Guide to the Human Genome
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Name: ZNF496 Sequence: fasta or formatted (587aa) NCBI GI: 14249386
Description:

zinc finger protein 496

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         32           2
 C cysteine            3.1         18           2
 D aspartate           5.3         31           2
 E glutamate          10.7         63           2
 F phenylalanine       3.2         19           1
 G glycine             5.3         31           2
 H histidine           3.2         19           1
 I isoleucine          2.2         13           2
 K lysine              4.4         26           2
 L leucine            10.2         60           2
 M methionine          0.9          5           1
 N asparagine          2.4         14           1
 P proline             9.0         53           2
 Q glutamine           7.8         46           2
 R arginine            8.0         47           2
 S serine              8.3         49           3
 T threonine           2.6         15           2
 V valine              4.8         28           2
 W tryptophan          1.2          7           1
 Y tyrosine            1.9         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 496 
ZNF202                0.229   zinc finger protein 202 
ZKSCAN4               0.184   zinc finger with KRAB and SCAN domains 4 
ZNF263                0.174   zinc finger protein 263 
ZKSCAN3               0.172   zinc finger with KRAB and SCAN domains 3 
ZNF498                0.169   zinc finger and SCAN domain containing 25 
ZKSCAN1               0.167   zinc finger protein 36 
ZNF197                0.157   zinc finger protein 197 isoform 1 
ZNF192                0.151   zinc finger protein 192 
ZKSCAN5               0.144   zinc finger with KRAB and SCAN domains 5 
ZKSCAN5               0.144   zinc finger with KRAB and SCAN domains 5 
ZNF18                 0.140   zinc finger protein 18 
ZNF500                0.139   zinc finger protein 500 
ZNF213                0.136   zinc finger protein 213 
ZNF213                0.136   zinc finger protein 213 
ZSCAN12               0.134   zinc finger and SCAN domain containing 12 
ZNF75D                0.134   zinc finger protein 75 
ZNF445                0.123   zinc finger protein 445 
ZNF174                0.120   zinc finger protein 174 isoform a 
ZNF641                0.113   zinc finger protein 641 
ZNF446                0.113   zinc finger protein 446 
ZNF7                  0.092   zinc finger protein 7 
ZNF197                0.091   zinc finger protein 197 isoform 2 
ZNF454                0.090   zinc finger protein 454 
ZNF24                 0.089   zinc finger protein 24 
ZNF323                0.088   zinc finger protein 323 
ZNF323                0.088   zinc finger protein 323 
ZNF323                0.088   zinc finger protein 323 
ZNF323                0.088   zinc finger protein 323 
ZSCAN29               0.088   zinc finger protein 690 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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