Guide to the Human Genome
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Name: GGT6 Sequence: fasta or formatted (493aa) NCBI GI: 171543825
Description:

gamma-glutamyltransferase 6 isoform a

Referenced in:

Glutathione Pathways

Other entries for this name:
alt prot [461aa] gamma-glutamyltransferase 6 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.4         66           2
 C cysteine            2.0         10           2
 D aspartate           2.8         14           2
 E glutamate           5.3         26           4
 F phenylalanine       1.8          9           1
 G glycine             9.7         48           2
 H histidine           4.3         21           2
 I isoleucine          1.0          5           2
 K lysine              0.6          3           1
 L leucine            15.2         75           4
 M methionine          0.6          3           1
 N asparagine          1.6          8           1
 P proline             9.5         47           3
 Q glutamine           4.1         20           2
 R arginine            4.3         21           2
 S serine              8.7         43           3
 T threonine           6.5         32           2
 V valine              7.1         35           2
 W tryptophan          1.0          5           1
 Y tyrosine            0.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-glutamyltransferase 6 isoform a 
GGT6                  0.917   gamma-glutamyltransferase 6 isoform b 
GGT7                  0.058   gamma-glutamyltransferase 7 
GGT1                  0.054   gamma-glutamyltransferase 1 precursor 
GGT1                  0.054   gamma-glutamyltransferase 1 precursor 
GGT1                  0.054   gamma-glutamyltransferase 1 precursor 
GGT1                  0.054   gamma-glutamyltransferase 1 precursor 
GGT2                  0.048   PREDICTED: gamma-glutamyltransferase 2 isoform 1 [H...
GGT2                  0.047   PREDICTED: gamma-glutamyltransferase 2 isoform 3 [H...
GGT5                  0.035   gamma-glutamyltransferase 5 isoform c 
GGT5                  0.033   gamma-glutamyltransferase 5 isoform a 
GGT5                  0.033   gamma-glutamyltransferase 5 isoform b 
ARAP3                 0.019   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
TAF4                  0.018   TBP-associated factor 4 
PRDM2                 0.016   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.016   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.016   retinoblastoma protein-binding zinc finger protein i...
BCORL1                0.016   BCL6 co-repressor-like 1 
MLL2                  0.015   myeloid/lymphoid or mixed-lineage leukemia 2 
PRR12                 0.015   proline rich 12 
NECAP2                0.012   NECAP endocytosis associated 2 isoform 1 
NECAP2                0.012   NECAP endocytosis associated 2 isoform 3 
SNAP91                0.011   synaptosomal-associated protein, 91kDa homolog 
TSC22D1               0.011   TSC22 domain family, member 1 isoform 1 
ASXL2                 0.011   additional sex combs like 2 
KRTAP4-9              0.010   PREDICTED: keratin associated protein 4-9 
NCAN                  0.010   chondroitin sulfate proteoglycan 3 
SRCAP                 0.010   Snf2-related CBP activator protein 
CIC                   0.010   capicua homolog 
SH3D20                0.009   SH3 domain containing 20 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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