Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 39930523
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|39930523 hypothetical protein LOC144097 [Homo sapiens]
(381 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|39930523 hypothetical protein LOC144097 [Homo sapiens] 784 0.0
gi|222144283 hypothetical protein LOC65998 [Homo sapiens] 66 5e-11
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 57 4e-08
gi|33286446 opioid growth factor receptor [Homo sapiens] 49 8e-06
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 48 1e-05
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 48 2e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 47 3e-05
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 47 3e-05
gi|150170670 piccolo isoform 2 [Homo sapiens] 46 5e-05
gi|150378539 piccolo isoform 1 [Homo sapiens] 46 5e-05
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 46 6e-05
gi|54860079 nadrin isoform 1 [Homo sapiens] 44 2e-04
gi|54860105 nadrin isoform 2 [Homo sapiens] 44 2e-04
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 44 2e-04
gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo sap... 44 2e-04
gi|118498339 EMI domain containing 2 [Homo sapiens] 44 3e-04
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 43 5e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 42 7e-04
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ... 42 0.001
gi|41281612 zinc finger protein 828 [Homo sapiens] 42 0.001
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 42 0.001
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 42 0.001
gi|12669915 E2F transcription factor 4 [Homo sapiens] 42 0.001
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 42 0.001
gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 40 0.005
gi|157785645 SPEG complex locus [Homo sapiens] 40 0.005
gi|18079216 CASK interacting protein 1 [Homo sapiens] 39 0.006
gi|5031855 lymphocyte cytosolic protein 2 [Homo sapiens] 39 0.006
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 39 0.006
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 39 0.006
>gi|39930523 hypothetical protein LOC144097 [Homo sapiens]
Length = 381
Score = 784 bits (2025), Expect = 0.0
Identities = 381/381 (100%), Positives = 381/381 (100%)
Query: 1 MALKAEGAALDCFEVTLKCEEGEDEEEAMVVAVIPRPEPMLRVTQQEKTPPPRPSPLEAG 60
MALKAEGAALDCFEVTLKCEEGEDEEEAMVVAVIPRPEPMLRVTQQEKTPPPRPSPLEAG
Sbjct: 1 MALKAEGAALDCFEVTLKCEEGEDEEEAMVVAVIPRPEPMLRVTQQEKTPPPRPSPLEAG 60
Query: 61 SDGCEEPKQQVSWEQEFLVGSSPGGSGRALCMVCGAEIRAPSADTARSHILEQHPHTLDL 120
SDGCEEPKQQVSWEQEFLVGSSPGGSGRALCMVCGAEIRAPSADTARSHILEQHPHTLDL
Sbjct: 61 SDGCEEPKQQVSWEQEFLVGSSPGGSGRALCMVCGAEIRAPSADTARSHILEQHPHTLDL 120
Query: 121 SPSEKSNILEAWSEGVALLQDVRAEQPSPPNSDSGQDAHPDPDANPDAARMPAEIVVLLD 180
SPSEKSNILEAWSEGVALLQDVRAEQPSPPNSDSGQDAHPDPDANPDAARMPAEIVVLLD
Sbjct: 121 SPSEKSNILEAWSEGVALLQDVRAEQPSPPNSDSGQDAHPDPDANPDAARMPAEIVVLLD 180
Query: 181 SEDNPSLPKRSRPRGLRPLELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNL 240
SEDNPSLPKRSRPRGLRPLELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNL
Sbjct: 181 SEDNPSLPKRSRPRGLRPLELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNL 240
Query: 241 DPDPEPPSPDSPTETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAE 300
DPDPEPPSPDSPTETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAE
Sbjct: 241 DPDPEPPSPDSPTETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAE 300
Query: 301 GGLPRAESPSPAPPPGLRGTLDLQVIRVRMEEPPAVSLLQDWSRHPQGTKRVGAGDTSDW 360
GGLPRAESPSPAPPPGLRGTLDLQVIRVRMEEPPAVSLLQDWSRHPQGTKRVGAGDTSDW
Sbjct: 301 GGLPRAESPSPAPPPGLRGTLDLQVIRVRMEEPPAVSLLQDWSRHPQGTKRVGAGDTSDW 360
Query: 361 PTVLSESSTTVAGKPEKGNGV 381
PTVLSESSTTVAGKPEKGNGV
Sbjct: 361 PTVLSESSTTVAGKPEKGNGV 381
>gi|222144283 hypothetical protein LOC65998 [Homo sapiens]
Length = 678
Score = 66.2 bits (160), Expect = 5e-11
Identities = 48/142 (33%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
Query: 20 EEGEDEEEAMVVAVIPRPEPMLRVTQQEKTPPPRPSPLEAGSDGCEEPKQQVSWEQEFLV 79
EE EDEE+ + P P PPP P P + + Q W E+L+
Sbjct: 544 EEEEDEEDGQEPGGLALPPP----------PPPPPPPPPRSRE--QRRNYQPRWRGEYLM 591
Query: 80 GSSPGGSGRAL-CMVCGAEIRAPSADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVAL 138
GS R L CMVCG + T + HIL+ HP ++D +P E+ ILEA+ E A
Sbjct: 592 DYD--GSRRGLVCMVCGGALATLKVSTIKRHILQVHPFSMDFTPEERQTILEAYEE--AA 647
Query: 139 LQDVRAE---QPSPPNSDSGQD 157
L+ E P+P D G D
Sbjct: 648 LRCYGHEGFGPPAPAPRDGGAD 669
Score = 50.8 bits (120), Expect = 2e-06
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 19/114 (16%)
Query: 76 EFLVGSSPGGSGRALCMVCGAEIRAPSADTARSHILEQHPHTLDLSPSEKSNILEAWSEG 135
E L+ P G+ R +CM CG + + D R+H+LE HP +L LS ++S +L+AW
Sbjct: 271 ECLMDYDPRGN-RLVCMACGRALPSLHLDDIRAHVLEVHPGSLGLSGPQRSALLQAWGGQ 329
Query: 136 VALLQDVRAEQP-----------------SPPNSDSGQDAHPDPDANPDAARMP 172
L ++ P S + S QD P PD +A +P
Sbjct: 330 PEALSELTQSPPGDDLAPQDLTGKSRDSASAAGAPSSQDLSP-PDVKEEAGWVP 382
Score = 50.4 bits (119), Expect = 3e-06
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 73 WEQEFLVGSSPGGSGRALCMVCGAEIRAPSADTARSHILEQHPHTLDLSPSEKSNILEAW 132
W E+L+ +P G +CMVCG+ + T + HI ++HP++L SP EK I +W
Sbjct: 109 WRLEYLMDFNPARHGM-VCMVCGSSLATLKLSTIKRHIRQKHPYSLHWSPREKEVISNSW 167
Query: 133 SEGVAL 138
+ L
Sbjct: 168 DAHLGL 173
Score = 49.3 bits (116), Expect = 6e-06
Identities = 60/224 (26%), Positives = 84/224 (37%), Gaps = 21/224 (9%)
Query: 25 EEEAMVVAVIPRP---EPMLRVTQQEKTPPPRPSPLEAGSDGCEEPKQQVSWEQEFLVGS 81
+EEA V P P E L + E+ P SP G P+++ W E+L+
Sbjct: 375 KEEAGWVPERPGPAEEEEELEEGEGERAGVPGRSP--RGRAHRRHPQER--WRLEYLM-E 429
Query: 82 SPGGSGRALCMVCGAEIRAPSADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQD 141
GG +C VCG + + T HI +HP + L ++ I WSE A L
Sbjct: 430 LDGGRRGLVCGVCGGALASLKMSTIERHIRRRHPGSTRLGGPVQALIAREWSEKAAHLLA 489
Query: 142 VRAEQPSPPNS--DSGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPL 199
+ +P P G A D + D P E + E+ +P PL
Sbjct: 490 LGPPRPESPQGPIPPGTAAASD-EGGGDEEEEPEE-----EEEEWGDVPLSPG----APL 539
Query: 200 ELPA-VPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDP 242
E PA E ++P G PP P R R +N P
Sbjct: 540 ERPAEEEEDEEDGQEPGGLALPPPPPPPPPPPPRSREQRRNYQP 583
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 56.6 bits (135), Expect = 4e-08
Identities = 84/351 (23%), Positives = 118/351 (33%), Gaps = 55/351 (15%)
Query: 44 TQQEKTPPPRPSPLEAGSDGCEEPK-----------QQVSWEQEFLVGSSPGGSGRALCM 92
T++ ++P P P P + EE K Q+ + ++ SS GS +
Sbjct: 445 TEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSS--- 501
Query: 93 VCGAEIRAPSADTARSHILE-------QHPHTLDLSPSEKSNILEAWSEGVALLQDVRAE 145
+E P RSH+ +H + SPS + E G R
Sbjct: 502 ---SEDERPK----RSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGR------RRR 548
Query: 146 QPSPPNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLELPAVP 205
PSPP + + P P P R P PS P R R R P
Sbjct: 549 SPSPPPTRRRRSPSPAPP--PRRRRTPTPP----PRRRTPSPPPRRRSPSPRRYSPPIQR 602
Query: 206 ATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSPTETFAAPAEVRHF 265
P P +R PP R P + + P P SP +P+
Sbjct: 603 RYSPS--PPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKH 660
Query: 266 TDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAESPSPAPPPGLRGTLDLQV 325
GS P+ + S P+ + SP R PRA S +PPP RG
Sbjct: 661 RKGSSPSRSTREARSPQ----PNKRHSPSPR-------PRAPQTSSSPPPVRRGASSSP- 708
Query: 326 IRVRMEEPPAVSLLQDWSRHPQGTKRVGAGDTSDWPTVLSESSTTVAGKPE 376
+ R P+ ++ SR P+ K A S SS +V+G PE
Sbjct: 709 -QRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPE 758
Score = 31.6 bits (70), Expect = 1.2
Identities = 67/302 (22%), Positives = 103/302 (34%), Gaps = 60/302 (19%)
Query: 36 RPEPMLRVTQQEKTPPPR--PSPLEAGSDGCEEPKQQVSWEQEFLVGSSPGGSGRALCMV 93
RP P R + + +TPP R P P S P ++ L GSS
Sbjct: 314 RPSPRRRPSPRRRTPPRRMPPPPRHRRS---RSPVRRRRRSSASLSGSSS---------- 360
Query: 94 CGAEIRAPSADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQDVRAEQPSPPNSD 153
S+ ++RS + P SP K+ L + R +PSPP +
Sbjct: 361 --------SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPR-----RRHRPSPPATP 407
Query: 154 SGQDAH-PDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLELPAVPATEPG-- 210
+ H P P + + + + K ++ +G E P+ PA +P
Sbjct: 408 PPKTRHSPTPQQSNRTRKSRVSV------SPGRTSGKVTKHKGTEKRESPS-PAPKPRKV 460
Query: 211 ----NKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDS-PTETFAAPAEV--- 262
+++ +G + + R+ R + + D S D P + EV
Sbjct: 461 ELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRR 520
Query: 263 -RHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLP---RAESPSPAPPPGLR 318
RH S + R + SP+ R P R SPSPAPPP R
Sbjct: 521 RRHSPSRS----------ASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRR 570
Query: 319 GT 320
T
Sbjct: 571 RT 572
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 48.9 bits (115), Expect = 8e-06
Identities = 72/306 (23%), Positives = 106/306 (34%), Gaps = 52/306 (16%)
Query: 36 RPEPM---------LRVTQQEKTPPPRPSPLEAGS--------DGCEEPKQQVSWEQEFL 78
RPEP+ L ++++E+ PP P P A +GC + + + +
Sbjct: 373 RPEPLSPKESKKRKLELSRREQ-PPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEV 431
Query: 79 VGSSPGGSGRALCMVCGAEIRAPSADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVAL 138
G PG + + GA + AD R +D + + + ++ +AL
Sbjct: 432 GGQDPGEAVQPCRQPLGARV----ADKVRKR------RKVDEGAGDSAAVASGGAQTLAL 481
Query: 139 LQDVRAEQPSPPNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRP 198
A P+P + + + + P E SE P P + P G P
Sbjct: 482 -----AGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSE-TPG-PSPAGPAGDEP 534
Query: 199 LELPA-VPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSPTETFA 257
E P+ P P P G E P E P + G + + E P P T
Sbjct: 535 AESPSETPGPRPAG--PAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRD 592
Query: 258 APAEVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKD----REVAEGGLPRAESPSPAP 313
PAE T G PAG G + +SP + R G AESPS P
Sbjct: 593 EPAESPSETPGPRPAG----------PAGDEPAESPSETPGPRPAGPAGDEPAESPSETP 642
Query: 314 PPGLRG 319
P G
Sbjct: 643 GPSPAG 648
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 48.1 bits (113), Expect = 1e-05
Identities = 56/198 (28%), Positives = 70/198 (35%), Gaps = 40/198 (20%)
Query: 147 PSPPNS-DSGQDAHPDPDANPDAARMPAEIVV-----------LLDSEDNPSLPKRSRPR 194
PSPP S A P P A P A P + + S P P + P
Sbjct: 770 PSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPP 829
Query: 195 GLRP------LELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPS 248
P L++P P P + PR PP P G +T L P P PP
Sbjct: 830 QAPPVLAAPLLQVPPSPPASPTLQAPR-----RPPTPGPDTSVSGPRLTLALAPGPPPPP 884
Query: 249 PDSPTETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDS-------KDSPKDREVAEG 301
SP+ T + P H + + + +LRG DS P D E+A
Sbjct: 885 SRSPSSTLSGPDLAGHSSSAT---------STPEELRGYDSGPEGGAAASPPPDAELA-A 934
Query: 302 GLPRAESPSPAPPPGLRG 319
P A S PAPP RG
Sbjct: 935 CHPAAWSRGPAPPLAFRG 952
Score = 33.1 bits (74), Expect = 0.43
Identities = 46/206 (22%), Positives = 70/206 (33%), Gaps = 20/206 (9%)
Query: 148 SPPNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPR-GLRPLELPAVPA 206
+PP A P P A P A P + + + P ++ P L PL+ P P
Sbjct: 578 TPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPP 637
Query: 207 TEP-----GNKKPRG---------QRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSP 252
P P+ Q PP PV+ P + + P PPS +P
Sbjct: 638 ASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPS-QAP 696
Query: 253 TETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAESPSPA 312
A P +V S PA + + + P +P + SPS
Sbjct: 697 PSLAAPPLQV----PPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSAT 752
Query: 313 PPPGLRGTLDLQVIRVRMEEPPAVSL 338
PPP + L ++V P ++ +
Sbjct: 753 PPPRVPPLLAAPPLQVPPSPPASLPM 778
Score = 29.3 bits (64), Expect = 6.2
Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 22/96 (22%)
Query: 185 PSLPKRSRPRGLRPLELP--------AVPATEPGNKKPRGQRWKEPPGEE----PVRKKR 232
P+ P + +P+GL+ L P A PA P + P P G + P
Sbjct: 266 PAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLAT--PSPSGTKARPVPPPDNA 323
Query: 233 GRPMTKNLDPDP--------EPPSPDSPTETFAAPA 260
P+ L P P PPSP +P P+
Sbjct: 324 ATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPS 359
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 47.8 bits (112), Expect = 2e-05
Identities = 58/231 (25%), Positives = 84/231 (36%), Gaps = 44/231 (19%)
Query: 36 RPEPMLRVTQQEKTPPPRPSPLEAGSDGCEEPKQQVSWEQEFLVGSSPGGSGRALCMVCG 95
RP + Q+E PPP S +GS P G G
Sbjct: 1563 RPPRKPELLQEESLPPPHSSGF---------------------LGSKPEGPGPQ------ 1595
Query: 96 AEIRAPSADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQDVRAEQPSPPNSDSG 155
AE R + HI + HT S + + +E W E ++ +DV + S SDSG
Sbjct: 1596 AESRDTGTEALTPHIWNRL-HTATSRKSYRPSSMEPWMEPLSPFEDVAGTEMS--QSDSG 1652
Query: 156 QDAHPDP--DANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLELP--------AVP 205
D D + P + R + + +E P P S P P E P P
Sbjct: 1653 VDLSGDSQVSSGPCSQRSSPDGGLKGAAEGPPKRPGGSSPLNAVPCEGPPGSEPPRRPPP 1712
Query: 206 ATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPS--PDSPTE 254
A G++K + PPG P+ +R + + +P P PS P P +
Sbjct: 1713 APHDGDRKELPREQPLPPG--PIGTERSQRTDRGTEPGPIRPSHRPGPPVQ 1761
Score = 36.2 bits (82), Expect = 0.050
Identities = 44/156 (28%), Positives = 61/156 (39%), Gaps = 24/156 (15%)
Query: 100 APSADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQDVRAEQPSPPNSDSGQDAH 159
AP +R + E P L P S+ VA +Q ++ PP ++ Q
Sbjct: 846 APGPPISRFPLEEPGPRPLPWPPG---------SDEVAKIQTPPPKK-EPPKEETAQLT- 894
Query: 160 PDPDANPDAARMPAEIVVLLDSEDNPSLPKR-SRPR---GLRP-LELPAVPATEPGNKKP 214
P+A R PA V P P+R SR G RP +P EPG
Sbjct: 895 -----GPEAGRKPARGVG--SGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPR 947
Query: 215 RGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPD 250
R K+PP V + +P+ + D P+PP PD
Sbjct: 948 RAGPIKKPPPPTKVEELPPKPLEQG-DETPKPPKPD 982
Score = 32.7 bits (73), Expect = 0.56
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Query: 227 PVRKKRGRPMTKNLDPDPEPPSPDSPTETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRG 286
P K R RP + P PP P S + F + S PAG L + +G
Sbjct: 1434 PSPKNRSRPPEERPPGLPLPPPPPSSSAVFRLDQVIH-----SNPAGIQQALAQLSSRQG 1488
Query: 287 PDSKDSPKDREVAEGGLPRA-ESPSPAPP 314
S +P + GLP+A + PSP PP
Sbjct: 1489 --SVTAPGGHPRHKPGLPQAPQGPSPRPP 1515
Score = 32.3 bits (72), Expect = 0.73
Identities = 43/176 (24%), Positives = 62/176 (35%), Gaps = 21/176 (11%)
Query: 189 KRSRPRGLRPLELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPS 248
KR + P P+ PA P K PP P P T+ +P PP+
Sbjct: 502 KRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPT------PETEPEEPAQAPPA 555
Query: 249 PDSPTETFAAP-------AEVRHFTDGSFPAGFV-LQLFSH------TQLRGPDSKDSPK 294
+PT AA + GSF A V QL S ++ P + PK
Sbjct: 556 QSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKEGPEPPEEVPPPTTPPVPK 615
Query: 295 DREVAEGGLPRAESPSPA-PPPGLRGTLDLQVIRVRMEEPPAVSLLQDWSRHPQGT 349
+G P + PS P + +L + R + E+ W +H QG+
Sbjct: 616 VEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLLKQQQQHQWQQHQQGS 671
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 47.0 bits (110), Expect = 3e-05
Identities = 54/199 (27%), Positives = 70/199 (35%), Gaps = 39/199 (19%)
Query: 145 EQPSPPNSDSGQDAHPDPDANPDAARMPAEIVV-----------LLDSEDNPSLPKRSRP 193
+ P P + Q A P P A P A P + + S P P + P
Sbjct: 500 QAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPP 559
Query: 194 RGLRP------LELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPP 247
P L++P P P + PR PP P G +T L P P PP
Sbjct: 560 PQAPPVLAAPLLQVPPSPPASPTLQAPR-----RPPTPGPDTSVSGPRLTLALAPGPPPP 614
Query: 248 SPDSPTETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDS-------KDSPKDREVAE 300
SP+ T + P H + + + +LRG DS P D E+A
Sbjct: 615 PSRSPSSTLSGPDLAGHSSSAT---------STPEELRGYDSGPEGGAAASPPPDAELA- 664
Query: 301 GGLPRAESPSPAPPPGLRG 319
P A S PAPP RG
Sbjct: 665 ACHPAAWSRGPAPPLAFRG 683
Score = 40.4 bits (93), Expect = 0.003
Identities = 71/308 (23%), Positives = 100/308 (32%), Gaps = 60/308 (19%)
Query: 35 PRPEPMLRVTQQEKTPP-----PRPSPLEAGSDGCEEPKQQVSWEQEFLVGSSPGGSGRA 89
P+P+ + + + TPP P PL + P + + + ++P S
Sbjct: 272 PKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLT 331
Query: 90 LCMVCGAEIRAPSADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQDVRAEQPSP 149
+ + PS S L+ P PS+ + L G LQ + PSP
Sbjct: 332 CQLATPLPLAPPSPSAPPS--LQTLPSPPATPPSQATTSL-----GSPTLQATHSFLPSP 384
Query: 150 PNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLELPAVPATEP 209
P S A P P A P A P + P P S P L PL P+ P
Sbjct: 385 PLSPL---ATPPPQAPPALALPPLQA---------PPSPPASPP--LSPLATPS-PQAPN 429
Query: 210 GNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSPTETFAAPAEVRHFTDGS 269
Q PP PV+ P + + P PPS +P A P +V S
Sbjct: 430 ALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPS-QAPPSLAAPPLQVPPSPPAS 488
Query: 270 FPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAESPSPAPPPGLRGTLDLQVIRVR 329
P P A P APPP LQ+ +
Sbjct: 489 PPMS------------------------------PSATPPPQAPPP--LAAPPLQLAKPP 516
Query: 330 MEEPPAVS 337
+ PPA++
Sbjct: 517 PQAPPALA 524
Score = 34.3 bits (77), Expect = 0.19
Identities = 54/213 (25%), Positives = 73/213 (34%), Gaps = 28/213 (13%)
Query: 136 VALLQDVRAEQPSPPN-----SDSGQDAHPDPDANPDAARMPAEIVVL-------LDSED 183
V L + + +P PP S S H + +P A R P+ L L S
Sbjct: 187 VGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSA 246
Query: 184 NP-SLPKRSRPRGLRPLELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDP 242
P S P RS P PA P KP+G + PP P RK P L
Sbjct: 247 TPLSSPARSGPSARGTPRAPA----HPSQPKPKGLQALRPPQVTPPRKD-AAPALGPLSS 301
Query: 243 DP-EPPSPDSPTETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEG 301
P PSP + ++ A P + QL + L P S +P +
Sbjct: 302 SPLATPSPSAALQSQAPPT----LPATPHSSSLTCQLATPLPL-APPSPSAPPSLQT--- 353
Query: 302 GLPRAESPSPAPPPGLRGTLDLQVIRVRMEEPP 334
LP + P+ G+ LQ + PP
Sbjct: 354 -LPSPPATPPSQATTSLGSPTLQATHSFLPSPP 385
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 47.0 bits (110), Expect = 3e-05
Identities = 54/199 (27%), Positives = 70/199 (35%), Gaps = 39/199 (19%)
Query: 145 EQPSPPNSDSGQDAHPDPDANPDAARMPAEIVV-----------LLDSEDNPSLPKRSRP 193
+ P P + Q A P P A P A P + + S P P + P
Sbjct: 461 QAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPP 520
Query: 194 RGLRP------LELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPP 247
P L++P P P + PR PP P G +T L P P PP
Sbjct: 521 PQAPPVLAAPLLQVPPSPPASPTLQAPR-----RPPTPGPDTSVSGPRLTLALAPGPPPP 575
Query: 248 SPDSPTETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDS-------KDSPKDREVAE 300
SP+ T + P H + + + +LRG DS P D E+A
Sbjct: 576 PSRSPSSTLSGPDLAGHSSSAT---------STPEELRGYDSGPEGGAAASPPPDAELA- 625
Query: 301 GGLPRAESPSPAPPPGLRG 319
P A S PAPP RG
Sbjct: 626 ACHPAAWSRGPAPPLAFRG 644
Score = 36.2 bits (82), Expect = 0.050
Identities = 38/134 (28%), Positives = 51/134 (38%), Gaps = 20/134 (14%)
Query: 136 VALLQDVRAEQPSPPN-----SDSGQDAHPDPDANPDAARMPAEIVVL-------LDSED 183
V L + + +P PP S S H + +P A R P+ L L S
Sbjct: 178 VGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSA 237
Query: 184 NP-SLPKRSRPRGLRPLELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRG---RPMTKN 239
P S P RS P PA P KP+G + PP P RK P++ +
Sbjct: 238 TPLSSPARSGPSARGTPRAPA----HPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSS 293
Query: 240 LDPDPEPPSPDSPT 253
P P +P SP+
Sbjct: 294 PLATPSPSAPPSPS 307
Score = 33.5 bits (75), Expect = 0.33
Identities = 53/205 (25%), Positives = 66/205 (32%), Gaps = 48/205 (23%)
Query: 133 SEGVALLQDVRAEQPSPPNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSR 192
S G LQ + PSPP S A P P A P A P + P P S
Sbjct: 329 SLGSPTLQATHSFLPSPPLSPL---ATPPPQAPPALALPPLQA---------PPSPPASP 376
Query: 193 PRGLRPLELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSP 252
P L PL P+ P Q PP PV+ P + + P PPS +P
Sbjct: 377 P--LSPLATPS-PQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPS-QAP 432
Query: 253 TETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAESPSPA 312
A P +V S P P A P A
Sbjct: 433 PSLAAPPLQVPPSPPASPPMS------------------------------PSATPPPQA 462
Query: 313 PPPGLRGTLDLQVIRVRMEEPPAVS 337
PPP LQ+ + + PPA++
Sbjct: 463 PPP--LAAPPLQLAKPPPQAPPALA 485
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 46.2 bits (108), Expect = 5e-05
Identities = 62/309 (20%), Positives = 113/309 (36%), Gaps = 27/309 (8%)
Query: 20 EEGEDEEEAMVVAVIPRPEPMLRVTQQEKTPPPRPSPLEAGSDGCEEP--KQQVSWEQEF 77
+E +++ +V +PE +++ Q++ P P P G D ++ + +S +Q
Sbjct: 186 QEETTKKQKVVQKEQGKPEGIIKPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPE 245
Query: 78 LVGSSPGGSGRALCMVCGAEIRAPSADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVA 137
+ S P G+G+ I+ P+ H +++++I+ S +
Sbjct: 246 KIKSQPPGTGKP--------IQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPS 297
Query: 138 LLQDVRA--EQPSPPNSDSGQDAHPDPDANPDAARMPAE---IVVLLDSEDNPSLPKRSR 192
L + +QP+P + Q H + P A+ PA+ + L + P
Sbjct: 298 LPSPSKPPIQQPTPGKPPAQQPGHEK--SQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQP 355
Query: 193 PRGLRPLELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSP 252
P +P P PA P + ++P E+P K +P P +P P
Sbjct: 356 PGTTKPPAQPLGPAKPPAQQTGS----EKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPP 411
Query: 253 TETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPD----SKDSPKDREVAEGG--LPRA 306
T+ P + PA + Q GP + P + G P +
Sbjct: 412 TQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPS 471
Query: 307 ESPSPAPPP 315
+ P PA PP
Sbjct: 472 QLPGPAKPP 480
Score = 39.3 bits (90), Expect = 0.006
Identities = 57/240 (23%), Positives = 90/240 (37%), Gaps = 33/240 (13%)
Query: 150 PNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLELPAVPATEP 209
P SDS +HP P + + V E + K S +P+ P T P
Sbjct: 824 PASDSKIISHPGPSSESKGQKQVDP--VQKKEEPKKAQTKMSPKPDAKPM--PKGSPTPP 879
Query: 210 GNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPS--PDSPTETFAAPAEVRHFTD 267
G + GQ P + P +++ R + NL + P P +P ET + F
Sbjct: 880 GPRPTAGQTVPTPQ-QSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTG----KLFGF 934
Query: 268 GSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAESPSPAPPPGLRG-------- 319
G+ L S GP S+ P G P ++P+P+ PP +G
Sbjct: 935 GASIFSQASNLISTAGQPGPHSQSGP--------GAPMKQAPAPSQPPTSQGPPKSTGQA 986
Query: 320 -TLDLQVIRVRME-EPPAVSLLQDWSRHPQGTKRVGAGDTSDWPTVLSESSTTVAGKPEK 377
+ I V+ E + PA L+ + KR +T P + +S + A +P+K
Sbjct: 987 PPAPAKSIPVKKETKAPAAEKLEPKAEQAPTVKRT---ETEKKPPPIKDSKSLTA-EPQK 1042
Score = 34.7 bits (78), Expect = 0.15
Identities = 57/261 (21%), Positives = 95/261 (36%), Gaps = 49/261 (18%)
Query: 39 PMLRVTQQEKTPPPRPSPLEAGSDGCEEPKQQVSWEQEFLVGSSPGGSGRALCMVCGAEI 98
P ++ T+ EK PPP ++ EP++ V + + SP + C +C E+
Sbjct: 1016 PTVKRTETEKKPPP----IKDSKSLTAEPQKAVLPTK---LEKSP--KPESTCPLCKTEL 1066
Query: 99 RAPSADTAR----SHILEQHPHTLDLSPSEKSNILEAW-------SEGVA-LLQDVRAEQ 146
S D + Q + +P+ ++ W ++ L D+R
Sbjct: 1067 NIGSKDPPNFNTCTECKNQVCNLCGFNPTPHLTEIQEWLCLNCQTQRAISGQLGDIRKMP 1126
Query: 147 PSP----------PNSDSGQDAHPDPDAN-----PDAARMPAEIVVL------LDSEDNP 185
P+P P S Q P + AE V+L L E P
Sbjct: 1127 PAPSGPKASPMPVPTESSSQKTAVPPQVKLVKKQEQEVKTEAEKVILEKVKETLSMEKIP 1186
Query: 186 SLPKRSRPRGLRPLELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPE 245
+ + + LE A + KKP + K P EE +R + +P+ + P PE
Sbjct: 1187 PMVTTDQKQEESKLEKDKASALQ--EKKPLPEEKKLIPEEEKIRSEEKKPLLEEKKPTPE 1244
Query: 246 PPS--PDSPTETFAAPAEVRH 264
P++ T +AP E +H
Sbjct: 1245 DKKLLPEAKT---SAPEEQKH 1262
Score = 33.1 bits (74), Expect = 0.43
Identities = 47/212 (22%), Positives = 78/212 (36%), Gaps = 21/212 (9%)
Query: 50 PPPRPSPLE---AGSDGCEEPKQQVSWEQEFLVGSSPGGSGRALCMVCGAEIRAPSADTA 106
PP +PS L A G +P Q + + P G + G+E PS++
Sbjct: 331 PPAQPSGLTKPLAQQPGTVKPPVQPPGTTK--PPAQPLGPAKPPAQQTGSE--KPSSEQP 386
Query: 107 RSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQDVRAEQPSPPNSDSGQDAHPDPDANP 166
L Q P + +P+++ + ++ V + + A+QP + P P
Sbjct: 387 GPKALAQPPG-VGKTPAQQPGPAKPPTQQVGTPKPL-AQQPGLQSPAKAPGPTKTPVQQP 444
Query: 167 DAARMPAEIV---VLLDSEDNPSLPKRSRPRGLRPLELPAVPATEPGNKKPRGQRWKEPP 223
++PA+ + P+ P P +P P +PG KP Q +P
Sbjct: 445 GPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKP------PPQQPGPAKPPPQ---QPG 495
Query: 224 GEEPVRKKRGRPMTKNLDPDPEPPSPDSPTET 255
+P ++ G P P PSP P T
Sbjct: 496 SAKPPSQQPGSTKPPPQQPGPAKPSPQQPGST 527
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 46.2 bits (108), Expect = 5e-05
Identities = 62/309 (20%), Positives = 113/309 (36%), Gaps = 27/309 (8%)
Query: 20 EEGEDEEEAMVVAVIPRPEPMLRVTQQEKTPPPRPSPLEAGSDGCEEP--KQQVSWEQEF 77
+E +++ +V +PE +++ Q++ P P P G D ++ + +S +Q
Sbjct: 186 QEETTKKQKVVQKEQGKPEGIIKPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPE 245
Query: 78 LVGSSPGGSGRALCMVCGAEIRAPSADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVA 137
+ S P G+G+ I+ P+ H +++++I+ S +
Sbjct: 246 KIKSQPPGTGKP--------IQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPS 297
Query: 138 LLQDVRA--EQPSPPNSDSGQDAHPDPDANPDAARMPAE---IVVLLDSEDNPSLPKRSR 192
L + +QP+P + Q H + P A+ PA+ + L + P
Sbjct: 298 LPSPSKPPIQQPTPGKPPAQQPGHEK--SQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQP 355
Query: 193 PRGLRPLELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSP 252
P +P P PA P + ++P E+P K +P P +P P
Sbjct: 356 PGTTKPPAQPLGPAKPPAQQTGS----EKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPP 411
Query: 253 TETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPD----SKDSPKDREVAEGG--LPRA 306
T+ P + PA + Q GP + P + G P +
Sbjct: 412 TQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPS 471
Query: 307 ESPSPAPPP 315
+ P PA PP
Sbjct: 472 QLPGPAKPP 480
Score = 39.3 bits (90), Expect = 0.006
Identities = 57/240 (23%), Positives = 90/240 (37%), Gaps = 33/240 (13%)
Query: 150 PNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLELPAVPATEP 209
P SDS +HP P + + V E + K S +P+ P T P
Sbjct: 824 PASDSKIISHPGPSSESKGQKQVDP--VQKKEEPKKAQTKMSPKPDAKPM--PKGSPTPP 879
Query: 210 GNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPS--PDSPTETFAAPAEVRHFTD 267
G + GQ P + P +++ R + NL + P P +P ET + F
Sbjct: 880 GPRPTAGQTVPTPQ-QSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTG----KLFGF 934
Query: 268 GSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAESPSPAPPPGLRG-------- 319
G+ L S GP S+ P G P ++P+P+ PP +G
Sbjct: 935 GASIFSQASNLISTAGQPGPHSQSGP--------GAPMKQAPAPSQPPTSQGPPKSTGQA 986
Query: 320 -TLDLQVIRVRME-EPPAVSLLQDWSRHPQGTKRVGAGDTSDWPTVLSESSTTVAGKPEK 377
+ I V+ E + PA L+ + KR +T P + +S + A +P+K
Sbjct: 987 PPAPAKSIPVKKETKAPAAEKLEPKAEQAPTVKRT---ETEKKPPPIKDSKSLTA-EPQK 1042
Score = 34.7 bits (78), Expect = 0.15
Identities = 57/261 (21%), Positives = 95/261 (36%), Gaps = 49/261 (18%)
Query: 39 PMLRVTQQEKTPPPRPSPLEAGSDGCEEPKQQVSWEQEFLVGSSPGGSGRALCMVCGAEI 98
P ++ T+ EK PPP ++ EP++ V + + SP + C +C E+
Sbjct: 1016 PTVKRTETEKKPPP----IKDSKSLTAEPQKAVLPTK---LEKSP--KPESTCPLCKTEL 1066
Query: 99 RAPSADTAR----SHILEQHPHTLDLSPSEKSNILEAW-------SEGVA-LLQDVRAEQ 146
S D + Q + +P+ ++ W ++ L D+R
Sbjct: 1067 NIGSKDPPNFNTCTECKNQVCNLCGFNPTPHLTEIQEWLCLNCQTQRAISGQLGDIRKMP 1126
Query: 147 PSP----------PNSDSGQDAHPDPDAN-----PDAARMPAEIVVL------LDSEDNP 185
P+P P S Q P + AE V+L L E P
Sbjct: 1127 PAPSGPKASPMPVPTESSSQKTAVPPQVKLVKKQEQEVKTEAEKVILEKVKETLSMEKIP 1186
Query: 186 SLPKRSRPRGLRPLELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPE 245
+ + + LE A + KKP + K P EE +R + +P+ + P PE
Sbjct: 1187 PMVTTDQKQEESKLEKDKASALQ--EKKPLPEEKKLIPEEEKIRSEEKKPLLEEKKPTPE 1244
Query: 246 PPS--PDSPTETFAAPAEVRH 264
P++ T +AP E +H
Sbjct: 1245 DKKLLPEAKT---SAPEEQKH 1262
Score = 33.1 bits (74), Expect = 0.43
Identities = 47/212 (22%), Positives = 78/212 (36%), Gaps = 21/212 (9%)
Query: 50 PPPRPSPLE---AGSDGCEEPKQQVSWEQEFLVGSSPGGSGRALCMVCGAEIRAPSADTA 106
PP +PS L A G +P Q + + P G + G+E PS++
Sbjct: 331 PPAQPSGLTKPLAQQPGTVKPPVQPPGTTK--PPAQPLGPAKPPAQQTGSE--KPSSEQP 386
Query: 107 RSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQDVRAEQPSPPNSDSGQDAHPDPDANP 166
L Q P + +P+++ + ++ V + + A+QP + P P
Sbjct: 387 GPKALAQPPG-VGKTPAQQPGPAKPPTQQVGTPKPL-AQQPGLQSPAKAPGPTKTPVQQP 444
Query: 167 DAARMPAEIV---VLLDSEDNPSLPKRSRPRGLRPLELPAVPATEPGNKKPRGQRWKEPP 223
++PA+ + P+ P P +P P +PG KP Q +P
Sbjct: 445 GPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKP------PPQQPGPAKPPPQ---QPG 495
Query: 224 GEEPVRKKRGRPMTKNLDPDPEPPSPDSPTET 255
+P ++ G P P PSP P T
Sbjct: 496 SAKPPSQQPGSTKPPPQQPGPAKPSPQQPGST 527
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 45.8 bits (107), Expect = 6e-05
Identities = 91/342 (26%), Positives = 116/342 (33%), Gaps = 67/342 (19%)
Query: 35 PRPE-PMLRVTQQEKTPPPRPSPLEAGSDGCEEPKQQVSWEQEFLVGSSPGGSGRALCMV 93
PR E P L +E PRP EEP E+ L SP LC V
Sbjct: 736 PRSEGPHLSPRPEEPHLSPRP----------EEPHLSPQAEEPHL---SPQPEEPCLCAV 782
Query: 94 CGAEIRAPSADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQDVRAEQPSPPNSD 153
+P A+ L P L LSP + L E L P P S
Sbjct: 783 PEEPHLSPQAEGPH---LSPQPEELHLSPQTEEPHLSPVPEEPCL-------SPQPEESH 832
Query: 154 -SGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRP-----RGLRPLELPAVPAT 207
S Q P P+ + + E+ E P P+ +P + P ELP P
Sbjct: 833 LSPQSEEPCLSPRPEESHLSPEL------EKPPLSPRPEKPPEEPGQCPAPEELPLFPPP 886
Query: 208 -EPGNKKPRGQRWKEPPGEEPVR--------KKRGRPMTKN--LDPDPEPPSPDSPTETF 256
EP G+ PGE P+ G P + PDP PP P SP T
Sbjct: 887 GEPSLSPLLGEPALSEPGEPPLSPLPEELPLSPSGEPSLSPQLMPPDPLPP-PLSPIITA 945
Query: 257 AAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGL---PRAE--SPSP 311
AAP + + +P G +G +SP + E + P A P P
Sbjct: 946 AAPPALSPLGELEYPFG----------AKGDSDPESPLAAPILETPISPPPEANCTDPEP 995
Query: 312 APP---PGLRGTLDLQVIRVRMEE-PPAVSLLQDWSRHPQGT 349
PP P G+ + ME PP S L S PQ +
Sbjct: 996 VPPMILPPSPGSPVGPASPILMEPLPPQCSPLLQHSLVPQNS 1037
Score = 34.3 bits (77), Expect = 0.19
Identities = 59/232 (25%), Positives = 83/232 (35%), Gaps = 42/232 (18%)
Query: 120 LSPSEKSNILEAWSEGVALLQDVRAEQPSPPNSDSG-----QDAHPDPDANPDAARMPAE 174
LSP + + L E A + SPP DS +D+ P +P E
Sbjct: 662 LSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLE 721
Query: 175 IVVLLDSEDNPSLPKRSRPRGLRPLELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGR 234
LL + P L RS L P P P P ++P P EEP
Sbjct: 722 ESPLLPLPEEPQLCPRSEGPHLSP--RPEEPHLSPRPEEPH----LSPQAEEP------- 768
Query: 235 PMTKNLDPDPEPPSPDS-PTETFAAP-AEVRHFTDGSFPAGFVLQLFSHTQ-------LR 285
+L P PE P + P E +P AE H + P L L T+
Sbjct: 769 ----HLSPQPEEPCLCAVPEEPHLSPQAEGPHLS----PQPEELHLSPQTEEPHLSPVPE 820
Query: 286 GPDSKDSPKDREVAEGGLPRAESPSPAPPP---GLRGTLDLQVIRVRMEEPP 334
P P++ ++ P++E P +P P L L+ + R E+PP
Sbjct: 821 EPCLSPQPEESHLS----PQSEEPCLSPRPEESHLSPELEKPPLSPRPEKPP 868
Score = 33.9 bits (76), Expect = 0.25
Identities = 62/277 (22%), Positives = 96/277 (34%), Gaps = 78/277 (28%)
Query: 24 DEEEAMVVAVIPRPEPMLRVTQQEKT--PPPRPSPLEAGSDGCEEPKQQVSWEQEFLVGS 81
D+ +M ++ +PML Q T PP+P P+ + S
Sbjct: 4143 DQPGSMTQNLLGPQQPMLERPMQNNTGPQPPKPGPV---------------------LQS 4181
Query: 82 SPGGSGRALCMVCGAEIRAPSADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQD 141
G G + G ++RA +L ++P LSP ++ + + LQ
Sbjct: 4182 GQGLPGVGIMPTVG-QLRAQLQG-----VLAKNPQLRHLSPQQQQQLQALLMQ--RQLQQ 4233
Query: 142 VRAEQPSPPNSDSGQDAHP---------------DPDANP-----------DAARMPAEI 175
+A + +PP + G P P P R+PA
Sbjct: 4234 SQAVRQTPPYQEPGTQTSPLQGLLGCQPQLGGFPGPQTGPLQELGAGPRPQGPPRLPAPP 4293
Query: 176 VVLLDSED----NPSLPKRSRPRGLRPLELPA----------VPATEPGNKKPRGQRWKE 221
L +P+ P S RP +LP+ +P T PG KP+G +
Sbjct: 4294 GALSTGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTPKPQGPTLEP 4353
Query: 222 PPGE-EPVRKKRGRPM-TKNLDP-DPEPPSPDSPTET 255
PPG P + + +K L P DP PD+ ET
Sbjct: 4354 PPGRVSPAAAQLADTLFSKGLGPWDP----PDNLAET 4386
Score = 33.5 bits (75), Expect = 0.33
Identities = 60/264 (22%), Positives = 84/264 (31%), Gaps = 20/264 (7%)
Query: 80 GSSPGGSGRALCMVCGAEIRAPSADTARSHILEQHPHTLDLSPSEKSNI-----LEA-WS 133
G +P AL + C + + + + E P + P K+ + LEA +
Sbjct: 378 GDTPTDEPDALYVACQGQPKGGHVTSMQPK--EPGPLQCEAKPLGKAGVQLEPQLEAPLN 435
Query: 134 EGVALLQDVRAEQPSPPNSDSGQDAHPDPDAN---PDAARMPAEIVVLLDSEDNPSLPKR 190
E + LL SPP +S P P+A+ P +PA L + S P
Sbjct: 436 EEMPLLPPPEESPLSPPPEES--PTSPPPEASRLSPPPEELPASP---LPEALHLSRPLE 490
Query: 191 SRPRGLRPLELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPD 250
P P E P P E P + PP E P P++ P+ P SP
Sbjct: 491 ESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSP--PPEASPLSPP 548
Query: 251 SPTETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAESPS 310
+ P E P L P ++SP L S
Sbjct: 549 FEESPLSPPPE--ELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEES 606
Query: 311 PAPPPGLRGTLDLQVIRVRMEEPP 334
P PP L R+ PP
Sbjct: 607 PLSPPPEESPLSPPPEASRLSPPP 630
Score = 33.1 bits (74), Expect = 0.43
Identities = 64/272 (23%), Positives = 97/272 (35%), Gaps = 50/272 (18%)
Query: 66 EPKQQVSWEQEFLVGSSPGGSGRALCMVCGAEIRAPSADTARSHILEQHPHTLDLSPSEK 125
E ++ + ++E L SSP L V +PS+ T + + P + +
Sbjct: 2280 ESRKALEVKKEELGASSPSYGPPNLGFV-----DSPSSGTHLGGLELKTPDVFKAPLTPR 2334
Query: 126 SNILEAWSEGVALLQDVRAEQPSPPNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNP 185
++ +E S G+ L R ++P P Q P P ++PD R + D P
Sbjct: 2335 ASQVEPQSPGLGL----RPQEPPP-----AQALAPSPPSHPDIFRPGS----YTDPYAQP 2381
Query: 186 SLPKRSRPR------GLRPLELPA-----VPATEPGNKKPRGQRWKEPPGEEPVRKKRGR 234
L R +P L P LP+ VPA+ + P E
Sbjct: 2382 PLTPRPQPPPPESCCALPPRSLPSDPFSRVPASPQSQSSSQSPLTPRPLSAEAFCPSPVT 2441
Query: 235 PMTKNLDPDPEPPSPDSPTETFA--------APAEVRHFTDGSFPAGFVLQLFSHTQLRG 286
P ++ DP PPS + FA P EV +F AG + +HT L
Sbjct: 2442 PRFQSPDPYSRPPSRPQSRDPFAPLHKPPRPQPPEV------AFKAGSL----AHTSL-- 2489
Query: 287 PDSKDSPKDREVAEGGLPRAESPSPAPPPGLR 318
+ P G A+ PS PP +R
Sbjct: 2490 -GAGGFPAALPAGPAGELHAKVPSGQPPNFVR 2520
Score = 32.0 bits (71), Expect = 0.95
Identities = 32/105 (30%), Positives = 42/105 (40%), Gaps = 16/105 (15%)
Query: 122 PSEKSNILEAWSEGVALLQDVRAEQPSPPNSDSGQDAHPDPDANPDAARMPAEIVVLLDS 181
P++ S + V L E+PSPP P P A P A P E +V L +
Sbjct: 4889 PTQHSYTYNVSNLDVRQLSAPPPEEPSPP---------PSPLA-PSPASPPTEPLVELPT 4938
Query: 182 EDN-----PS-LPKRSRPRGLRPLELPAVPATEPGNKKPRGQRWK 220
E PS LP S P RP P ++ PR ++WK
Sbjct: 4939 EPLAEPPVPSPLPLASSPESARPKPRARPPEEGEDSRPPRLKKWK 4983
Score = 31.2 bits (69), Expect = 1.6
Identities = 52/193 (26%), Positives = 64/193 (33%), Gaps = 45/193 (23%)
Query: 160 PDPDANPDAARMPAEIVVLLDSEDNP----------SLPKRSRPRGLRPLELPAVPATEP 209
PDP + P + + L P SL S G P LPA PA E
Sbjct: 2447 PDPYSRPPSRPQSRDPFAPLHKPPRPQPPEVAFKAGSLAHTSLGAGGFPAALPAGPAGEL 2506
Query: 210 GNKKPRGQ--RWKEPPG-------EEPVR----KKRGRPMTKNLDPDPEPPSPD------ 250
K P GQ + PG P+R + G P K P P P P
Sbjct: 2507 HAKVPSGQPPNFVRSPGTGAFVGTPSPMRFTFPQAVGEPSLKPPVPQPGLPPPHGINSHF 2566
Query: 251 SPTETFAAPAEVRH-FTDGSF-PAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAES 308
P T P + G+F P+G L GP S + + GL
Sbjct: 2567 GPGPTLGKPQSTNYTVATGNFHPSGSPL---------GPSSGSTGESY-----GLSPLRP 2612
Query: 309 PSPAPPPGLRGTL 321
PS PPP G+L
Sbjct: 2613 PSVLPPPAPDGSL 2625
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 44.3 bits (103), Expect = 2e-04
Identities = 57/243 (23%), Positives = 84/243 (34%), Gaps = 33/243 (13%)
Query: 35 PRPEPMLRVTQQEKTPPPRPSPLEAGSDGCEEPKQQVSWEQEFLVGSSPGGSGRALCMVC 94
P P + R ++ PP+P G G + SS G S +
Sbjct: 624 PSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQ---------------SSSGTSQHPPSLSP 668
Query: 95 GAEIRAPSADTARSHILEQHPHTLDLSPSEKSNIL--EAWSEGVALLQDVRAEQPSPPNS 152
R+PS T QH PS S + +S ++ +Q P PP
Sbjct: 669 KPPTRSPSPPT-------QHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQ 721
Query: 153 DSG-QDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPK--RSRPRGLRPLELPAVPATEP 209
+ P+ P+ +P+E + S P P + P G + LPA
Sbjct: 722 ATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLAG 781
Query: 210 GNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSPTE---TFAAPAEVRHFT 266
GN + P PV K R RP ++ P P+PP S + T AP + T
Sbjct: 782 GNPETAQPHAGTLPRPRPVPKPRNRP---SVPPPPQPPGVHSAGDSSLTNTAPTASKIVT 838
Query: 267 DGS 269
D +
Sbjct: 839 DSN 841
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 44.3 bits (103), Expect = 2e-04
Identities = 57/243 (23%), Positives = 84/243 (34%), Gaps = 33/243 (13%)
Query: 35 PRPEPMLRVTQQEKTPPPRPSPLEAGSDGCEEPKQQVSWEQEFLVGSSPGGSGRALCMVC 94
P P + R ++ PP+P G G + SS G S +
Sbjct: 546 PSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQ---------------SSSGTSQHPPSLSP 590
Query: 95 GAEIRAPSADTARSHILEQHPHTLDLSPSEKSNIL--EAWSEGVALLQDVRAEQPSPPNS 152
R+PS T QH PS S + +S ++ +Q P PP
Sbjct: 591 KPPTRSPSPPT-------QHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQ 643
Query: 153 DSG-QDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPK--RSRPRGLRPLELPAVPATEP 209
+ P+ P+ +P+E + S P P + P G + LPA
Sbjct: 644 ATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLAG 703
Query: 210 GNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSPTE---TFAAPAEVRHFT 266
GN + P PV K R RP ++ P P+PP S + T AP + T
Sbjct: 704 GNPETAQPHAGTLPRPRPVPKPRNRP---SVPPPPQPPGVHSAGDSSLTNTAPTASKIVT 760
Query: 267 DGS 269
D +
Sbjct: 761 DSN 763
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 43.9 bits (102), Expect = 2e-04
Identities = 67/268 (25%), Positives = 111/268 (41%), Gaps = 36/268 (13%)
Query: 96 AEIRAPSADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVALL-------QDVRAEQPS 148
AE+++PSA + +E+ P L PS + E S + LL ++ AE
Sbjct: 557 AEVQSPSA---KGVSIEEAPLELQ-PPSGEETTAEEASAAIQLLAATEASAEEAPAEVQP 612
Query: 149 PPNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLELPAVPATE 208
PP ++ + P P A PAE+ +E+ P+ + P P E+ PA E
Sbjct: 613 PPAEEAPAEVQPPP-----AEEAPAEVQPP-PAEEAPA-EVQPPPAEEAPAEVQPPPAEE 665
Query: 209 -PGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSPTETFAA-----PAEV 262
P +P +E P E P+ + L PP+ D P E + PA++
Sbjct: 666 APAEVQPPPA--EEAPAEVQSLPAEETPIEETLAAVHSPPADDVPAEEASVDKHSPPADL 723
Query: 263 RHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAESPSPAPPPGLR-GTL 321
FP G + ++ P S+ +P+D + E +SP A P ++ G++
Sbjct: 724 --LLTEEFPIGE-----ASAEVSPPPSEQTPEDEALVENVSTEFQSPQVAGIPAVKLGSV 776
Query: 322 DLQVIRVRMEEPPAV-SLLQDWSRHPQG 348
L+ + EE + S+L+D S G
Sbjct: 777 VLEG-EAKFEEVSKINSVLKDLSNTNDG 803
Score = 31.2 bits (69), Expect = 1.6
Identities = 60/294 (20%), Positives = 99/294 (33%), Gaps = 49/294 (16%)
Query: 44 TQQEKTPPPRPSPLEAGSDGCEEPKQQVSWEQEFLVGSSPGGSGRALCMVCGAEIRAPSA 103
T E+ P SPL E ++ S E + L + P AE R+P +
Sbjct: 448 TPAEEAPTEFQSPLPK-----ETTAEEASAEIQLLAATEPPADETP------AEARSPLS 496
Query: 104 DTA---RSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQDVRAEQPSPPNSDSGQDAHP 160
+ +H Q P + + E S ++ + A + AE SP + ++ + P
Sbjct: 497 EETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEAPADETPAEAQSPLSEETSAEEAP 556
Query: 161 DPDANPDAARMPAEIVVL--------------------------LDSEDNPSLPKRSRPR 194
+P A + E L +E+ P+ + P
Sbjct: 557 AEVQSPSAKGVSIEEAPLELQPPSGEETTAEEASAAIQLLAATEASAEEAPA-EVQPPPA 615
Query: 195 GLRPLELPAVPATE-PGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSPT 253
P E+ PA E P +P PP EE + + P + PP+ ++P
Sbjct: 616 EEAPAEVQPPPAEEAPAEVQP-------PPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPA 668
Query: 254 ETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAE 307
E PAE S PA + + P + D P + + P A+
Sbjct: 669 EVQPPPAEEAPAEVQSLPAEETPIEETLAAVHSPPADDVPAEEASVDKHSPPAD 722
Score = 28.9 bits (63), Expect = 8.0
Identities = 36/143 (25%), Positives = 54/143 (37%), Gaps = 22/143 (15%)
Query: 221 EPPGEEPVRKKRGRPMTKNLDPDPEP-----------PSPDSPTETFAAPAEVRHFTDGS 269
EPP E K P+ + EP PS + + AA A +
Sbjct: 258 EPPSTEKFPAKIQPPLVEEATAKAEPRPAEETHVQVQPSTEETPDAEAATAVAENSVKVQ 317
Query: 270 FPAGFVLQLFSH-TQLRGPDSKDSPKDREVAEGGLPRA-ESPSPAPPPGLRGTLDLQVIR 327
P L +++ P +++SP +AE P A ESPS PP +++
Sbjct: 318 PPPAEEAPLVEFPAEIQPPSAEESPSVELLAEILPPSAEESPSEEPP--------AEILP 369
Query: 328 VRMEEPPAVSLLQDWSRHPQGTK 350
E+ P+V LL + R P K
Sbjct: 370 PPAEKSPSVELLGE-IRSPSAQK 391
>gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo
sapiens]
Length = 735
Score = 43.9 bits (102), Expect = 2e-04
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 146 QPSPPNSD----SGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLEL 201
+PSPP + G A + ++P+A+R PA L E + +R G +P E
Sbjct: 37 EPSPPEPEPQAPEGSQAGAEGPSSPEASRSPARGAYLQSLEPSS---RRWVLGGAKPAED 93
Query: 202 PAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSPTETFAAPAE 261
++ PG +P G+ W P EE DP PP+P+ P +
Sbjct: 94 TSLGPGVPGTGEPAGEIWYNPIPEE----------------DPRPPAPEPPGPQPGSAES 137
Query: 262 VRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAE 300
G+ PA + S T+ GP + S K +++ E
Sbjct: 138 EGLAPQGAAPASPPTKA-SRTKSPGPARRLSIKMKKLPE 175
>gi|118498339 EMI domain containing 2 [Homo sapiens]
Length = 439
Score = 43.5 bits (101), Expect = 3e-04
Identities = 55/198 (27%), Positives = 76/198 (38%), Gaps = 18/198 (9%)
Query: 123 SEKSNILEAWSEGVALLQDVRAEQPSPPNSDSGQDAHPDPDANPDAARMPAEIVVLLDSE 182
SE+ LEA V LL+ AE+PS P++D P N D +P I + +
Sbjct: 138 SERLTTLEA---KVLLLE--AAERPSSPDNDLPAPESTPPTWNEDF--LPDAIPL---AH 187
Query: 183 DNPSLPKRSRPRGLRPLELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDP 242
P + + P G P PA PG+K RGQ ++ P P G P + L
Sbjct: 188 PVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPP--GLLGPPGPRGLPG 245
Query: 243 DPEPPSPDSPTETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGG 302
+ P P P P + P G + L T DS+ + + G
Sbjct: 246 EMGRPGPPGPPGPAGNPG-----PSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLAG 300
Query: 303 LPRAES-PSPAPPPGLRG 319
+P P P PPG RG
Sbjct: 301 VPGPRGPPGPPGPPGPRG 318
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 42.7 bits (99), Expect = 5e-04
Identities = 71/243 (29%), Positives = 90/243 (37%), Gaps = 46/243 (18%)
Query: 112 EQHPHTLDLSPSEKSNILEAWSEGV--ALLQDVRAEQPSPPNSDSGQDAHPDPDANPDAA 169
EQ H+ P + WS L V P+ P S P P A
Sbjct: 71 EQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRP 130
Query: 170 RMPAEIVVLLDSEDNPSLPKRSRPRGL-RPLELPAVPATEPGNKKPRGQRWKEPPGEEPV 228
P + + +LP S P G RP LP P P PR RW +P P
Sbjct: 131 SEP--------TPGSEALPPGSLPEGEPRPYALP--PRESPA---PRPFRWGDPFSPAPP 177
Query: 229 RKKRGRPMTKNLDPDPEPPSPDSPTETFAAPAEVRHFTDGSFP--AGFVLQLFSHTQLRG 286
R + P ++ P +PPS + F +P VR G P A V LF R
Sbjct: 178 RPQ---PPSR---PAAQPPSRPA----FRSPRPVR----GPHPRRAVVVAVLFGVQAPR- 222
Query: 287 PDSKDSPKDREVAEGGLPR-AESPSPAPPPGLRGTLDLQVIRVRMEEPPAVSLLQDWSRH 345
R+VAEGGL R P AP G RG L L V+ + P + + SR
Sbjct: 223 ---------RDVAEGGLRRDGRRPGLAPQRG-RGGLLLVVLHAATVQRPRLG--RGPSRP 270
Query: 346 PQG 348
P+G
Sbjct: 271 PRG 273
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 42.4 bits (98), Expect = 7e-04
Identities = 54/204 (26%), Positives = 65/204 (31%), Gaps = 34/204 (16%)
Query: 144 AEQPSPPNSDSGQDAH---------------PDPDANPDAARMPAEIVVLLDSEDNPSLP 188
A P+PP + G A P P A AR P + +P P
Sbjct: 106 ATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPG-P 164
Query: 189 KRSRPRGLRPLEL---PAVPATEPGNKKPRGQRWKEPP---GEEPVRKKRGRPMTKNLDP 242
+ PR R L P PA P P G R PP EP +P
Sbjct: 165 AQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQ 224
Query: 243 DPEPPSPDSPTETFAAPA----------EVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDS 292
P PP P P E A A EV + GS AG L L ++
Sbjct: 225 QPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAAR 284
Query: 293 PKDREVAEG--GLPRAESPSPAPP 314
+ G LPR + P APP
Sbjct: 285 GRLERTRLGALALPRGDRPGRAPP 308
>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
homolog 2 [Homo sapiens]
Length = 1210
Score = 42.0 bits (97), Expect = 0.001
Identities = 38/168 (22%), Positives = 60/168 (35%), Gaps = 14/168 (8%)
Query: 97 EIRAPSADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQDVRAEQPSPPNSDSGQ 156
+++ ++ + S + P + PS ++ E VA AE S +SDS
Sbjct: 426 DLQLSDSEDSDSEQTPEKPPSSSAPPSAPQSL----PEPVASAHSSSAESESTSDSDSSS 481
Query: 157 DAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLELPAVPATEPGNKKPRG 216
D+ + ++ P E + P+ K L + PA P P G
Sbjct: 482 DSESESSSSDSEENEPLETPA--PEPEPPTTNKWQLDNWLTKVSQPAAP--------PEG 531
Query: 217 QRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSPTETFAAPAEVRH 264
R EPP P K T + + P P S ++ AP E H
Sbjct: 532 PRSTEPPRRHPESKGSSDSATSQEHSESKDPPPKSSSKAPRAPPEAPH 579
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 42.0 bits (97), Expect = 0.001
Identities = 74/316 (23%), Positives = 105/316 (33%), Gaps = 52/316 (16%)
Query: 35 PRPEPMLRVTQQE---------KTPPPRPSPLEAGSDGCEEPKQQVSWEQEFLVGSSPGG 85
P+P P+ + Q+ +TP P P P + S EP + V + + P
Sbjct: 146 PKPTPLTPLEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSP 205
Query: 86 SGRALCMVCGAEIRA-------------------PSADTARSHILEQHPHTLDLSPSEKS 126
+ V ++A PSA + S +L P SP+
Sbjct: 206 EPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAASP 265
Query: 127 NILEAWSEGVALLQDVRAEQPSPPNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNP- 185
S A +PSP S+S + P P +P+ R PA V + P
Sbjct: 266 E-----SRKSARTTSPEPRKPSP--SESPEPWKPFPAVSPE-PRRPAPAVSPGSWKPGPP 317
Query: 186 --SLPKRSRPRGLRPLELPAVPA--TEPGNKKP----RGQRWKEPPGEEPVRKKRGRPMT 237
P +S P PA PA PG KP WK P K +
Sbjct: 318 GSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWK-----S 372
Query: 238 KNLDPDPEPPSPDSPTETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDRE 297
++ P P SP + P E+R P + +LR P SP+ R
Sbjct: 373 SSVSPSSWKSPPASPESWKSGPPELRKTAPTLSPEHWKAVPPVSPELRKPGPPLSPEIRS 432
Query: 298 VAEGGLPRAESPSPAP 313
A G P PS +P
Sbjct: 433 PA--GSPELRKPSGSP 446
Score = 33.5 bits (75), Expect = 0.33
Identities = 74/328 (22%), Positives = 105/328 (32%), Gaps = 73/328 (22%)
Query: 27 EAMVVAVIPRPEPMLRVTQQEKTPPPRPSPLEAGSDGCEEPKQQVSWEQEFLVGSSPGGS 86
E+ +A +P PEP +K P P ++A PK Q +G S
Sbjct: 195 ESQKLAPVPSPEP-------QKPAPVSPESVKAT---LSNPKPQKQSHFPETLGPPSASS 244
Query: 87 GRALCMVCGAEIRAPS---ADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQDVR 143
+ + E PS + +R P SPSE E W A+ + R
Sbjct: 245 PESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESP---EPWKPFPAVSPEPR 301
Query: 144 AEQP-------------------SPPNSDSG--QDAHPDPDANP---------------- 166
P S P++ SG + A P P +P
Sbjct: 302 RPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKP 361
Query: 167 ----DAARMPAEIVVLLDSEDNPSLPK--RSRPRGLR-------PLELPAVPATEPGNKK 213
+A + V + P+ P+ +S P LR P AVP P +K
Sbjct: 362 TPSVSSASWKSSSVSPSSWKSPPASPESWKSGPPELRKTAPTLSPEHWKAVPPVSPELRK 421
Query: 214 PR---GQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSP---DSPTETFAAPAEVRHFTD 267
P + P G +RK G P L PD SP D P ++
Sbjct: 422 PGPPLSPEIRSPAGSPELRKPSGSPDLWKLSPDQRKTSPASLDFPESQKSSRGGSPDLWK 481
Query: 268 GSFPAGFVLQLFSHTQLRGPDS-KDSPK 294
SF +F T+ GP +SPK
Sbjct: 482 SSFFIEPQKPVFPETRKPGPSGPSESPK 509
Score = 32.3 bits (72), Expect = 0.73
Identities = 44/181 (24%), Positives = 58/181 (32%), Gaps = 30/181 (16%)
Query: 147 PSPPNSDSGQDAH-----PDPDANPDAARMPAEIVVLLDSEDNPSLPKRSR-PRGLRPLE 200
P PP S ++ P P+ A P + L NP K+S P L P
Sbjct: 185 PEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLS---NPKPQKQSHFPETLGP-- 239
Query: 201 LPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSPTETF---- 256
P+ + E P EP G P R + P+P PSP E +
Sbjct: 240 -PSASSPE----SPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFP 294
Query: 257 AAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSP-KDREVAEGGLPRAESPSPAPPP 315
A E R P + GP P K A G + P+P+ P
Sbjct: 295 AVSPEPRRPAPAVSPGSW---------KPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSP 345
Query: 316 G 316
G
Sbjct: 346 G 346
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 42.0 bits (97), Expect = 0.001
Identities = 93/408 (22%), Positives = 141/408 (34%), Gaps = 68/408 (16%)
Query: 26 EEAMVVAVIPRPE---------PMLRVTQQEKTPPPRPSPLEAGSDGCEEPKQQ---VSW 73
E A V+ V P P+ P+ Q + PP P+P A P+ S
Sbjct: 614 EAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQQPPQAPTPQAAAPPQATTPQPSPGLASS 673
Query: 74 EQEFLVGSSPGGSGRALCMVCGAEIRAPSADTARSHILEQHPH-----TLDLS---PSEK 125
++ ++G P + A+ ++ P + ++ + + PH ++ +S P++
Sbjct: 674 PEKIVLGQPPSATPTAILTQDSLQMFLPQ-ERSQQPLSAEGPHLSVPASVIVSAPPPAQD 732
Query: 126 SNILEAWSEGVALLQDVRAEQPSPPNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNP 185
++G L Q SP + A P P ++ L DS P
Sbjct: 733 PAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLGDSPHLP 792
Query: 186 SL-----PKR--SRPRG---------LRPLELPAVPATEPGNKKPRGQRWKEPPGEEPVR 229
S P R SRP+ L P P P T PG + Q PP P
Sbjct: 793 SPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAP 852
Query: 230 KKRGRPMTKNLDPDPEPPS----------PDSPTETFAAPAEVRHFTDGSFPAGFVLQLF 279
G P L P +PP P S + A+ +E P+ F LQ F
Sbjct: 853 TAPGPPQPP-LRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQ-F 910
Query: 280 SHTQLRGPDSKDSPKDREVAEGGLPRAESPSPAPPPGLRGTLDLQVIRVRMEEPPAVSLL 339
+Q GP +P L P+ PPP R + + +P A LL
Sbjct: 911 PPSQ--GPHKSPTPPPT------LHLVPEPAAPPPPPPRTFQMVTTPFPALPQPKA--LL 960
Query: 340 QDWSRHPQG----TKRVGA-----GDTSDWPTVLSESSTTVAGKPEKG 378
+ + + P G K GA TS P +S V+G+ G
Sbjct: 961 ERFHQVPSGIILQNKAGGAPAAPQTSTSLGPLTSPAASVLVSGQAPSG 1008
Score = 30.0 bits (66), Expect = 3.6
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 19/112 (16%)
Query: 222 PPGEEPVRKKRGRPMTKNLDPDPEPPSPDSP------TETFAAPAEVRHFTDG--SFPAG 273
PP + P K P T +L P+P P P P T F A + + + P+G
Sbjct: 911 PPSQGP-HKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFPALPQPKALLERFHQVPSG 969
Query: 274 FVLQLFSHTQLRGPDSKDS------PKDREVAEG----GLPRAESPSPAPPP 315
+LQ + P + S P + G G P A S +PAP P
Sbjct: 970 IILQNKAGGAPAAPQTSTSLGPLTSPAASVLVSGQAPSGTPTAPSHAPAPAP 1021
Score = 28.9 bits (63), Expect = 8.0
Identities = 45/190 (23%), Positives = 70/190 (36%), Gaps = 14/190 (7%)
Query: 179 LDSEDNPSLPKRSRPRGLRPLELPAVPATEPGNKKPRG-QRWKEPPGEEPVRKKRGRPMT 237
LD++++ +P R+RP ++ E + + K+ G + +PV + P T
Sbjct: 1281 LDADEDGPMPSRNRPP-IKTYEARSRIGLKLKIKQEAGLSKVVHNTALDPVHQPPPPPAT 1339
Query: 238 -KNLDPDPEPPSPDSPTETF------AAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDSK 290
K +P P PP P PT PA G+ P L L + ++
Sbjct: 1340 LKVAEPPPRPPPPPPPTGQMNGTVDHPPPAAPERKPLGTAPHCPRLPLRKTYR----ENV 1395
Query: 291 DSPKDREVAEGGLPRAESPSPAPPPGLRGTLDLQVIRVRMEEPPAVSLLQDWSRHPQGTK 350
P E G R SP+P P T L +E+ +L+ P +
Sbjct: 1396 GGPGAPEGTPAGRARGGSPAPLPAKVDEATSGLIRELAAVEDELYQRMLKGPPPEPAASA 1455
Query: 351 RVGAGDTSDW 360
G GD DW
Sbjct: 1456 AQGTGD-PDW 1464
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 42.0 bits (97), Expect = 0.001
Identities = 48/194 (24%), Positives = 73/194 (37%), Gaps = 43/194 (22%)
Query: 146 QPSPPNSDSGQDAHPDPDANPDA-----ARMPAEIV--VLLDSEDNPSLPKRSR-----P 193
+P+ P D+ + P P P A A +PA + V SE P LP +S P
Sbjct: 278 EPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPP 337
Query: 194 RGLRPLELPAVPATEPGNKKPRGQRWKEPPGEEPV--RKKRGRPMTKN--LDPDPEPPSP 249
+ LPA PA PPG +P +K+ GRP L+P P PP+
Sbjct: 338 QKAGAQALPAPPA---------------PPGSQPFLQKKRHGRPGAGGGKLNPPPAPPAR 382
Query: 250 DSPTETFAAPAEVRHFTDGSFPAG------------FVLQLFSHTQLRGPDSKDSPKDRE 297
TE + + +T P G F + H+ P + ++
Sbjct: 383 SPTTELSSKSQQATAWTPTQQPGGQLRNGSLHIIDDFESKFTFHSVEDFPPPDEYKPCQK 442
Query: 298 VAEGGLPRAESPSP 311
+ +PR+ +P P
Sbjct: 443 IYPSKIPRSRTPGP 456
>gi|12669915 E2F transcription factor 4 [Homo sapiens]
Length = 413
Score = 41.6 bits (96), Expect = 0.001
Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 30 VVAVIPRPEPMLRVTQQEKTPPPRPSPLEAGSDGCEEPKQQVSWEQEFLVGSS--PGGSG 87
V +P PE +L+ TPPP P P A S P + GS+ G +G
Sbjct: 205 VAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSP-QLTPTAVPGSAEVQGMAG 263
Query: 88 RALCMVCGAEIRAPSADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQDVRAEQP 147
A + S D+ L P TLD P + S +L++ S +
Sbjct: 264 PAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSS-------SSSSS 316
Query: 148 SPPNSDSGQDAHPDPDAN 165
S NS+S + P+P +
Sbjct: 317 SSSNSNSSSSSGPNPSTS 334
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 41.6 bits (96), Expect = 0.001
Identities = 43/176 (24%), Positives = 60/176 (34%), Gaps = 29/176 (16%)
Query: 147 PSPPNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLELPAVPA 206
PSP + G+ P + + + P+ + PS P + + + A
Sbjct: 296 PSPASGRRGEGDAPFSEPGTTSTQRPSSPET---ATKQPSSPYEDKDKDKKEKS-----A 347
Query: 207 TEPGNKKPRGQRWKEPPGEEPVRKKR--GRPM---TKNLDPDP-EPPSPDSPTETFAAPA 260
T P R EPP P+ +R G P T L +P PPS SPT + P
Sbjct: 348 TRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPK 407
Query: 261 EVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAESPSPAPPPG 316
S S SP+ +V+ ESP PAP PG
Sbjct: 408 SPEKLPQSS---------------SSESSPPSPQPTKVSRHASSSPESPKPAPAPG 448
Score = 29.6 bits (65), Expect = 4.7
Identities = 54/230 (23%), Positives = 79/230 (34%), Gaps = 52/230 (22%)
Query: 141 DVRAEQPSPPNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLE 200
+V+ + + P + SG D+ P+P A A LP+RSR
Sbjct: 1603 EVKDKPRAAPRAQSGSDSSPEPKAPAPRA-----------------LPRRSR-------- 1637
Query: 201 LPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGR--------PMTKNLDPDPEPPSPDSP 252
+ +++ P G E E P + + R P TK+ P S SP
Sbjct: 1638 --SGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSP 1695
Query: 253 TETFAAPAEVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAESPSP- 311
T A R + S P + + + R S SP+ E + R + SP
Sbjct: 1696 ELTRKARLSRRSRSASSSPE---TRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPR 1752
Query: 312 ---------APPPGLRGTLDLQVIRVR-MEEPPAVSLLQDWSRHPQGTKR 351
+P P RG LQ R R E + +D S Q T R
Sbjct: 1753 TKTTSRRGRSPSPKPRG---LQRSRSRSRREKTRTTRRRDRSGSSQSTSR 1799
>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
Length = 1894
Score = 39.7 bits (91), Expect = 0.005
Identities = 54/225 (24%), Positives = 73/225 (32%), Gaps = 44/225 (19%)
Query: 119 DLSPSEKSNILEAWSEGVALLQDVRAEQPSPPNSDSGQDAHPDPDANPDAARMPAEIVVL 178
D P K + L + ++ V D E SP D H P A P AAR
Sbjct: 935 DTHPQGKYSSLASKAQDVQQSTDADTEGHSPKAQPGSTDRHASP-ARPPAAR-------- 985
Query: 179 LDSEDNPSLPKRSRPRGLRPLELPAVPA-------------------------TEPGNKK 213
S+ +PS+P+R P G P + P P T+ G +
Sbjct: 986 --SQQHPSVPRRMTP-GRAPQQQPPPPVATSQHHPGPQSRDAGRSPSQPRLSLTQAGRPR 1042
Query: 214 PRGQRWKEPPGEEPVRKKRGRPMT--KNLDPDPEPPSPDSPTETFAAPAEVRHFTDGSFP 271
P Q + RG T +N D D + D TE A +VR +
Sbjct: 1043 PTSQGRSHSSSDPYTASSRGMLPTALQNQDEDAQGSYDDDSTEVEA--QDVRAPAHAARA 1100
Query: 272 AGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAESPSPAPPPG 316
L H Q+ P + D G A SP+ PG
Sbjct: 1101 KEAAASLPKHQQVESPTGAGAGGDHRSQRG---HAASPARPSRPG 1142
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 39.7 bits (91), Expect = 0.005
Identities = 46/177 (25%), Positives = 68/177 (38%), Gaps = 20/177 (11%)
Query: 97 EIRAPSADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQDVRAEQPSPPNSDSGQ 156
E+RAP + R + +Q +LD ++S + L +R S +
Sbjct: 456 ELRAPGSVAERRRLFQQKAASLDERTRQRSPASDLELRFAQELGRIRRSTSREELVRSHE 515
Query: 157 DAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSR---PRGLRPLELPAV--PATEPGN 211
P + R P E + PS PK SR P +P + P EPG
Sbjct: 516 SLRATLQRAP-SPREPGEPPLF----SRPSTPKTSRAVSPAAAQPPSPSSAEKPGDEPGR 570
Query: 212 KKPRGQRWKEPPGEEP---VRKKRGRPMTKN------LDPDPEPPSPDSPTETFAAP 259
+ RG + PGE P VR++ P+T++ P P PP+ D P AP
Sbjct: 571 PRSRGPAGRTEPGEGPQQEVRRRDQFPLTRSRAIQECRSPVP-PPAADPPEARTKAP 626
Score = 37.4 bits (85), Expect = 0.023
Identities = 65/291 (22%), Positives = 92/291 (31%), Gaps = 64/291 (21%)
Query: 46 QEKTPPPRPSPLEAGSDGCEEPKQQVSWEQEFLVGSSP-----GGSGRALCMVCGAEIRA 100
Q ++P P + L G G E Q++ ++ L+ P G L G R
Sbjct: 2042 QRRSPSPGATRLARGGLGEGEYAQRLQALRQRLLRGGPEDGKVSGLRGPLLESLGGRARD 2101
Query: 101 PS-ADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQDVRAEQPSP---------- 149
P A A S H L+ +KS+ ++S+G A + +P
Sbjct: 2102 PRMARAASSEAAPHHQPPLENRGLQKSS---SFSQGEAEPRGRHRRAGAPLEIPVARLGA 2158
Query: 150 ------PNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLELPA 203
P+ + +A P A P A + PS PK + P P + P
Sbjct: 2159 RRLQESPSLSALSEAQPSSPARPSAPK--------------PSTPKSAEPSATTPSDAPQ 2204
Query: 204 VPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSPTETFAAPAEVR 263
PA +P K P EPVR + P P +T A P
Sbjct: 2205 PPAPQPAQDK------APEPRPEPVRASK-------------PAPPPQALQTLALPLTPY 2245
Query: 264 HFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAESPSPAPP 314
S LQL H Q P + + R SP P P
Sbjct: 2246 AQIIQS------LQLSGHAQGPSQGPAAPPSEPKPHAAVFARVASPPPGAP 2290
Score = 30.4 bits (67), Expect = 2.8
Identities = 33/122 (27%), Positives = 47/122 (38%), Gaps = 24/122 (19%)
Query: 147 PSPPNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGL---RPLELPA 203
P+PP+ + P P P++ + L + P R RGL RP E P
Sbjct: 2812 PTPPSVTVSPSSPPTP---------PSQALSSLKAVGPPPQTPPRRHRGLQAARPAE-PT 2861
Query: 204 VPATE--PGNKKP------RGQRWKEPPGEEPVRKKRGRPMTKNL---DPDPEPPSPDSP 252
+P+T P KP P G +PV + + P PEPP+P+ P
Sbjct: 2862 LPSTHVTPSEPKPFVLDTGTPIPASTPQGVKPVSSSTPVYVVTSFVSAPPAPEPPAPEPP 2921
Query: 253 TE 254
E
Sbjct: 2922 PE 2923
Score = 29.3 bits (64), Expect = 6.2
Identities = 39/138 (28%), Positives = 46/138 (33%), Gaps = 11/138 (7%)
Query: 188 PKRSRPRGLRPLELPAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPP 247
P SRP RP + P A P P P + K + P P+ P
Sbjct: 2786 PVTSRPARARPPDSPTSLAPPLAPAAPTPPSVTVSPSSPPTPPSQALSSLKAVGPPPQTP 2845
Query: 248 SPDSPTETFAAPAE----VRHFTDGSFPAGFVLQL-----FSHTQLRGPDSKDSPKDREV 298
A PAE H T S P FVL S Q P S +P
Sbjct: 2846 PRRHRGLQAARPAEPTLPSTHVTP-SEPKPFVLDTGTPIPASTPQGVKPVSSSTPVYVVT 2904
Query: 299 AEGGLPRA-ESPSPAPPP 315
+ P A E P+P PPP
Sbjct: 2905 SFVSAPPAPEPPAPEPPP 2922
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 39.3 bits (90), Expect = 0.006
Identities = 56/217 (25%), Positives = 71/217 (32%), Gaps = 26/217 (11%)
Query: 41 LRVTQQEKTPPPRPSPLEAGSDGCEEPKQQVSWEQEFLVGSSPGGSGRALCMVCGAEIRA 100
L V E PPP P+P + C+ PK + E S + G
Sbjct: 626 LEVMAIESPPPPEPTPAD-----CQSPKMTTFQDSEL--------SDELQAAMTGPAEVG 672
Query: 101 PSADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQDVRAEQPSPPNSDSGQ---D 157
P+ + SH L P S S LL D PS P S S + D
Sbjct: 673 PTTEKPSSH-LPPTPRATTRQDSSLGGRARHMSSSQELLGD-GPPGPSSPMSRSQEYLLD 730
Query: 158 AHPDPDANPDAAR--MPAEIVVLLDSEDNPSLPKRSRPRGLRPLELPAVPA-TEPGNKKP 214
P P P AR + P P++ P G P P T PG+ +
Sbjct: 731 EGPAPGTPPREARPGRHGHSIKRASVPPVPGKPRQVLPPGTSHFTPPQTPTKTRPGSPQA 790
Query: 215 RGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDS 251
G P G P K +P + L P P SP S
Sbjct: 791 LG----GPHGPAPATAK-VKPTPQLLPPTERPMSPRS 822
Score = 32.3 bits (72), Expect = 0.73
Identities = 42/176 (23%), Positives = 61/176 (34%), Gaps = 33/176 (18%)
Query: 144 AEQPSPPNSDSGQDAHPDPDANP---DAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLE 200
+EQ PP P P A P D A +P L + + P +P+
Sbjct: 1183 SEQAGPPELPP-----PPPPAEPPPTDLAHLPP-----LPPPEGEARKPAKPPVSPKPVL 1232
Query: 201 LPAVPATEPGNKKPRGQRWKEP-PGEEPVRKKRGRPMTKNLDPDPEPPSPDSPTETFAAP 259
VP + G+ P ++ P PG V++ G P + P+PP P + + A
Sbjct: 1233 TQPVPKLQ-GSPTPTSKKVPLPGPGSPEVKRAHGTPPPVS----PKPPPPPTAPKPVKAV 1287
Query: 260 AEVRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAESPSPAPPP 315
A + + G PA P P G P + SPA PP
Sbjct: 1288 AGLPSGSAGPSPA--------------PSPARQPPAALAKPPGTPPSLGASPAKPP 1329
>gi|5031855 lymphocyte cytosolic protein 2 [Homo sapiens]
Length = 533
Score = 39.3 bits (90), Expect = 0.006
Identities = 61/252 (24%), Positives = 90/252 (35%), Gaps = 50/252 (19%)
Query: 34 IPRPEPMLRVTQQEKTPPPRPS----PLEAGSDGCEEPKQQVSWEQEFLVGSSPGGSGRA 89
I RP P + QQ PP RP P AG + P Q + E+ P S
Sbjct: 174 IDRP-PSGKTPQQPPVPPQRPMAALPPPPAGRNHSPLPPPQTNHEE-------PSRSRNH 225
Query: 90 LCMVCGAEIRAPSADTARSHILEQ-------HPHTLDLSP--SEKSNILEAWSEGVALLQ 140
A++ APS D + L++ P TL P S+K +I S G L +
Sbjct: 226 KT----AKLPAPSIDRSTKPPLDRSLAPFDREPFTLGKKPPFSDKPSIPAGRSLGEHLPK 281
Query: 141 DVRAEQPSPPNSDSGQDAHPDPDANP-----------------DAARMPAEIVVLLDSED 183
+ P PP ++ + + P P P D + P LL
Sbjct: 282 IQKP--PLPPTTERHERSSPLPGKKPPVPKHGWGPDRRENDEDDVHQRPLPQPALLPMSS 339
Query: 184 NPSLPKRSRPRGLRPLELPAVPA--TEPGNKKPRGQR----WKEPPGEEPVRKKRGRPMT 237
N + ++P + PL +P +E + P+ + + P P + GR
Sbjct: 340 NTFPSRSTKPSPMNPLPSSHMPGAFSESNSSFPQSASLPPYFSQGPSNRPPIRAEGRNFP 399
Query: 238 KNLDPDPEPPSP 249
L P PPSP
Sbjct: 400 LPLPNKPRPPSP 411
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 39.3 bits (90), Expect = 0.006
Identities = 40/173 (23%), Positives = 53/173 (30%), Gaps = 20/173 (11%)
Query: 145 EQPSPPNSDSGQDAHPDP---DANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLEL 201
++P+P + S +P A P E E P+ PK P P
Sbjct: 284 KEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPT 343
Query: 202 PAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSPTETFAAPAE 261
KKP KEP P K P T +P P P +PT T +AP
Sbjct: 344 TPKEPAPTAPKKPAPTTPKEP---APTTPKEPAPTTTK-EPSPTTPKEPAPTTTKSAPTT 399
Query: 262 VRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAESPSPAPP 314
+ PA T P + P E + P+P P
Sbjct: 400 TKE------PA-------PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTP 439
Score = 29.6 bits (65), Expect = 4.7
Identities = 49/251 (19%), Positives = 76/251 (30%), Gaps = 39/251 (15%)
Query: 145 EQPSPPNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLELPAV 204
++P+P P A P + PA + P P + P+ P +
Sbjct: 432 KEPAPTTPKKPAPTTPKEPA-PTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKL 490
Query: 205 PATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEP-----PSPDSPTETFAAP 259
T P P P E + T +P P +P++P E
Sbjct: 491 TPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTT 550
Query: 260 AEVRHFTDGSFPAGFVLQLFSHTQLRG----------PDSKDSPKDREVA-----EGGLP 304
+ T PA + + T +G P + P +E+A E
Sbjct: 551 PKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTST 610
Query: 305 RAESPSPAPPPGLRGTLDLQVIRVRMEEPPAVSLLQDWSRHPQGTKRVGAGDTSDWPTVL 364
+ P+P P G T + +EP + P+GT PT L
Sbjct: 611 TCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTT--------PKGTA----------PTTL 652
Query: 365 SESSTTVAGKP 375
E + T KP
Sbjct: 653 KEPAPTTPKKP 663
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 39.3 bits (90), Expect = 0.006
Identities = 40/173 (23%), Positives = 53/173 (30%), Gaps = 20/173 (11%)
Query: 145 EQPSPPNSDSGQDAHPDP---DANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLEL 201
++P+P + S +P A P E E P+ PK P P
Sbjct: 325 KEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPT 384
Query: 202 PAVPATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSPTETFAAPAE 261
KKP KEP P K P T +P P P +PT T +AP
Sbjct: 385 TPKEPAPTAPKKPAPTTPKEP---APTTPKEPAPTTTK-EPSPTTPKEPAPTTTKSAPTT 440
Query: 262 VRHFTDGSFPAGFVLQLFSHTQLRGPDSKDSPKDREVAEGGLPRAESPSPAPP 314
+ PA T P + P E + P+P P
Sbjct: 441 TKE------PA-------PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTP 480
Score = 29.6 bits (65), Expect = 4.7
Identities = 49/251 (19%), Positives = 76/251 (30%), Gaps = 39/251 (15%)
Query: 145 EQPSPPNSDSGQDAHPDPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLELPAV 204
++P+P P A P + PA + P P + P+ P +
Sbjct: 473 KEPAPTTPKKPAPTTPKEPA-PTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKL 531
Query: 205 PATEPGNKKPRGQRWKEPPGEEPVRKKRGRPMTKNLDPDPEP-----PSPDSPTETFAAP 259
T P P P E + T +P P +P++P E
Sbjct: 532 TPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTT 591
Query: 260 AEVRHFTDGSFPAGFVLQLFSHTQLRG----------PDSKDSPKDREVA-----EGGLP 304
+ T PA + + T +G P + P +E+A E
Sbjct: 592 PKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTST 651
Query: 305 RAESPSPAPPPGLRGTLDLQVIRVRMEEPPAVSLLQDWSRHPQGTKRVGAGDTSDWPTVL 364
+ P+P P G T + +EP + P+GT PT L
Sbjct: 652 TCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTT--------PKGTA----------PTTL 693
Query: 365 SESSTTVAGKP 375
E + T KP
Sbjct: 694 KEPAPTTPKKP 704
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.131 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,782,205
Number of Sequences: 37866
Number of extensions: 1472395
Number of successful extensions: 8517
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 569
Number of HSP's that attempted gapping in prelim test: 7130
Number of HSP's gapped (non-prelim): 1899
length of query: 381
length of database: 18,247,518
effective HSP length: 104
effective length of query: 277
effective length of database: 14,309,454
effective search space: 3963718758
effective search space used: 3963718758
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.