Guide to the Human Genome
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Name: GGT6 Sequence: fasta or formatted (461aa) NCBI GI: 171543823
Description:

gamma-glutamyltransferase 6 isoform b

Referenced in:

Glutathione Pathways

Other entries for this name:
alt prot [493aa] gamma-glutamyltransferase 6 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.0         60           2
 C cysteine            2.0          9           2
 D aspartate           2.8         13           2
 E glutamate           5.4         25           4
 F phenylalanine       2.0          9           1
 G glycine             9.1         42           2
 H histidine           4.1         19           2
 I isoleucine          1.1          5           2
 K lysine              0.7          3           1
 L leucine            15.2         70           4
 M methionine          0.7          3           1
 N asparagine          1.5          7           1
 P proline            10.0         46           3
 Q glutamine           4.3         20           2
 R arginine            4.3         20           2
 S serine              9.3         43           3
 T threonine           6.7         31           2
 V valine              6.3         29           2
 W tryptophan          1.1          5           1
 Y tyrosine            0.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-glutamyltransferase 6 isoform b 
GGT6                  0.981   gamma-glutamyltransferase 6 isoform a 
GGT7                  0.030   gamma-glutamyltransferase 7 
GGT1                  0.030   gamma-glutamyltransferase 1 precursor 
GGT1                  0.030   gamma-glutamyltransferase 1 precursor 
GGT1                  0.030   gamma-glutamyltransferase 1 precursor 
GGT1                  0.030   gamma-glutamyltransferase 1 precursor 
GGT2                  0.022   PREDICTED: gamma-glutamyltransferase 2 isoform 1 [H...
ARAP3                 0.020   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
GGT2                  0.019   PREDICTED: gamma-glutamyltransferase 2 isoform 3 [H...
TAF4                  0.019   TBP-associated factor 4 
PRDM2                 0.017   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.017   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.017   retinoblastoma protein-binding zinc finger protein i...
BCORL1                0.017   BCL6 co-repressor-like 1 
MLL2                  0.016   myeloid/lymphoid or mixed-lineage leukemia 2 
PRR12                 0.016   proline rich 12 
ZNF469                0.014   zinc finger protein 469 
GGT5                  0.013   gamma-glutamyltransferase 5 isoform a 
GGT5                  0.013   gamma-glutamyltransferase 5 isoform b 
SRCAP                 0.013   Snf2-related CBP activator protein 
SNAP91                0.012   synaptosomal-associated protein, 91kDa homolog 
GGT5                  0.012   gamma-glutamyltransferase 5 isoform c 
FOXL2                 0.012   forkhead box L2 
TSC22D1               0.012   TSC22 domain family, member 1 isoform 1 
ASXL2                 0.012   additional sex combs like 2 
KRTAP4-9              0.011   PREDICTED: keratin associated protein 4-9 
LBXCOR1               0.011   LBXCOR1 homolog 
CIC                   0.011   capicua homolog 
NCAN                  0.011   chondroitin sulfate proteoglycan 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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