Guide to the Human Genome
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Name: FAM131A Sequence: fasta or formatted (335aa) NCBI GI: 40255251
Description:

hypothetical protein LOC131408

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         30           2
 C cysteine            3.0         10           1
 D aspartate           6.6         22           2
 E glutamate           7.8         26           3
 F phenylalanine       3.9         13           1
 G glycine             6.0         20           2
 H histidine           3.0         10           1
 I isoleucine          0.9          3           1
 K lysine              2.4          8           1
 L leucine            12.8         43           3
 M methionine          1.8          6           1
 N asparagine          0.9          3           1
 P proline             9.0         30           2
 Q glutamine           4.5         15           1
 R arginine            3.6         12           1
 S serine             14.0         47           2
 T threonine           3.9         13           1
 V valine              4.2         14           2
 W tryptophan          1.5          5           1
 Y tyrosine            1.5          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC131408 
FAM131B               0.167   hypothetical protein LOC9715 isoform b 
FAM131B               0.167   hypothetical protein LOC9715 isoform a 
FAM131C               0.120   hypothetical protein LOC348487 
TLE2                  0.020   transducin-like enhancer protein 2 isoform 2 
TLE2                  0.020   transducin-like enhancer protein 2 isoform 1 
DENND4B               0.015   DENN/MADD domain containing 4B 
UTRN                  0.012   utrophin 
ECE2                  0.012   endothelin converting enzyme 2 isoform E 
TLE2                  0.012   transducin-like enhancer protein 2 isoform 3 
NFATC1                0.011   nuclear factor of activated T-cells, cytosolic compo...
NHSL1                 0.011   NHS-like 1 
GGT6                  0.009   gamma-glutamyltransferase 6 isoform a 
GGT6                  0.009   gamma-glutamyltransferase 6 isoform b 
SHANK1                0.009   SH3 and multiple ankyrin repeat domains 1 
EVI5                  0.008   ecotropic viral integration site 5 
PPP1R15A              0.008   protein phosphatase 1, regulatory subunit 15A [Homo...
MLL2                  0.008   myeloid/lymphoid or mixed-lineage leukemia 2 
CTSF                  0.008   cathepsin F 
LOC100288594          0.008   PREDICTED: hypothetical protein XP_002342749 
SPRR2E                0.008   small proline-rich protein 2E 
LOC100288786          0.008   PREDICTED: hypothetical protein XP_002343819 
SETD1A                0.008   SET domain containing 1A 
ECE2                  0.008   endothelin converting enzyme 2 isoform D 
ZNF496                0.008   zinc finger protein 496 
SSPO                  0.006   SCO-spondin 
CARD6                 0.006   caspase recruitment domain family, member 6 
CBX5                  0.006   heterochromatin protein 1-alpha 
CBX5                  0.006   heterochromatin protein 1-alpha 
CBX5                  0.006   heterochromatin protein 1-alpha 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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