LOC100288594 17482

Name: LOC100288594	Sequence: fasta or formatted (177aa)		NCBI GI: 239743064
Description: PREDICTED: hypothetical protein XP_002342749		Not currently referenced in the text
Other entries for this name: alt prot {177aa} PREDICTED: similar to hCG1998993
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 11 2 C cysteine 4.5 8 1 D aspartate 2.3 4 1 E glutamate 7.9 14 2 F phenylalanine 1.1 2 1 G glycine 10.2 18 2 H histidine 1.1 2 1 I isoleucine 1.1 2 1 K lysine 2.3 4 1 L leucine 12.4 22 2 M methionine 2.3 4 1 N asparagine 1.7 3 1 P proline 12.4 22 2 Q glutamine 6.2 11 2 R arginine 9.6 17 1 S serine 7.9 14 1 T threonine 2.3 4 1 V valine 5.1 9 2 W tryptophan 2.8 5 1 Y tyrosine 0.6 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342749 LOC100291271 0.991 PREDICTED: hypothetical protein XP_002346890 LOC100288594 0.991 PREDICTED: similar to hCG1998993 LOC100293682 0.972 PREDICTED: similar to FLJ00049 protein SF3B4 0.031 splicing factor 3b, subunit 4 IRF5 0.028 interferon regulatory factor 5 isoform d HIVEP3 0.023 human immunodeficiency virus type I enhancer bindin... HIVEP3 0.023 human immunodeficiency virus type I enhancer bindin... GLTSCR1 0.023 glioma tumor suppressor candidate region gene 1 [Ho... TCEB3CL 0.023 transcription elongation factor B polypeptide 3C-li... ARHGAP9 0.023 Rho GTPase activating protein 9 isoform 1 TCEB3C 0.023 transcription elongation factor B polypeptide 3C [H... ARHGAP9 0.023 Rho GTPase activating protein 9 isoform 2 ZNF219 0.020 zinc finger protein 219 ZNF219 0.020 zinc finger protein 219 ZNF219 0.020 zinc finger protein 219 PNPLA1 0.020 patatin-like phospholipase domain containing 1 isof... PNPLA1 0.020 patatin-like phospholipase domain containing 1 isof... PNPLA1 0.020 patatin-like phospholipase domain containing 1 isof... SRCAP 0.020 Snf2-related CBP activator protein RIN3 0.017 Ras and Rab interactor 3 ANKRD57 0.017 ankyrin repeat domain 57 IRF5 0.017 interferon regulatory factor 5 isoform a LOC100288738 0.014 PREDICTED: hypothetical protein XP_002343788 YY1AP1 0.014 YY1-associated protein isoform 2 YY1AP1 0.014 YY1-associated protein isoform 3 LOC100291948 0.014 PREDICTED: hypothetical protein XP_002345897 LOC100291512 0.014 PREDICTED: hypothetical protein XP_002346753 LOC100288180 0.014 PREDICTED: hypothetical protein XP_002342610 FAM131A 0.014 hypothetical protein LOC131408 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.