLLGDELLLAKL--PPSRESAFRSLGPLEAQDSLYNSPLTESCLSPAEE 289
PA S L LL P + + GP E + + L+P EE
Sbjct: 263 MGPSQPASGYSALEPPPLLGGDTDWAPGVGAVDLARGPAEEE---------KRPLAPEEE 313
Query: 290 EPAPCKDCQPLCP--PLTGSWERQRQASDLASSGVVSLDEDEAE 331
E A C+D + L P S R+ SD+ SSGV S DE+E E
Sbjct: 314 EDAGCRDLESLSPREDPEMSTALSRKVSDVTSSGVQSFDEEEGE 357
>gi|157502173 hypothetical protein LOC348487 [Homo sapiens]
Length = 280
Score = 104 bits (259), Expect = 1e-22
Identities = 65/147 (44%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 78 GISQVVKDHVTKPTAMAQGRVAHLIEWKGWSKPSDSPAALESAFSSYSDLSEGEQEARFA 137
G+ Q +KDH+TKPTAMA+GRVAHLIEWKGWS + Y L + +EARFA
Sbjct: 90 GVVQSIKDHITKPTAMARGRVAHLIEWKGWSAQPAGWELSPAEDEHYCCLPDELREARFA 149
Query: 138 AGVAEQFAIAEAKLRAWSSVDGEDSTDDSYDEDFAGGMDTD---MAGQLPLGPHLQDLFT 194
AGVAEQFAI EA L AWSS+D E+ ++ + D + + LP GP D
Sbjct: 150 AGVAEQFAITEATLSAWSSLDEEELHPENSPQGIVQLQDLESIYLQDSLPSGPSQDDSL- 208
Query: 195 GHRFSRPVRQGSVEPESDCSQTVSPDT 221
FS P S P+S S P T
Sbjct: 209 -QAFSSP----SPSPDSCPSPEEPPST 230
>gi|221219048 transducin-like enhancer protein 2 isoform 2 [Homo
sapiens]
Length = 706
Score = 37.7 bits (86), Expect = 0.015
Identities = 53/196 (27%), Positives = 74/196 (37%), Gaps = 12/196 (6%)
Query: 116 ALESAFSSYSDLSEGEQEARFAAGV-AEQFAIAEAKLRAWSSVDGEDSTDDSYDEDFAGG 174
AL A ++ + L+ +E R AGV AE + A R+ S E ++ GG
Sbjct: 169 ALSGALAAQAQLAAAVKEDR--AGVEAEGSRVERAPSRSASPSPPESLVEEERPSGPGGG 226
Query: 175 MDTDMAGQLPLGPHLQDLFTGHRFSRPVRQGSVEPESDCSQTVSPDTLCSSLCSLEDGLL 234
+ P GP+ D EP S + +C L+
Sbjct: 227 GKQRADEKEPSGPYESDEDKSDYNLVVDEDQPSEPPSPATTPCGKVPIC---IPARRDLV 283
Query: 235 GSPARLASQL-----LGDELLLAKLPPSRESAFRSLGPLEAQDSLYNSPLTESCLSPAEE 289
SPA LAS L EL+L LP S ++ +S QD+ P + S L
Sbjct: 284 DSPASLASSLGSPLPRAKELILNDLPASTPAS-KSCDSSPPQDASTPGPSSASHLCQLAA 342
Query: 290 EPAPCKDCQPLCPPLT 305
+PAP D L PLT
Sbjct: 343 KPAPSTDSVALRSPLT 358
>gi|21361151 transducin-like enhancer protein 2 isoform 1 [Homo
sapiens]
Length = 743
Score = 37.7 bits (86), Expect = 0.015
Identities = 53/196 (27%), Positives = 74/196 (37%), Gaps = 12/196 (6%)
Query: 116 ALESAFSSYSDLSEGEQEARFAAGV-AEQFAIAEAKLRAWSSVDGEDSTDDSYDEDFAGG 174
AL A ++ + L+ +E R AGV AE + A R+ S E ++ GG
Sbjct: 155 ALSGALAAQAQLAAAVKEDR--AGVEAEGSRVERAPSRSASPSPPESLVEEERPSGPGGG 212
Query: 175 MDTDMAGQLPLGPHLQDLFTGHRFSRPVRQGSVEPESDCSQTVSPDTLCSSLCSLEDGLL 234
+ P GP+ D EP S + +C L+
Sbjct: 213 GKQRADEKEPSGPYESDEDKSDYNLVVDEDQPSEPPSPATTPCGKVPIC---IPARRDLV 269
Query: 235 GSPARLASQL-----LGDELLLAKLPPSRESAFRSLGPLEAQDSLYNSPLTESCLSPAEE 289
SPA LAS L EL+L LP S ++ +S QD+ P + S L
Sbjct: 270 DSPASLASSLGSPLPRAKELILNDLPASTPAS-KSCDSSPPQDASTPGPSSASHLCQLAA 328
Query: 290 EPAPCKDCQPLCPPLT 305
+PAP D L PLT
Sbjct: 329 KPAPSTDSVALRSPLT 344
>gi|148922920 DENN/MADD domain containing 4B [Homo sapiens]
Length = 1496
Score = 35.0 bits (79), Expect = 0.094
Identities = 69/243 (28%), Positives = 87/243 (35%), Gaps = 26/243 (10%)
Query: 65 WSFTRLLHPPLSPGISQVVKDHVTKPTAMAQ----GRVAHLIEWKGWSKPSDSPAALESA 120
W+ L P PG ++VK AQ VAH+IE G +P SP
Sbjct: 943 WAGRSLRDPASPPG--RLVKSGSLGSARGAQPTVEAGVAHMIEALGVLEPRGSPVPWHDG 1000
Query: 121 FSSYSDLS-EGEQEARFAAGVAEQFAIAEAKLRAWSSVDGEDSTDDSYDEDFAGGMDTDM 179
S SDLS GE+ + A++ A + G AGG D
Sbjct: 1001 --SLSDLSLTGEEPLPGGSPGGSGSALSAQSTEALEGLSGRGPK--------AGGRQ-DE 1049
Query: 180 AG--QLPLGPHLQDLFTGHRFSRPVRQGSVEPESDCSQTVSPDTLCSSLCSLEDGLLGSP 237
AG + LG LQ L T R S R E D + S L E GS
Sbjct: 1050 AGTPRRGLGARLQQLLTPSRHSPASRIPPPELPPDLPPPARRSPMDSLLHPRERP--GST 1107
Query: 238 ARLASQLLGDELLLAKLPPSRESAFRSLGPLEAQDSLYNSPLTESCLSPAEEEPAPCKDC 297
A +S LG E L++ S S RS L + SP E LS + C+ C
Sbjct: 1108 ASESSASLGSEWDLSESSLSNLSLRRSSERLSDTPGSFQSPSLEILLSSC----SLCRAC 1163
Query: 298 QPL 300
L
Sbjct: 1164 DSL 1166
>gi|110611228 utrophin [Homo sapiens]
Length = 3433
Score = 33.5 bits (75), Expect = 0.27
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 91 TAMAQGRVAHLIEWKGWSKPSDSPAALESAFSSYSDL----SEGEQEARFAAGVAEQFAI 146
T + GR H+++ + P L S Y+DL +EG+Q+ A+ +A +
Sbjct: 1494 TVIKTGR--HIVQKQQTDNPKGMDEQLTSLKVLYNDLGAQVTEGKQDLERASQLARKMKK 1551
Query: 147 AEAKLRAWSSVDGEDSTDDSYDEDFAGGMDTDMA 180
A L W S + S E G +DT+++
Sbjct: 1552 EAASLSEWLSATETELVQKSTSEGLLGDLDTEIS 1585
>gi|153945836 endothelin converting enzyme 2 isoform E [Homo
sapiens]
Length = 765
Score = 33.1 bits (74), Expect = 0.36
Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 16/138 (11%)
Query: 189 LQDLFTGHR---FSRPVRQGSVEPESDCSQTVSPDTLCSSLCSLEDGLLGSPARLASQLL 245
LQ+L G + R + PE+ SPD + LLGS +L L
Sbjct: 5 LQELGAGSNMVEYKRATLRDEDAPETPVEGGASPDAMEVGFQKGTRQLLGSRTQLELVLA 64
Query: 246 GDELLLAKLPPSRESAFRSLGPLEAQDSLYNSPLTESCLSPA-------EEEPAPCKDCQ 298
G LLLA L +LG +D +++ LTE+C+ A + +PC+D
Sbjct: 65 GASLLLAAL---LLGCLVALGVQYHRDPSHSTCLTEACIRVAGKILESLDRGVSPCEDFY 121
Query: 299 PLCPPLTGSWERQRQASD 316
G W R+ D
Sbjct: 122 QFS---CGGWIRRNPLPD 136
>gi|221219050 transducin-like enhancer protein 2 isoform 3 [Homo
sapiens]
Length = 621
Score = 33.1 bits (74), Expect = 0.36
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 233 LLGSPARLASQL-----LGDELLLAKLPPSRESAFRSLGPLEAQDSLYNSPLTESCLSPA 287
L+ SPA LAS L EL+L LP S ++ +S QD+ P + S L
Sbjct: 146 LVDSPASLASSLGSPLPRAKELILNDLPASTPAS-KSCDSSPPQDASTPGPSSASHLCQL 204
Query: 288 EEEPAPCKDCQPLCPPLT 305
+PAP D L PLT
Sbjct: 205 AAKPAPSTDSVALRSPLT 222
>gi|27502386 nuclear factor of activated T-cells, cytosolic
component 1 isoform C [Homo sapiens]
Length = 930
Score = 32.0 bits (71), Expect = 0.80
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 284 LSPAEEEPAPCKDCQPLCPPLTG 306
L PA +EP + C P CPP TG
Sbjct: 838 LPPATQEPTCLQPCSPACPPATG 860
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 31.6 bits (70), Expect = 1.0
Identities = 66/276 (23%), Positives = 99/276 (35%), Gaps = 41/276 (14%)
Query: 66 SFTRLLHPPLSPGISQVVKDHVTKPTAMAQGRVAH-------------LIEWKGWSKPSD 112
S + PPL P + ++ + K ++ G+V + + K S PS
Sbjct: 664 SLKKAKKPPLPPSRTDSLR-RIPKKSSQCNGQVLNESLIATLQHSLQLSLPGKSGSSPSQ 722
Query: 113 SPAA-LESAF----SSYSDLSEGEQEARFAAGVAEQFAIAEAKLRAWSSVDGEDSTDDSY 167
SP + LE + S S +S G A SSV E + Y
Sbjct: 723 SPCSDLEEPWLPRSRSQSTVSAGSSMTSATTPNVYSLCGATPSQSDTSSVKSEYTDPWGY 782
Query: 168 DEDF----------AGGMDTDMAGQLPLGP--HLQDLFTGHRFSRP-VRQGSVEPE---- 210
D+ AGG T GP H+Q+ G R + P V GSV+P+
Sbjct: 783 YIDYTGMQEDPGNPAGGCSTSSGVPTGNGPVRHVQE---GSRATMPQVPGGSVKPKIMSP 839
Query: 211 SDCSQTVSPDTLCSSLCSLEDGLLGSPARL--ASQLLGDELLLAKLPPSRESAFRSLGPL 268
+ +SP + SS + L P L S G K+P + S S+
Sbjct: 840 EKSHRVISPSSGYSSQSNTPTALTPVPVFLKSVSPANGKGKPKPKVPERKSSLISSVSIS 899
Query: 269 EAQDSLYNSPLTESCLSPAEEEPAPCKDCQPLCPPL 304
+ SL +S TE + + +PA P PP+
Sbjct: 900 SSSTSLSSSTSTEGSGTMKKLDPAVGSPPAPPPPPV 935
>gi|171543825 gamma-glutamyltransferase 6 isoform a [Homo sapiens]
Length = 493
Score = 31.2 bits (69), Expect = 1.4
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 222 LCSSLCSLEDGLLGSPARLASQLLGDELLLAKLPPSRESAFRSLGPLEAQDSLYNSP--L 279
LC LC + LG+ AR + L L A L P+ + A +L L A D P +
Sbjct: 231 LCPLLCHADGTPLGAGARATNPQLAAVLRSAALAPTSDLAGDALLSLLAGDLGVEVPSAV 290
Query: 280 TESCLSPAEEEPAP 293
L PAE+ P P
Sbjct: 291 PRPTLEPAEQLPVP 304
>gi|171543823 gamma-glutamyltransferase 6 isoform b [Homo sapiens]
Length = 461
Score = 31.2 bits (69), Expect = 1.4
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 222 LCSSLCSLEDGLLGSPARLASQLLGDELLLAKLPPSRESAFRSLGPLEAQDSLYNSP--L 279
LC LC + LG+ AR + L L A L P+ + A +L L A D P +
Sbjct: 199 LCPLLCHADGTPLGAGARATNPQLAAVLRSAALAPTSDLAGDALLSLLAGDLGVEVPSAV 258
Query: 280 TESCLSPAEEEPAP 293
L PAE+ P P
Sbjct: 259 PRPTLEPAEQLPVP 272
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 31.2 bits (69), Expect = 1.4
Identities = 38/136 (27%), Positives = 50/136 (36%), Gaps = 20/136 (14%)
Query: 201 PVRQGSVEPESDCSQTVSPDTLCSSLCSLEDGL----LGSPARLASQLLGDELLLAKLPP 256
P G P ++V P S S E+GL L PA G+ L + LPP
Sbjct: 1511 PSEDGPGVPPPSPRRSVPPSPT-SPRASEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPP 1569
Query: 257 SRESAFRSLGPLEAQDSLYN--SPLTESCLSPAEEEPAPCKDCQPLCPPLTGSWERQRQA 314
PLE +S SPLT P + PAP P+ PP +
Sbjct: 1570 ----------PLEFSNSFEKPESPLTPGPPHPLPDTPAPATPLPPVPPPAVAA---APPT 1616
Query: 315 SDLASSGVVSLDEDEA 330
D +S + S D + A
Sbjct: 1617 LDSTASSLTSYDSEVA 1632
>gi|68299759 ecotropic viral integration site 5 [Homo sapiens]
Length = 810
Score = 30.4 bits (67), Expect = 2.3
Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 3 LATLSFLLPFAHPFGTVSCEYMLGSPLSSLAQVNLSPFSHPKVHMDPNYCHPSTSLHLCS 62
+ T F +P G + LSS + SH M PSTSLH S
Sbjct: 1 MVTNKMTAAFRNPSGKQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTS 60
Query: 63 LAWSFTRLLHPPLSPGI-SQVVKDHVTKPTAMAQGRVAHLIEWKGWSKPS------DSPA 115
S T L P LSP SQ+ D + + + L+E S S +S +
Sbjct: 61 ---SSTTLSTPALSPSSPSQLSPDDLELLAKLEEQN--RLLETDSKSLRSVNGSRRNSGS 115
Query: 116 ALESAFSSYSDLSEGEQEA 134
+L S+ S+ S+LS E+++
Sbjct: 116 SLVSSSSASSNLSHLEEDS 134
>gi|157674363 protein phosphatase 1, regulatory subunit 15A [Homo
sapiens]
Length = 674
Score = 30.4 bits (67), Expect = 2.3
Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 21/98 (21%)
Query: 99 AHLIEWKGWSKP---SDSPAA---LESAFSSYSDLSEGEQEARFAAGVAEQFAIAE---- 148
AH KG + P S +PA L+S + SD EGE +A G AE+ AE
Sbjct: 275 AHKETGKGEAAPGPQSSAPAQRPQLKSWWCQPSDEEEGEVKA---LGAAEKDGEAECPPC 331
Query: 149 -----AKLRAWSSVDGEDST---DDSYDEDFAGGMDTD 178
A L+AW GED+ D+ DED G D +
Sbjct: 332 IPPPSAFLKAWVYWPGEDTEEEEDEEEDEDSDSGSDEE 369
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 30.4 bits (67), Expect = 2.3
Identities = 37/116 (31%), Positives = 44/116 (37%), Gaps = 15/116 (12%)
Query: 201 PVRQGSVEPESDCSQTVSPDTLCSSLCSLEDGLLGSPARLASQLLGDELLLAKLPPSRES 260
P + + P + S T SP S L + L SP A L PP ES
Sbjct: 443 PPEESPLSPPPEESPT-SPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEES 501
Query: 261 AFRSLGPLEAQDSLYNSPLTESCLSPAEEEP---------APCKDCQPLCPPLTGS 307
L P +S SPL ES LSP EE P +P + PL PP S
Sbjct: 502 P---LSP--PPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEES 552
>gi|6042196 cathepsin F [Homo sapiens]
Length = 484
Score = 30.4 bits (67), Expect = 2.3
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 247 DELLLAKLPPSRESAFRSLGPLEAQDSLYNSPLTESCLSPAEEEPAPCKDCQPLCPPLTG 306
D+ + LP + SA ++LG LE +D +SC AE+ D L
Sbjct: 330 DKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVEL------ 383
Query: 307 SWERQRQASDLASSGVVSL 325
S Q+ A+ LA G +S+
Sbjct: 384 SQNEQKLAAWLAKRGPISV 402
>gi|239743064 PREDICTED: hypothetical protein XP_002342749 [Homo
sapiens]
Length = 177
Score = 30.0 bits (66), Expect = 3.0
Identities = 38/126 (30%), Positives = 50/126 (39%), Gaps = 25/126 (19%)
Query: 199 SRPVRQGSVEPESDCSQTVSPDTLC----SSLCSLEDGLLGSPARLAS-----QLLGDEL 249
+R QG E +S + V P C S+ SL DG L RL+ Q G+
Sbjct: 17 TREFPQGPREEQSKREERVEPYVACDIGLSASRSLGDGSL---VRLSECWPDWQRGGER- 72
Query: 250 LLAKLPPSRE-----SAFRSLGPLEAQDSL----YNSPLTESCLSPAEEEPAPCKDCQPL 300
K P S E SA+ + PL+ Q+ + N + E CL E P P L
Sbjct: 73 ---KNPGSEEKPLQPSAWPGINPLQPQEVVPPQAANKAVPELCLWMTEPRPVPQGSALRL 129
Query: 301 CPPLTG 306
CP G
Sbjct: 130 CPGTPG 135
>gi|83582817 small proline-rich protein 2E [Homo sapiens]
Length = 72
Score = 30.0 bits (66), Expect = 3.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 281 ESCLSPAEEEPAPCKDCQPLCPPLTGS 307
E C P +P P + CQ CPP+T S
Sbjct: 34 EPCPPPKCPQPCPPQQCQQKCPPVTPS 60
>gi|239746716 PREDICTED: hypothetical protein XP_002343819 [Homo
sapiens]
Length = 217
Score = 29.6 bits (65), Expect = 4.0
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 10 LPFAHPFGTVSCEYMLGSPLSSLAQVNLSPFSHPKVHMDPNYCHPSTSLHL-CSLAWSFT 68
+P HP S S + +++ P HP +H+ + HPST + + S+ S
Sbjct: 73 IPSIHPSIHPSIRPSTYSSIHPSTHISIHPSIHPSIHL---HIHPSTHIFIHPSIHSSIH 129
Query: 69 RLLHPPLSPGI 79
HP + P I
Sbjct: 130 ASTHPHIHPSI 140
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 29.6 bits (65), Expect = 4.0
Identities = 47/193 (24%), Positives = 70/193 (36%), Gaps = 15/193 (7%)
Query: 126 DLSEGEQEARFAAGVAEQFAIAEAKLRAWSSVDGEDSTDDSYDEDFAGGMDTDMAGQLPL 185
D G+ + + A EA + S D ED +D DED +DT
Sbjct: 945 DEERGKTQGKHRKSFALDSEGEEASQESSSEKDEEDDEEDEEDEDREEAVDTTKKETEVS 1004
Query: 186 GPHLQDLFTGHRFSRPV-RQGSVEPESDCSQTVSPDTLCSSLCSLEDGLLGSPARLASQL 244
++ + + S G + SD + S + SS S S + +S+
Sbjct: 1005 DGEDEESDSSSKCSLYADSDGENDSTSDSESSSSSSSSSSSSSSSSSSSSSSSSESSSED 1064
Query: 245 LGDELLLAKL----PPSRESAFRSLGPLE--AQDSLYNSPLT---ESCLSPAE-----EE 290
+E A L PP RE + P+E + + SP+T E SPA EE
Sbjct: 1065 EEEEERPAALPSASPPPREVPVPTPAPVEVPVPERVAGSPVTPLPEQEASPARPAGPTEE 1124
Query: 291 PAPCKDCQPLCPP 303
P +P PP
Sbjct: 1125 SPPSAPLRPPEPP 1137
>gi|153945771 endothelin converting enzyme 2 isoform D [Homo
sapiens]
Length = 811
Score = 29.6 bits (65), Expect = 4.0
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 17/115 (14%)
Query: 213 CSQTVSPDTLCS-SLCSLEDG---LLGSPARLASQLLGDELLLAKLPPSRESAFRSLGPL 268
C S LCS ++ + G LLGS +L L G LLLA L +LG
Sbjct: 74 CPHLRSISGLCSRTMVGFQKGTRQLLGSRTQLELVLAGASLLLAAL---LLGCLVALGVQ 130
Query: 269 EAQDSLYNSPLTESCLSPA-------EEEPAPCKDCQPLCPPLTGSWERQRQASD 316
+D +++ LTE+C+ A + +PC+D G W R+ D
Sbjct: 131 YHRDPSHSTCLTEACIRVAGKILESLDRGVSPCEDFYQFS---CGGWIRRNPLPD 182
>gi|14249386 zinc finger protein 496 [Homo sapiens]
Length = 587
Score = 29.6 bits (65), Expect = 4.0
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 24/77 (31%)
Query: 207 VEPESDCSQTVSPDTLCSSLCSLEDGLLGSPARLASQLLGDELL---------------- 250
VEP SD ++ + + C LG P+R SQL GD +L
Sbjct: 156 VEPHSDLAKNQDAQPITLAQC------LGLPSRPPSQLSGDPVLQDAFLLQEENVRDTQQ 209
Query: 251 --LAKLPPSRESAFRSL 265
+LPPSR S F+ +
Sbjct: 210 VTTLQLPPSRVSPFKDM 226
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 29.3 bits (64), Expect = 5.2
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 13/82 (15%)
Query: 264 SLGPLEAQDSLYNSPLTESCLSPAEEEPAPCKDC-QPLCPPLTGSWERQRQASD------ 316
S GP Q S + S + S EE + + C QP CPPL R R D
Sbjct: 4174 SCGP-RGQQSRFRSSTSGSWAPECREEQSQSQPCPQPSCPPLCLQGTRSRTLGDSWLQGE 4232
Query: 317 -----LASSGVVSLDEDEAEPE 333
GV+ D + A PE
Sbjct: 4233 CQRCSCTPEGVICEDTECAVPE 4254
>gi|16554564 caspase recruitment domain family, member 6 [Homo
sapiens]
Length = 1037
Score = 29.3 bits (64), Expect = 5.2
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 267 PLEAQDSLYNSPLTESCLS-PAEEEPAPCKDCQP 299
P + S S T+SC S P++ +P+PCK QP
Sbjct: 959 PFHSVPSQPKSSQTKSCQSQPSQTKPSPCKSTQP 992
>gi|188035910 heterochromatin protein 1-alpha [Homo sapiens]
Length = 191
Score = 28.9 bits (63), Expect = 6.8
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Query: 93 MAQGRVAHLIEWKGWS---------KPSDSPAALESAFSSYSDLSEGE 131
+ +G+V +L++WKG+S K D P + Y + EGE
Sbjct: 30 VVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYKKMKEGE 77
>gi|188035908 heterochromatin protein 1-alpha [Homo sapiens]
Length = 191
Score = 28.9 bits (63), Expect = 6.8
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Query: 93 MAQGRVAHLIEWKGWS---------KPSDSPAALESAFSSYSDLSEGE 131
+ +G+V +L++WKG+S K D P + Y + EGE
Sbjct: 30 VVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYKKMKEGE 77
>gi|6912292 heterochromatin protein 1-alpha [Homo sapiens]
Length = 191
Score = 28.9 bits (63), Expect = 6.8
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Query: 93 MAQGRVAHLIEWKGWS---------KPSDSPAALESAFSSYSDLSEGE 131
+ +G+V +L++WKG+S K D P + Y + EGE
Sbjct: 30 VVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYKKMKEGE 77
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,559,098
Number of Sequences: 37866
Number of extensions: 795715
Number of successful extensions: 2093
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 2061
Number of HSP's gapped (non-prelim): 62
length of query: 335
length of database: 18,247,518
effective HSP length: 103
effective length of query: 232
effective length of database: 14,347,320
effective search space: 3328578240
effective search space used: 3328578240
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.