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Search of human proteins with 38679905
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38679905 tripartite motif-containing 65 [Homo sapiens]
(517 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38679905 tripartite motif-containing 65 [Homo sapiens] 1082 0.0
gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens] 138 1e-32
gi|68160937 tripartite motif-containing 25 [Homo sapiens] 130 3e-30
gi|21630277 tripartite motif-containing 11 [Homo sapiens] 129 8e-30
gi|112421127 tripartite motif-containing 58 [Homo sapiens] 125 7e-29
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 115 1e-25
gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens] 115 1e-25
gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens] 115 1e-25
gi|157743261 tripartite motif-containing 75 [Homo sapiens] 113 4e-25
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 112 8e-25
gi|5730009 ret finger protein [Homo sapiens] 109 5e-24
gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo s... 108 2e-23
gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo sa... 106 4e-23
gi|15208665 tripartite motif protein TRIM14 isoform alpha [Homo ... 103 3e-22
gi|15208663 tripartite motif protein TRIM14 isoform alpha [Homo ... 103 3e-22
gi|15208667 tripartite motif protein TRIM14 isoform alpha [Homo ... 103 3e-22
gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens] 103 5e-22
gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens] 103 5e-22
gi|15208660 tripartite motif protein 21 [Homo sapiens] 101 2e-21
gi|217035095 tripartite motif-containing 62 [Homo sapiens] 100 2e-21
gi|16076875 tripartite motif-containing 7 isoform 4 [Homo sapiens] 100 4e-21
gi|198442878 tripartite motif-containing 17 isoform 3 [Homo sapi... 99 1e-20
gi|157426898 tripartite motif-containing 10 isoform 1 [Homo sapi... 97 4e-20
gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens] 97 5e-20
gi|37622899 ring finger protein 137 [Homo sapiens] 94 3e-19
gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo s... 93 7e-19
gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo s... 93 7e-19
gi|68160935 tripartite motif-containing 17 isoform 2 [Homo sapiens] 92 1e-18
gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens] 91 2e-18
gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens] 91 2e-18
>gi|38679905 tripartite motif-containing 65 [Homo sapiens]
Length = 517
Score = 1082 bits (2798), Expect = 0.0
Identities = 517/517 (100%), Positives = 517/517 (100%)
Query: 1 MAAQLLEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGKACPECREPFPDGAEL 60
MAAQLLEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGKACPECREPFPDGAEL
Sbjct: 1 MAAQLLEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGKACPECREPFPDGAEL 60
Query: 61 RRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVCTVR 120
RRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVCTVR
Sbjct: 61 RRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVCTVR 120
Query: 121 ECRLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACILASWV 180
ECRLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACILASWV
Sbjct: 121 ECRLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACILASWV 180
Query: 181 SGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARHGCRIRELLEQ 240
SGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARHGCRIRELLEQ
Sbjct: 181 SGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARHGCRIRELLEQ 240
Query: 241 VDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLCGLLLEEGSHPGAPAKP 300
VDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLCGLLLEEGSHPGAPAKP
Sbjct: 241 VDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLCGLLLEEGSHPGAPAKP 300
Query: 301 VDLAPVEAPGPLAPVPSTVCPLRRKLWQNYRNLTFDPVSANRHFYLSRQDQQVKHCRQSR 360
VDLAPVEAPGPLAPVPSTVCPLRRKLWQNYRNLTFDPVSANRHFYLSRQDQQVKHCRQSR
Sbjct: 301 VDLAPVEAPGPLAPVPSTVCPLRRKLWQNYRNLTFDPVSANRHFYLSRQDQQVKHCRQSR 360
Query: 361 GPGGPGSFELWQVQCAQSFQAGHHYWEVRASDHSVTLGVSYPQLPRCRLGPHTDNIGRGP 420
GPGGPGSFELWQVQCAQSFQAGHHYWEVRASDHSVTLGVSYPQLPRCRLGPHTDNIGRGP
Sbjct: 361 GPGGPGSFELWQVQCAQSFQAGHHYWEVRASDHSVTLGVSYPQLPRCRLGPHTDNIGRGP 420
Query: 421 CSWGLCVQEDSLQAWHNGEAQRLPGVSGRLLGMDLDLASGCLTFYSLEPQTQPLYTFHAL 480
CSWGLCVQEDSLQAWHNGEAQRLPGVSGRLLGMDLDLASGCLTFYSLEPQTQPLYTFHAL
Sbjct: 421 CSWGLCVQEDSLQAWHNGEAQRLPGVSGRLLGMDLDLASGCLTFYSLEPQTQPLYTFHAL 480
Query: 481 FNQPLTPVFWLLEGRTLTLCHQPGAVFPLGPQEEVLS 517
FNQPLTPVFWLLEGRTLTLCHQPGAVFPLGPQEEVLS
Sbjct: 481 FNQPLTPVFWLLEGRTLTLCHQPGAVFPLGPQEEVLS 517
>gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens]
Length = 511
Score = 138 bits (348), Expect = 1e-32
Identities = 139/515 (26%), Positives = 224/515 (43%), Gaps = 70/515 (13%)
Query: 6 LEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGKA--------------CPECR 51
L+ + TC+ICL L+++PV++ CGH+FC ACI W+R G CP+CR
Sbjct: 23 LQGEATCSICLELFREPVSVECGHSFCRACIGRCWERPGAGSVGAATRAPPFPLPCPQCR 82
Query: 52 EPFPDGAELRRNVALSGVLEVVR--AGPARDP---GPDPGPGPDPAARCPRHGRPLELFC 106
EP ++LR N L+ V ++R + PA P G AARC +HG P +L+C
Sbjct: 83 EP-ARPSQLRPNRQLAAVATLLRRFSLPAAAPGEHGSQAAAARAAAARCGQHGEPFKLYC 141
Query: 107 RTEGRCVCSVC-TVRECRLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQ 165
+ +GR +C VC RE R H LD + + L + L V +++ E +K+
Sbjct: 142 QDDGRAICVVCDRAREHREHAVLPLDEAVQEAKELLESRLRVLKKELEDCEVFRSTEKKE 201
Query: 166 SSQIQNSACILASWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLE 225
S ++ V +F +L L Q L +E + + + +L V +
Sbjct: 202 SKELLKQMAAEQEKVGAEFQALRAFLVEQEGRLLGRLEELSREVAQKQNENLAQLGVEIT 261
Query: 226 AVARHGCRIRELLEQVDEQTFLQE-----SQLLQPPGPLGPLTPLQWDEDQQLGDLKQLL 280
+++ +I+E ++ D FLQE S+ PGP T + + ++ ++
Sbjct: 262 QLSKLSSQIQETAQKPD-LDFLQEFKSTLSRCSNVPGP--KPTTVSSEMKNKVWNVSLKT 318
Query: 281 SRLCGLLLEEGSHPGAPAKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQNYR-NLTFDPVS 339
L G+L + LR +L + + LT DP +
Sbjct: 319 FVLKGMLKKFKE----------------------------DLRGELEKEEKVELTLDPDT 350
Query: 340 ANRHFYLSRQDQQVKHCRQSRG-PGGPGSFEL-WQVQCAQSFQAGHHYWEVR-ASDHSVT 396
AN LS + V+ +++ P P F+ +V + F +G H+WEV S
Sbjct: 351 ANPRLILSLDLKGVRLGERAQDLPNHPCRFDTNTRVLASCGFSSGRHHWEVEVGSKDGWA 410
Query: 397 LGVSYPQLPRCRLGPHTDNIGRGPCSWGLCVQEDSLQAWHNGEAQRLPGVSGRL--LGMD 454
GV+ + R L P T G W L Q + Q W +R P G L + +
Sbjct: 411 FGVARESVRRKGLTPFTPEEG----VWAL--QLNGGQYWAVTSPERSPLSCGHLSRVRVA 464
Query: 455 LDLASGCLTFYSLEPQTQPLYTFHALFNQPLTPVF 489
LDL G ++FY++E + LYTF F + + P+F
Sbjct: 465 LDLEVGAVSFYAVE-DMRHLYTFRVNFQERVFPLF 498
>gi|68160937 tripartite motif-containing 25 [Homo sapiens]
Length = 630
Score = 130 bits (327), Expect = 3e-30
Identities = 145/627 (23%), Positives = 226/627 (36%), Gaps = 138/627 (22%)
Query: 6 LEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGK--ACPECREPFPDGAELRRN 63
L E+L+C+ICL +++PVT PCGHNFCG+C+ + W G CP+CR + +L +N
Sbjct: 7 LAEELSCSICLEPFKEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQCRAVYQARPQLHKN 66
Query: 64 VALSGVLE-VVRAGPARDPGPD--------PGPGPDPAARC------------------- 95
L V+E ++A AR+P D P P+ C
Sbjct: 67 TVLCNVVEQFLQADLAREPPADVWTPPARASAPSPNAQVACDHCLKEAAVKTCLVCMASF 126
Query: 96 -------------------------------PRHGRPLELFCRTEGRCVCSVCTVRECRL 124
+H R E FC C+C +C V E +
Sbjct: 127 CQEHLQPHFDSPAFQDHPLQPPVRDLLRRKCSQHNRLREFFCPEHSECICHICLV-EHKT 185
Query: 125 HERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACILASWVSGKF 184
A L EA LR L V Q A L ++R + ++ +A + ++
Sbjct: 186 CSPASLSQASADLEATLRHKLTVMYSQINGASRALDDVRNRQQDVRMTANRKVEQLQQEY 245
Query: 185 SSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARHGCRIRELLEQVDEQ 244
+ + L+ TT+ R I+ + + ++ Q L + I + L + DE
Sbjct: 246 TEMKALLDASETTSTRKIKEEEKRVNSKFDTIYQILLKKKSEIQTLKEEIEQSLTKRDEF 305
Query: 245 TFLQESQLLQPPGPLGPLTP-------LQWDEDQQLGDLKQLLSRLCGLLLE-------E 290
FL+++ L+ P L Q DLK L + G L E
Sbjct: 306 EFLEKASKLRGISTKPVYIPEVELNHKLIKGIHQSTIDLKNELKQCIGRLQEPTPSSGDP 365
Query: 291 GSH-------------------------PGAPAKPVDLAPVEAPGPLAPVPST------- 318
G H P PA P L AP L +
Sbjct: 366 GEHDPASTHKSTRPVKKVSKEEKKSKKPPPVPALPSKLPTFGAPEQLVDLKQAGLEAAAK 425
Query: 319 -------------------VCPLRRKLWQNYRNLTFDPVSANRHFYLSR--QDQQVKHCR 357
+ R +L + Y + D +A+ LS V
Sbjct: 426 ATSSHPNSTSLKAKVLETFLAKSRPELLEYYIKVILDYNTAHNKVALSECYTVASVAEMP 485
Query: 358 QSRGPGGPGSFELWQVQCAQSFQAGHHYWEVRASDHSVT-LGVSYPQLPRCRLGPHTDNI 416
Q+ P QV ++ G HYWEV ++ +G+ Y + R GP + +
Sbjct: 486 QNYRPHPQRFTYCSQVLGLHCYKKGIHYWEVELQKNNFCGVGICYGSMN--RQGPES-RL 542
Query: 417 GRGPCSWGLCVQ--EDSLQAWHNGEAQRLPGVSGRLLGMDLDLASGCLTFYSLEPQTQPL 474
GR SW CV+ + AWHN + LP +G+ L+ G + F+++ + +
Sbjct: 543 GRNSASW--CVEWFNTKISAWHNNVEKTLPSTKATRVGVLLNCDHGFVIFFAVADKVHLM 600
Query: 475 YTFHALFNQPLTPVFWLLE-GRTLTLC 500
Y F F + L P FW+ G TL++C
Sbjct: 601 YKFRVDFTEALYPAFWVFSAGATLSIC 627
>gi|21630277 tripartite motif-containing 11 [Homo sapiens]
Length = 468
Score = 129 bits (323), Expect = 8e-30
Identities = 156/522 (29%), Positives = 221/522 (42%), Gaps = 95/522 (18%)
Query: 6 LEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDR--CGKACPECREPFPDGAELRRN 63
L+E+ TCAICL + DPV CGHNFC CIR W + ACPECRE P LR N
Sbjct: 10 LQEEATCAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECRELSPQ-RNLRPN 68
Query: 64 VALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVC--TVRE 121
L+ + E+ AR P P P P CP H PL FC E R +C+ C +
Sbjct: 69 RPLAKMAEM-----ARRLHP---PSPVPQGVCPAHREPLAAFCGDELRLLCAACERSGEH 120
Query: 122 CRLHERALLD-AERLKREAQLRASLEVTQQQATQA--------EGQLLELRKQSSQIQNS 172
R L D AE LK A+L SLE ++Q A E +L + SQ QN
Sbjct: 121 WAHRVRPLQDAAEDLK--AKLEKSLEHLRKQMQDALLFQAQADETCVLWQKMVESQRQN- 177
Query: 173 ACILASWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARHGC 232
V G+F L + L + L+ +E + + L RLR + +
Sbjct: 178 -------VLGEFERLRRLLAEEEQQLLQRLEEEELEVL-------PRLREGAAHLGQQSA 223
Query: 233 RIRELLEQVDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLCGLLLEEGS 292
+ EL+ +++ + L LLQ D+K L R+ + L+
Sbjct: 224 HLAELIAELEGRCQLPALGLLQ--------------------DIKDALRRVQDVKLQ--- 260
Query: 293 HPGAPAKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQNYR-NLTFDPVSANRHFYLSRQDQ 351
P ++ P+E + VP V LRR +R ++T DP +AN LS +
Sbjct: 261 -------PPEVVPMEL-RTVCRVPGLVETLRR-----FRGDVTLDPDTANPELILSEDRR 307
Query: 352 QVKH--CRQSRGPGGPGSFELWQVQCAQS-FQAGHHYWEVRASDH-SVTLGVSYPQLPRC 407
V+ RQ+ P P F+ Q F +G HYWEV D S LGV + R
Sbjct: 308 SVQRGDLRQAL-PDSPERFDPGPCVLGQERFTSGRHYWEVEVGDRTSWALGVCRENVNRK 366
Query: 408 RLGPHTDNIGRGPCSWGLCVQEDSLQAWHNGEAQRLPGVSG--RLLGMDLDLASGCLTFY 465
G + G W L L +++N + L + R +G+ LD +G L+FY
Sbjct: 367 EKG----ELSAGNGFWILVF----LGSYYNSSERALAPLRDPPRRVGIFLDYEAGHLSFY 418
Query: 466 SLEPQTQPLYTFHAL-FNQPLTPVFWLLEG--RTLTLCHQPG 504
S + L+ F + F+ L P+F L +T+C G
Sbjct: 419 SATDGSL-LFIFPEIPFSGTLRPLFSPLSSSPTPMTICRPKG 459
>gi|112421127 tripartite motif-containing 58 [Homo sapiens]
Length = 486
Score = 125 bits (315), Expect = 7e-29
Identities = 134/507 (26%), Positives = 218/507 (42%), Gaps = 71/507 (14%)
Query: 6 LEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCG------KACPECREPF-PDGA 58
L E C +CL Q+PV++ CGH+FC CI ++ ++ ACP+CR PF P G
Sbjct: 10 LREDARCPVCLDFLQEPVSVDCGHSFCLRCISEFCEKSDGAQGGVYACPQCRGPFRPSG- 68
Query: 59 ELRRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVCT 118
R N L+G++E VR G GPG A RC RHG L FC + +C VC
Sbjct: 69 -FRPNRQLAGLVESVRR-----LGLGAGPG---ARRCARHGEDLSRFCEEDEAALCWVCD 119
Query: 119 V-RECRLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACILA 177
E R H A L + +L+ +LE+ +++ A Q + K++ + +
Sbjct: 120 AGPEHRTHRTAPLQEAAGSYQVKLQMALELMRKELEDALTQEANVGKKTVIWKEKVEMQR 179
Query: 178 SWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARHGCRIREL 237
+F L + LR +E + L + R+ + RL +A ++EL
Sbjct: 180 QRFRLEFEKHRGFLAQEEQRQLRRLEAEERATLQRLRESKSRLVQQSKA-------LKEL 232
Query: 238 LEQVDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLCGLLLEEGSHPGAP 297
+++ E+ Q P LG LL + G+L +
Sbjct: 233 ADELQER--------CQRPA-LG------------------LLEGVRGVLSRSKAVTRLE 265
Query: 298 AKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQNYR-NLTFDPVSANRHFYLSRQDQQVKHC 356
A+ + P+ + P RR+L + ++ ++ DP +A+ L+ + V+
Sbjct: 266 AENI---------PMELKTACCIPGRRELLRKFQVDVKLDPATAHPSLLLTADLRSVQDG 316
Query: 357 RQSRG-PGGPGSFELWQ-VQCAQSFQAGHHYWEVRASDHSV-TLGVSYPQLPRCRLGPHT 413
R P P F+ W + QSF +G HYWEV + + LGV LP R G T
Sbjct: 317 EPWRDVPNNPERFDTWPCILGLQSFSSGRHYWEVLVGEGAEWGLGVCQDTLP--RKGETT 374
Query: 414 DNIGRGPCSWGL-CVQEDSLQAWHNGEAQRLPGVSGRLLGMDLDLASGCLTFYSLEPQTQ 472
+ G W L ++ + + L S R +G+ LD +G ++FY++ +
Sbjct: 375 PSPENG--VWALWLLKGNEYMVLASPSVPLLQLESPRCIGIFLDYEAGEISFYNVTDGSY 432
Query: 473 PLYTFHALFNQPLTPVFWLLEGRTLTL 499
+YTF+ LF+ L P F++ + L L
Sbjct: 433 -IYTFNQLFSGLLRPYFFICDATPLIL 458
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 115 bits (288), Expect = 1e-25
Identities = 124/508 (24%), Positives = 205/508 (40%), Gaps = 49/508 (9%)
Query: 2 AAQLLEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGK--ACPECREPFPDGAE 59
A + L+ + +C++CL ++PV + CGHNFC ACI WW+ + CP CR+
Sbjct: 19 ALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKT-SRYRS 77
Query: 60 LRRNVALSGVLEVVRAGPA-----RDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVC 114
LR N L ++E+ + A RD + CP+H L LFC + VC
Sbjct: 78 LRPNRQLGSMVEIAKQLQAVKRKIRD-----------ESLCPQHHEALSLFCYEDQEAVC 126
Query: 115 SVCTVREC-RLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSA 173
+C + R H LD + + +L+ LE +Q+ + K+ +++
Sbjct: 127 LICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLV 186
Query: 174 CILASWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARD------EEQRLRVHLEAV 227
+ +F L + L+ + L +E + L + R+ +++R HL A
Sbjct: 187 ESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAE 246
Query: 228 ARHGCRIRELLEQVDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLCGLL 287
C D ++ L+++ + G L + P D K LL GL+
Sbjct: 247 VEGKCLQSGFEMLKDVKSTLEKNIPRKFGGSLSTICP---------RDHKALL----GLV 293
Query: 288 LEEGSHPGAPAKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQNYRNLTFDPVSANRHFYLS 347
E V +E + P LR+ L Q ++T DP +A+ + LS
Sbjct: 294 KEINRCEKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLS 353
Query: 348 RQDQQVK--HCRQSRGPGGPGSFELWQ-VQCAQSFQAGHHYWEVRASDHS-VTLGVSYPQ 403
+ VK R P P F + V + F +G HYWEV D + +GV
Sbjct: 354 EDRKSVKFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDS 413
Query: 404 LPR-CRLGPHTDNIGRGPCSWGLCVQEDSLQAWHNGEAQRLPGVSGRLLGMDLDLASGCL 462
+ R L P + W D A V + +G+ LD +G L
Sbjct: 414 VSRKGELTPLPETGYWRVRLW----NGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTL 469
Query: 463 TFYSLEPQTQPLYTFHALFNQPLTPVFW 490
+FY++ ++ +YTF F + L P+F+
Sbjct: 470 SFYNVTDRSH-IYTFTDTFTEKLWPLFY 496
>gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 115 bits (287), Expect = 1e-25
Identities = 145/518 (27%), Positives = 219/518 (42%), Gaps = 95/518 (18%)
Query: 3 AQLLEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRC-GK----------ACPECR 51
A+ L+E+ TC+ICL + DPV CGHNFC ACI+ W++ GK CPECR
Sbjct: 7 ARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECR 66
Query: 52 EPFPDGAELRRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGR 111
E P L N L+ V E+ + PG C H PL+LFC+ +
Sbjct: 67 EMSPQ-RNLLPNRLLTKVAEMAQ----------QHPGLQKQDLCQEHHEPLKLFCQKDQS 115
Query: 112 CVCSVC-TVRECRLHERALLDAERLKR--EAQLRASLEVTQQQATQAEGQLLELRKQSSQ 168
+C VC RE RLH +L AE + + +L +E ++Q T+ G L +QS
Sbjct: 116 PICVVCRESREHRLHR--VLPAEEAVQGYKLKLEEDMEYLREQITRT-GNLQAREEQS-- 170
Query: 169 IQNSACILASWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQ-----RLRVH 223
LA W GK + + ++ + V + Q L QA + E+ RLR
Sbjct: 171 -------LAEW-QGKVKERRERIVLEF-EKMNLYLVEEEQRLLQALETEEEETASRLRES 221
Query: 224 LEAVARHGCRIRELLEQVDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRL 283
+ + R G + LL Q++E++ GPL Q L D+K+ LSR
Sbjct: 222 VACLDRQGHSLELLLLQLEERS---------TQGPL-----------QMLQDMKEPLSRK 261
Query: 284 CGLLLEEGSHPGAPAKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQNYRNLTFDPVSANRH 343
+ ++ P ++AP P + VP + LR L ++ D SA +
Sbjct: 262 NNVSVQ------CP----EVAPPTRPRTVCRVPGQIEVLRGFL----EDVVPDATSAYPY 307
Query: 344 --FYLSRQDQQVKHCRQSRGPGGPGSFELWQVQCAQ-SFQAGHHYWEVR---ASDHSVTL 397
Y SRQ + + + G F + Q +F +G HYWEV D L
Sbjct: 308 LLLYESRQRRYLGSSPEGSGFCSKDRFVAYPCAVGQTAFSSGRHYWEVGMNITGDALWAL 367
Query: 398 GVSYPQLPRCRLGPHTDNIGRGPCSWGLCVQEDSLQAWHNGEAQRLPGV---SGRLLGMD 454
GV + R D + + P + VQ + + + P + +G+
Sbjct: 368 GVCRDNVSR------KDRVPKCPENGFWVVQLSKGTKYLSTFSALTPVMLMEPPSHMGIF 421
Query: 455 LDLASGCLTFYSLEPQTQPLYTF-HALFNQPLTPVFWL 491
LD +G ++FYS+ + L+T+ A F PL P F L
Sbjct: 422 LDFEAGEVSFYSVSDGSH-LHTYSQATFPGPLQPFFCL 458
>gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 115 bits (287), Expect = 1e-25
Identities = 145/518 (27%), Positives = 219/518 (42%), Gaps = 95/518 (18%)
Query: 3 AQLLEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRC-GK----------ACPECR 51
A+ L+E+ TC+ICL + DPV CGHNFC ACI+ W++ GK CPECR
Sbjct: 7 ARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECR 66
Query: 52 EPFPDGAELRRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGR 111
E P L N L+ V E+ + PG C H PL+LFC+ +
Sbjct: 67 EMSPQ-RNLLPNRLLTKVAEMAQ----------QHPGLQKQDLCQEHHEPLKLFCQKDQS 115
Query: 112 CVCSVC-TVRECRLHERALLDAERLKR--EAQLRASLEVTQQQATQAEGQLLELRKQSSQ 168
+C VC RE RLH +L AE + + +L +E ++Q T+ G L +QS
Sbjct: 116 PICVVCRESREHRLHR--VLPAEEAVQGYKLKLEEDMEYLREQITRT-GNLQAREEQS-- 170
Query: 169 IQNSACILASWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQ-----RLRVH 223
LA W GK + + ++ + V + Q L QA + E+ RLR
Sbjct: 171 -------LAEW-QGKVKERRERIVLEF-EKMNLYLVEEEQRLLQALETEEEETASRLRES 221
Query: 224 LEAVARHGCRIRELLEQVDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRL 283
+ + R G + LL Q++E++ GPL Q L D+K+ LSR
Sbjct: 222 VACLDRQGHSLELLLLQLEERS---------TQGPL-----------QMLQDMKEPLSRK 261
Query: 284 CGLLLEEGSHPGAPAKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQNYRNLTFDPVSANRH 343
+ ++ P ++AP P + VP + LR L ++ D SA +
Sbjct: 262 NNVSVQ------CP----EVAPPTRPRTVCRVPGQIEVLRGFL----EDVVPDATSAYPY 307
Query: 344 --FYLSRQDQQVKHCRQSRGPGGPGSFELWQVQCAQ-SFQAGHHYWEVR---ASDHSVTL 397
Y SRQ + + + G F + Q +F +G HYWEV D L
Sbjct: 308 LLLYESRQRRYLGSSPEGSGFCSKDRFVAYPCAVGQTAFSSGRHYWEVGMNITGDALWAL 367
Query: 398 GVSYPQLPRCRLGPHTDNIGRGPCSWGLCVQEDSLQAWHNGEAQRLPGV---SGRLLGMD 454
GV + R D + + P + VQ + + + P + +G+
Sbjct: 368 GVCRDNVSR------KDRVPKCPENGFWVVQLSKGTKYLSTFSALTPVMLMEPPSHMGIF 421
Query: 455 LDLASGCLTFYSLEPQTQPLYTF-HALFNQPLTPVFWL 491
LD +G ++FYS+ + L+T+ A F PL P F L
Sbjct: 422 LDFEAGEVSFYSVSDGSH-LHTYSQATFPGPLQPFFCL 458
>gi|157743261 tripartite motif-containing 75 [Homo sapiens]
Length = 468
Score = 113 bits (283), Expect = 4e-25
Identities = 107/502 (21%), Positives = 209/502 (41%), Gaps = 56/502 (11%)
Query: 6 LEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGK--ACPECREPFPDGAELRRN 63
L+ + C+ICL DPVT+ CGHNFC +CI+ W + CP CR +G R N
Sbjct: 10 LQAEAKCSICLDYLSDPVTIECGHNFCRSCIQQSWLDLQELFPCPVCRHQCQEG-HFRSN 68
Query: 64 VALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVCT-VREC 122
L ++E+ + + + C +H +PL +FC+ + +C +CT +
Sbjct: 69 TQLGRMIEIAKLLQSTKSNKRK---QEETTLCEKHNQPLSVFCKEDLMVLCPLCTQPPDH 125
Query: 123 RLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACILASWVSG 182
+ H ++ + + + ++ ++Q + + K+ +++ +S
Sbjct: 126 QGHHVRPIEKAAIHYRKRFCSYIQPLKKQLADLQKLISTQSKKPLELREMVENQRQELSS 185
Query: 183 KFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARHGCRIRELLEQVD 242
+F L Q L+ R + ++ + +D +Q+L ++ A + + ++ L +V
Sbjct: 186 EFEHLNQFLD-------REQQAVLSRLAEEEKDNQQKLSANITAFSNYSATLKSQLSKVV 238
Query: 243 EQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLCGLLLEEGSHPGAPAKPVD 302
E + L E +L L +K + E + +P+
Sbjct: 239 ELSELSELEL--------------------LSQIK---------IFYESENESSPS---- 265
Query: 303 LAPVEAPGPLAPVPSTVCPLRRKLWQNYRNLTFDPVSANRHFYLSRQDQQVKHC-RQSRG 361
+ + P L+R + + + DP +A+ + +S ++V+ R+ +
Sbjct: 266 IFSIHLKRDGCSFPPQYSALQRIIKKFKVEIILDPETAHPNLIVSEDKKRVRFTKRKQKV 325
Query: 362 PGGPGSFELWQVQCA-QSFQAGHHYWEVRASDHSV-TLGVSYPQLPRCRLGPHTDNIGRG 419
PG P F + V F +G H+WE+ D S +G+ LP P + +
Sbjct: 326 PGFPKRFTVKPVVLGFPYFHSGRHFWEIEVGDKSEWAIGICKDSLPTKARRPSS---AQQ 382
Query: 420 PCSWGLCVQEDSLQAWHNGEAQRLPGVSGRLLGMDLDLASGCLTFYSLEPQTQPLYTFHA 479
C W + +Q+D A L V R +G+ LD G ++FY++ ++ + TF
Sbjct: 383 EC-WRIELQDDGYHAPGAFPTPLLLEVKARAIGIFLDYEMGEISFYNMAEKSH-ICTFTD 440
Query: 480 LFNQPLTPVFWL-LEGRTLTLC 500
F PL P F++ + + L +C
Sbjct: 441 TFTGPLRPYFYVGPDSQPLRIC 462
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 112 bits (280), Expect = 8e-25
Identities = 127/503 (25%), Positives = 203/503 (40%), Gaps = 69/503 (13%)
Query: 2 AAQLLEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGK--ACPECREPFPDGAE 59
A + L+ + +C++CL ++PV + CGHNFC ACI WW+ + CP CR+
Sbjct: 19 ALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKT-SRYRS 77
Query: 60 LRRNVALSGVLEVVRAGPA-----RDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVC 114
LR N L ++E+ + A RD + CP+H L LFC + VC
Sbjct: 78 LRPNRQLGSMVEIAKQLQAVKRKIRD-----------ESLCPQHHEALSLFCYEDQEAVC 126
Query: 115 SVCTVREC-RLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSA 173
+C + R H LD + + +L+ LE +Q +L E+ + S +
Sbjct: 127 LICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQ-------KLQEITRCKSSEEKKP 179
Query: 174 CILASWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARH-GC 232
L V + +L+ E H R ++ + L++ +EEQ + L A H G
Sbjct: 180 GELKRLVESRRQQILREFEELH----RRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGD 235
Query: 233 RIRELLEQVDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLCGLLLEEGS 292
+ R+L E E + LQ + L D+K L + + E
Sbjct: 236 KRRDLAHLAAE----VEGKCLQ-------------SGFEMLKDVKSTLEKCEKVKTME-- 276
Query: 293 HPGAPAKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQNYRNLTFDPVSANRHFYLSRQDQQ 352
V +E + P LR+ L Q ++T DP +A+ + LS +
Sbjct: 277 --------VTSVSIELEKNFSNFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKS 328
Query: 353 VK--HCRQSRGPGGPGSFELWQ-VQCAQSFQAGHHYWEVRASDHS-VTLGVSYPQLPR-C 407
VK R P P F + V + F +G HYWEV D + +GV + R
Sbjct: 329 VKFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKG 388
Query: 408 RLGPHTDNIGRGPCSWGLCVQEDSLQAWHNGEAQRLPGVSGRLLGMDLDLASGCLTFYSL 467
L P + W D A V + +G+ LD +G L+FY++
Sbjct: 389 ELTPLPETGYWRVRLW----NGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNV 444
Query: 468 EPQTQPLYTFHALFNQPLTPVFW 490
++ +YTF F + L P+F+
Sbjct: 445 TDRSH-IYTFTDTFTEKLWPLFY 466
>gi|5730009 ret finger protein [Homo sapiens]
Length = 513
Score = 109 bits (273), Expect = 5e-24
Identities = 136/527 (25%), Positives = 212/527 (40%), Gaps = 95/527 (18%)
Query: 3 AQLLEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWD--RCGKACPECREPFPDGAEL 60
A+ L+++ TC +CL + +P+ L CGHN C AC+ W +CP+CRE FP +
Sbjct: 7 AECLQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETFPQ-RHM 65
Query: 61 RRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVC-TV 119
R N L+ V ++V+ P GPG + C +H PL+L+C + +C VC
Sbjct: 66 RPNRHLANVTQLVKQLRTERPS---GPGGEMGV-CEKHREPLKLYCEEDQMPICVVCDRS 121
Query: 120 RECRLH-------------ERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQS 166
RE R H E+ + LKR L+ + + Q QA +LL L
Sbjct: 122 REHRGHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLK---KRRRAQGEQARAELLSL---- 174
Query: 167 SQIQNSACILASWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLE- 225
+Q++ + W +F L +L+ +H L AR EE L ++
Sbjct: 175 TQMEREKIV---W---EFEQLYHSLK-EHEYRL------------LARLEELDLAIYNSI 215
Query: 226 --AVARHGCRI---RELLEQVDEQTFLQESQLLQPPGPLGPLT-----PLQWDEDQQLGD 275
A+ + C I L+ Q++E+ +LLQ G P W L +
Sbjct: 216 NGAITQFSCNISHLSSLIAQLEEKQQQPTRELLQDIGDTLSRAERIRIPEPWITPPDLQE 275
Query: 276 LKQLLSRLCGLLLEEGSHPGAPAKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQNYRNLTF 335
+ ++ C L L E D+ ++ R+ ++T
Sbjct: 276 KIHIFAQKC-LFLTESLKQFTEKMQSDMEKIQE--------------LREAQLYSVDVTL 320
Query: 336 DPVSANRHFYLSRQDQQVKHC-RQSRGPGGPGSFELWQ-VQCAQSFQAGHHYWEVRASDH 393
DP +A LS +QV++ Q P P F L+ V + F AG HYWEV D
Sbjct: 321 DPDTAYPSLILSDNLRQVRYSYLQQDLPDNPERFNLFPCVLGSPCFIAGRHYWEVEVGDK 380
Query: 394 SV-TLGVSYPQLPRCRLGPHTDNIGRGPCSWGLCVQEDSLQAWHNGEAQRLPGVSGRL-- 450
+ T+GV + CR G T G W ++ W+ E L L
Sbjct: 381 AKWTIGVCEDSV--CRKGGVTSAPQNG--FW-------AVSLWYGKEYWALTSPMTALPL 429
Query: 451 ------LGMDLDLASGCLTFYSLEPQTQPLYTFHALFNQPLTPVFWL 491
+G+ LD +G ++FY++ + HA F P+ P F L
Sbjct: 430 RTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPYFSL 476
>gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo
sapiens]
Length = 500
Score = 108 bits (269), Expect = 2e-23
Identities = 138/538 (25%), Positives = 215/538 (39%), Gaps = 100/538 (18%)
Query: 1 MAAQLLEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGK--ACPECREPFPDGA 58
M A+ ++E+LTC ICL +QDPV++ CGHNFC C+ W G CPECR P A
Sbjct: 1 MEAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPSAPAA 60
Query: 59 ELRRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVC- 117
LR N AL+ + E + GP P C RH PL LFC + R VC VC
Sbjct: 61 -LRPNWALARLTEKTQRRRL---------GPVPPGLCGRHWEPLRLFCEDDQRPVCLVCR 110
Query: 118 TVRECRLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACILA 177
+E + H A +D E + + V + + L +++ +++ ++A
Sbjct: 111 ESQEHQTHAMAPID-EAFESYRTGNFDIHVDEWKRRLIRLLLYHSKQEEKLLKSQRNLVA 169
Query: 178 SWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARHGCRIREL 237
K LQ +E+++ T + + + QR+R+ E H + E
Sbjct: 170 KM---KKVMHLQDVEVKNATQWKD------------KIKSQRMRISTEFSKLHNFLVEE- 213
Query: 238 LEQVDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGD----LKQLLSRLCGLLLEEGSH 293
E FLQ L + + ++L + L Q ++ L L+LE G
Sbjct: 214 -----EDLFLQR------------LNKEEEETKKKLNENTLKLNQTIASLKKLILEVGEK 256
Query: 294 PGAPAKPVDLAPVEA----------PGPLAPVPSTVC--PLRRKLWQNYR---NLTFDPV 338
AP + P E A TVC PL +++ + ++ NL D
Sbjct: 257 SQAPTLELLQNPKEVLTRSEIQDVNYSLEAVKVKTVCQIPLMKEMLKRFQVAVNLAED-- 314
Query: 339 SANRHFYLSRQDQQVKHCRQS----------------RGPGGPGSFELWQ----VQCAQS 378
+A+ S++ + VK+ + R P E +Q V
Sbjct: 315 TAHPKLVFSQEGRYVKNTASASSWPVFSSAWNYFAGWRNPQKTAFVERFQHLPCVLGKNV 374
Query: 379 FQAGHHYWEVRASDH-SVTLGVSYPQL----PRCRLGPHTDNIGRGPCSWGLCVQEDSLQ 433
F +G HYWEV + D V +GV + R ++ P ++G W L
Sbjct: 375 FTSGKHYWEVESRDSLEVAVGVCREDVMGITDRSKMSP---DVGIWAIYWS-AAGYWPLI 430
Query: 434 AWHNGEAQRLPGVSGRLLGMDLDLASGCLTFYSLEPQTQPLYTFHALFNQPLTPVFWL 491
+ Q+ P + +G+ LD +G ++FYS L+TF L P FWL
Sbjct: 431 GFPGTPTQQEPAL--HRVGVYLDRGTGNVSFYSAVDGVH-LHTFSCSSVSRLRPFFWL 485
>gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo
sapiens]
Length = 474
Score = 106 bits (265), Expect = 4e-23
Identities = 134/503 (26%), Positives = 215/503 (42%), Gaps = 56/503 (11%)
Query: 1 MAAQLLEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGK--ACPECREPFPDGA 58
M A+ ++E+LTC ICL +QDPV++ CGHNFC C+ W G CPECR P A
Sbjct: 1 MEAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPSAPAA 60
Query: 59 ELRRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVC- 117
LR N AL+ + E + GP P C RH PL LFC + R VC VC
Sbjct: 61 -LRPNWALARLTEKTQRRRL---------GPVPPGLCGRHWEPLRLFCEDDQRPVCLVCR 110
Query: 118 TVRECRLHERALLD-AERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACIL 176
+E + H A +D A RE L++ + + Q +E+ K ++Q ++
Sbjct: 111 ESQEHQTHAMAPIDEAFESYREKLLKSQRNLVAKMKKVMHLQDVEV-KNATQWKDKIKSQ 169
Query: 177 ASWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARHGCRIRE 236
+S +FS L L + L+ + + + + + +L + + +++
Sbjct: 170 RMRISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIAS-------LKK 222
Query: 237 LLEQVDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLCGL-LLEEGSHPG 295
L+ +V E++ +LLQ P + + +Q D + L +K + +C + L++E
Sbjct: 223 LILEVGEKSQAPTLELLQNPKEVLTRSEIQ-DVNYSLEAVK--VKTVCQIPLMKEMLKRF 279
Query: 296 APAKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQNYRNLTFDPV--SANRHFYLSRQDQQV 353
A V+LA A P V + +N + + PV SA +F R Q+
Sbjct: 280 QVA--VNLAEDTAH------PKLVFSQEGRYVKNTASASSWPVFSSAWNYFAGWRNPQKT 331
Query: 354 KHCRQSRGPGGPGSFELWQVQCAQSFQAGHHYWEVRASDH-SVTLGVSYPQL----PRCR 408
+ + L V F +G HYWEV + D V +GV + R +
Sbjct: 332 AFVERFQ--------HLPCVLGKNVFTSGKHYWEVESRDSLEVAVGVCREDVMGITDRSK 383
Query: 409 LGPHTDNIGRGPCSWGLCVQEDSLQAWHNGEAQRLPGVSGRLLGMDLDLASGCLTFYSLE 468
+ P ++G W L + Q+ P + +G+ LD +G ++FYS
Sbjct: 384 MSP---DVGIWAIYWS-AAGYWPLIGFPGTPTQQEPAL--HRVGVYLDRGTGNVSFYSAV 437
Query: 469 PQTQPLYTFHALFNQPLTPVFWL 491
L+TF L P FWL
Sbjct: 438 DGVH-LHTFSCSSVSRLRPFFWL 459
>gi|15208665 tripartite motif protein TRIM14 isoform alpha [Homo
sapiens]
Length = 442
Score = 103 bits (258), Expect = 3e-22
Identities = 113/423 (26%), Positives = 177/423 (41%), Gaps = 33/423 (7%)
Query: 94 RCPRHG-RPLELFCRTEGRCVCSVCTVRECR------LHERALLDAERLKREAQLRASLE 146
RCP HG R ELFCR RCVC++C V L A + ++L +E + L
Sbjct: 23 RCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGLALEAAVHVQKLSQECLKQ--LA 80
Query: 147 VTQQQATQAEGQLLELRKQSSQIQNSACILASWVSGKFSSLLQALEIQHTTALRSIEVAK 206
+ +QQ + ++ + +++ +A +W+ GKF+ L L+ + A + I+
Sbjct: 81 IKKQQHID---NITQIEDATEKLKANAESSKTWLKGKFTELRLLLDEEEALAKKFIDKNT 137
Query: 207 TQALAQARDEEQRLRVHLEAVARHGCRIRELLEQVDE----QTFLQESQLLQPPGPLGPL 262
L R++ R L+ + R+ + ++ D Q + Q +Q LG L
Sbjct: 138 QLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQAYTATEQEMQQQMSLGEL 197
Query: 263 ---TPLQWDEDQQLGDLKQLLSRLCGLLLEEGSHPGAPAKPVDLAPVEAPGPLAPVPSTV 319
PL ++ + K L+ + L + L+ + P + ++
Sbjct: 198 CHPVPLSFEPVKSF--FKGLVEAVESTLQTPLDIRLKESINCQLSDPSSTKPGTLLKTSP 255
Query: 320 CPLRRKLWQNYRNLTFDPVSANRHFYLSRQDQQVKHCRQ--SRGPGGPGSFE-LWQVQCA 376
P R L + R T DP + + LS D+ C S GP F+ LWQV
Sbjct: 256 SPERSLLLKYARTPTLDPDTMHARLRLSA-DRLTVRCGLLGSLGPVPVLRFDALWQVLAR 314
Query: 377 QSFQAGHHYWEVRASDHSVT--LGVSYPQLPRCRLGPHTDNIGRGPCSWGLCVQEDSLQA 434
F G HYWEV + +G +Y L R R +G SW C++ L+
Sbjct: 315 DCFATGRHYWEVDVQEAGAGWWVGAAYASLRR-RGASAAARLGCNRQSW--CLKRYDLEY 371
Query: 435 W--HNGEAQRL-PGVSGRLLGMDLDLASGCLTFYSLEPQTQPLYTFHALFNQPLTPVFWL 491
W H+G+ RL P LG+ LD +G L FY + L+TF A F +PL P L
Sbjct: 372 WAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRATFQEPLYPALRL 431
Query: 492 LEG 494
EG
Sbjct: 432 WEG 434
>gi|15208663 tripartite motif protein TRIM14 isoform alpha [Homo
sapiens]
Length = 442
Score = 103 bits (258), Expect = 3e-22
Identities = 113/423 (26%), Positives = 177/423 (41%), Gaps = 33/423 (7%)
Query: 94 RCPRHG-RPLELFCRTEGRCVCSVCTVRECR------LHERALLDAERLKREAQLRASLE 146
RCP HG R ELFCR RCVC++C V L A + ++L +E + L
Sbjct: 23 RCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGLALEAAVHVQKLSQECLKQ--LA 80
Query: 147 VTQQQATQAEGQLLELRKQSSQIQNSACILASWVSGKFSSLLQALEIQHTTALRSIEVAK 206
+ +QQ + ++ + +++ +A +W+ GKF+ L L+ + A + I+
Sbjct: 81 IKKQQHID---NITQIEDATEKLKANAESSKTWLKGKFTELRLLLDEEEALAKKFIDKNT 137
Query: 207 TQALAQARDEEQRLRVHLEAVARHGCRIRELLEQVDE----QTFLQESQLLQPPGPLGPL 262
L R++ R L+ + R+ + ++ D Q + Q +Q LG L
Sbjct: 138 QLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQAYTATEQEMQQQMSLGEL 197
Query: 263 ---TPLQWDEDQQLGDLKQLLSRLCGLLLEEGSHPGAPAKPVDLAPVEAPGPLAPVPSTV 319
PL ++ + K L+ + L + L+ + P + ++
Sbjct: 198 CHPVPLSFEPVKSF--FKGLVEAVESTLQTPLDIRLKESINCQLSDPSSTKPGTLLKTSP 255
Query: 320 CPLRRKLWQNYRNLTFDPVSANRHFYLSRQDQQVKHCRQ--SRGPGGPGSFE-LWQVQCA 376
P R L + R T DP + + LS D+ C S GP F+ LWQV
Sbjct: 256 SPERSLLLKYARTPTLDPDTMHARLRLSA-DRLTVRCGLLGSLGPVPVLRFDALWQVLAR 314
Query: 377 QSFQAGHHYWEVRASDHSVT--LGVSYPQLPRCRLGPHTDNIGRGPCSWGLCVQEDSLQA 434
F G HYWEV + +G +Y L R R +G SW C++ L+
Sbjct: 315 DCFATGRHYWEVDVQEAGAGWWVGAAYASLRR-RGASAAARLGCNRQSW--CLKRYDLEY 371
Query: 435 W--HNGEAQRL-PGVSGRLLGMDLDLASGCLTFYSLEPQTQPLYTFHALFNQPLTPVFWL 491
W H+G+ RL P LG+ LD +G L FY + L+TF A F +PL P L
Sbjct: 372 WAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRATFQEPLYPALRL 431
Query: 492 LEG 494
EG
Sbjct: 432 WEG 434
>gi|15208667 tripartite motif protein TRIM14 isoform alpha [Homo
sapiens]
Length = 442
Score = 103 bits (258), Expect = 3e-22
Identities = 113/423 (26%), Positives = 177/423 (41%), Gaps = 33/423 (7%)
Query: 94 RCPRHG-RPLELFCRTEGRCVCSVCTVRECR------LHERALLDAERLKREAQLRASLE 146
RCP HG R ELFCR RCVC++C V L A + ++L +E + L
Sbjct: 23 RCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGLALEAAVHVQKLSQECLKQ--LA 80
Query: 147 VTQQQATQAEGQLLELRKQSSQIQNSACILASWVSGKFSSLLQALEIQHTTALRSIEVAK 206
+ +QQ + ++ + +++ +A +W+ GKF+ L L+ + A + I+
Sbjct: 81 IKKQQHID---NITQIEDATEKLKANAESSKTWLKGKFTELRLLLDEEEALAKKFIDKNT 137
Query: 207 TQALAQARDEEQRLRVHLEAVARHGCRIRELLEQVDE----QTFLQESQLLQPPGPLGPL 262
L R++ R L+ + R+ + ++ D Q + Q +Q LG L
Sbjct: 138 QLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQAYTATEQEMQQQMSLGEL 197
Query: 263 ---TPLQWDEDQQLGDLKQLLSRLCGLLLEEGSHPGAPAKPVDLAPVEAPGPLAPVPSTV 319
PL ++ + K L+ + L + L+ + P + ++
Sbjct: 198 CHPVPLSFEPVKSF--FKGLVEAVESTLQTPLDIRLKESINCQLSDPSSTKPGTLLKTSP 255
Query: 320 CPLRRKLWQNYRNLTFDPVSANRHFYLSRQDQQVKHCRQ--SRGPGGPGSFE-LWQVQCA 376
P R L + R T DP + + LS D+ C S GP F+ LWQV
Sbjct: 256 SPERSLLLKYARTPTLDPDTMHARLRLSA-DRLTVRCGLLGSLGPVPVLRFDALWQVLAR 314
Query: 377 QSFQAGHHYWEVRASDHSVT--LGVSYPQLPRCRLGPHTDNIGRGPCSWGLCVQEDSLQA 434
F G HYWEV + +G +Y L R R +G SW C++ L+
Sbjct: 315 DCFATGRHYWEVDVQEAGAGWWVGAAYASLRR-RGASAAARLGCNRQSW--CLKRYDLEY 371
Query: 435 W--HNGEAQRL-PGVSGRLLGMDLDLASGCLTFYSLEPQTQPLYTFHALFNQPLTPVFWL 491
W H+G+ RL P LG+ LD +G L FY + L+TF A F +PL P L
Sbjct: 372 WAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRATFQEPLYPALRL 431
Query: 492 LEG 494
EG
Sbjct: 432 WEG 434
>gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens]
Length = 488
Score = 103 bits (256), Expect = 5e-22
Identities = 130/523 (24%), Positives = 218/523 (41%), Gaps = 98/523 (18%)
Query: 6 LEEKLTCAICLGLYQDPVTLPCGHNFCGACIRD------WWDRCGKACPECREPFPDGAE 59
+ E++TC ICL L +P+++ CGH+FC ACI ++CP C+ + G
Sbjct: 9 IREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPG-N 67
Query: 60 LRRNVALSGVLEVVRAGPARDPGPDPGPGPD-PAARCPRHGRPLELFCRTEGRCVCSVC- 117
LR N L+ ++ +R GPG A C HG L+LFC+ +G+ +C +C
Sbjct: 68 LRPNRHLANIVRRLREVVL-------GPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE 120
Query: 118 TVRECRLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACILA 177
+E R H L++ + + + + SL+ + + +AE +R++ + +N
Sbjct: 121 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER 180
Query: 178 SWVSGKFSSL-----------LQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEA 226
+ +F+ L L+ LE + LR IE A+ + Q Q LR +
Sbjct: 181 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQT----QSLRELISD 236
Query: 227 VARHGCR--IRELLEQVDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLC 284
+ R C+ ELL+ V + T E L+ P L P + + DLK++L R+C
Sbjct: 237 LERR-CQGSTMELLQDVSDVTERSEFWTLRKPEAL----PTKLRSMFRAPDLKRML-RVC 290
Query: 285 GLLLEEGSHPGAPAKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQNYRNLTFDPVSANRHF 344
L + S+ + ++T +P +AN +
Sbjct: 291 RELTDVQSY------------------------------------WVDVTLNPHTANLNL 314
Query: 345 YLSRQDQQVKHC-RQSRGPGGPGSFELWQVQCAQSFQAGHHYWEVRASDHSV-TLGVSYP 402
L++ +QV+ + GP V +Q F +G HYWEV + + LGV
Sbjct: 315 VLAKNRRQVRFVGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSN 374
Query: 403 QLPRCRLGP----------HTDNIGRGPCS--WGLCVQED-SLQAWHNGEAQRLPG--VS 447
LGP H+ P S W + +Q + +A+ + L V
Sbjct: 375 S-----LGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSMTVP 429
Query: 448 GRLLGMDLDLASGCLTFYSLEPQTQPLYTFHA-LFNQPLTPVF 489
R +G+ LD +G ++FY++ P+YTF F L P F
Sbjct: 430 PRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPYF 472
>gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens]
Length = 516
Score = 103 bits (256), Expect = 5e-22
Identities = 130/523 (24%), Positives = 218/523 (41%), Gaps = 98/523 (18%)
Query: 6 LEEKLTCAICLGLYQDPVTLPCGHNFCGACIRD------WWDRCGKACPECREPFPDGAE 59
+ E++TC ICL L +P+++ CGH+FC ACI ++CP C+ + G
Sbjct: 37 IREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPG-N 95
Query: 60 LRRNVALSGVLEVVRAGPARDPGPDPGPGPD-PAARCPRHGRPLELFCRTEGRCVCSVC- 117
LR N L+ ++ +R GPG A C HG L+LFC+ +G+ +C +C
Sbjct: 96 LRPNRHLANIVRRLREVVL-------GPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE 148
Query: 118 TVRECRLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACILA 177
+E R H L++ + + + + SL+ + + +AE +R++ + +N
Sbjct: 149 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER 208
Query: 178 SWVSGKFSSL-----------LQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEA 226
+ +F+ L L+ LE + LR IE A+ + Q Q LR +
Sbjct: 209 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQT----QSLRELISD 264
Query: 227 VARHGCR--IRELLEQVDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLC 284
+ R C+ ELL+ V + T E L+ P L P + + DLK++L R+C
Sbjct: 265 LERR-CQGSTMELLQDVSDVTERSEFWTLRKPEAL----PTKLRSMFRAPDLKRML-RVC 318
Query: 285 GLLLEEGSHPGAPAKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQNYRNLTFDPVSANRHF 344
L + S+ + ++T +P +AN +
Sbjct: 319 RELTDVQSY------------------------------------WVDVTLNPHTANLNL 342
Query: 345 YLSRQDQQVKHC-RQSRGPGGPGSFELWQVQCAQSFQAGHHYWEVRASDHSV-TLGVSYP 402
L++ +QV+ + GP V +Q F +G HYWEV + + LGV
Sbjct: 343 VLAKNRRQVRFVGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSN 402
Query: 403 QLPRCRLGP----------HTDNIGRGPCS--WGLCVQED-SLQAWHNGEAQRLPG--VS 447
LGP H+ P S W + +Q + +A+ + L V
Sbjct: 403 S-----LGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSMTVP 457
Query: 448 GRLLGMDLDLASGCLTFYSLEPQTQPLYTFHA-LFNQPLTPVF 489
R +G+ LD +G ++FY++ P+YTF F L P F
Sbjct: 458 PRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPYF 500
>gi|15208660 tripartite motif protein 21 [Homo sapiens]
Length = 475
Score = 101 bits (251), Expect = 2e-21
Identities = 128/499 (25%), Positives = 203/499 (40%), Gaps = 75/499 (15%)
Query: 5 LLEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGKACPECREPFPDGAELRRNV 64
++ E++TC ICL + +PV++ CGH+FC CI G CP CR+ F LR N
Sbjct: 9 MMWEEVTCPICLDPFVEPVSIECGHSFCQECISQVGKGGGSVCPVCRQRFL-LKNLRPNR 67
Query: 65 ALSGVLEVVR--AGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVCTVREC 122
L+ ++ ++ + AR+ RC HG L LFC +G+ +C VC +
Sbjct: 68 QLANMVNNLKEISQEARE--------GTQGERCAVHGERLHLFCEKDGKALCWVCA--QS 117
Query: 123 RLH-ERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACILASWVS 181
R H + A++ E E Q+ + + L ELR++
Sbjct: 118 RKHRDHAMVPLE------------EAAQEYQEKLQVALGELRRK---------------- 149
Query: 182 GKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARHGCRIRELLEQV 241
L + LE +E+A +A + E Q+ R+H E V + + E Q+
Sbjct: 150 ---QELAEKLE---------VEIAIKRADWKKTVETQKSRIHAEFVQQKNFLVEEEQRQL 197
Query: 242 DEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLCGL----LLEEGSHPGAP 297
E + QL LG + Q L +L L R C LL+E
Sbjct: 198 QELEKDEREQL----RILGEKEAKLAQQSQALQELISELDRRCHSSALELLQEVIIVLER 253
Query: 298 AKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQNYRNLTFDPVSANRHFYLSRQDQQVK-HC 356
++ +L ++ P V L++ L ++T DP +AN LS +QV+
Sbjct: 254 SESWNLKDLDITSPELRSVCHVPGLKKMLRTCAVHITLDPDTANPWLILSEDRRQVRLGD 313
Query: 357 RQSRGPGGPGSFELW-QVQCAQSFQAGHHYWEVRASDHSV-TLGVSYPQLPRCRLGPHTD 414
Q PG F+ + V AQ F +G HYWEV + LGV + R +
Sbjct: 314 TQQSIPGNEERFDSYPMVLGAQHFHSGKHYWEVDVTGKEAWDLGVCRDSVRRKGHFLLSS 373
Query: 415 NIGRGPCSWGLCVQEDSLQAWHNGEAQRLP---GVSGRLLGMDLDLASGCLTFYSLEPQT 471
G W + + + Q + G + P V +G+ LD +G ++FY++
Sbjct: 374 KSG----FWTIWLW--NKQKYEAGTYPQTPLHLQVPPCQVGIFLDYEAGMVSFYNITDHG 427
Query: 472 QPLYTF-HALFNQPLTPVF 489
+Y+F F PL P F
Sbjct: 428 SLIYSFSECAFTGPLRPFF 446
>gi|217035095 tripartite motif-containing 62 [Homo sapiens]
Length = 475
Score = 100 bits (250), Expect = 2e-21
Identities = 131/505 (25%), Positives = 205/505 (40%), Gaps = 77/505 (15%)
Query: 6 LEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDR----CGKACPECREPFPDGAELR 61
L+++L C+ICL +YQDPV+L C H FC CI + W R + CPECR F + A L
Sbjct: 5 LKDELLCSICLSIYQDPVSLGCEHYFCRRCITEHWVRQEAQGARDCPECRRTFAEPA-LA 63
Query: 62 RNVALSGVLEVVRAGPARDPGPDPGPGPDPAAR-CPRHGRPLELFCRTEGRCVCSVCTVR 120
++ L+ ++E + P D AAR C H + ++LFC T+ +C C
Sbjct: 64 PSLKLANIVERYSSFPL-----DAILNARRAARPCQAHDK-VKLFCLTDRALLCFFCD-- 115
Query: 121 ECRLHER----ALLDA-ERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACI 175
E LHE+ + DA + L+RE L+ L+ Q + L L++Q ++ ++S
Sbjct: 116 EPALHEQHQVTGIDDAFDELQRE--LKDQLQALQDSEREHTEALQLLKRQLAETKSSTKS 173
Query: 176 LASWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARHGCRIR 235
L + + F L + L + L +E + L + QR L V ++
Sbjct: 174 LRTTIGEAFERLHRLLRERQKAMLEELEADTARTLTDIEQKVQRYSQQLRKVQEGAQILQ 233
Query: 236 ELLEQVDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLCGLLLEEGSHPG 295
E L + D TF L + L RL G + E
Sbjct: 234 ERLAETDRHTF--------------------------LAGVASLSERLKGKIHETN---- 263
Query: 296 APAKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQNYR----NLTFDPVSANRHFYLSRQDQ 351
D + GPL + + L+Q+ LT DP +A++ LS
Sbjct: 264 --LTYEDFPTSKYTGPLQ------YTIWKSLFQDIHPVPAALTLDPGTAHQRLILSDDCT 315
Query: 352 QVKHCRQSRGP--GGPGSFEL-WQVQCAQSFQAGHHYWEVRASDHSV-TLGVSYPQLPRC 407
V + P P F++ V +++F +G HYWEV ++ + +G+++ R
Sbjct: 316 IVAYGNLHPQPLQDSPKRFDVEVSVLGSEAFSSGVHYWEVVVAEKTQWVIGLAHEAASR- 374
Query: 408 RLGPHTDNIGRGPCSWGLC-VQEDSLQAWHNGEAQRLPGVSGRL--LGMDLDLASGCLTF 464
+I P C V D Q E V +L +G+ LD G L F
Sbjct: 375 -----KGSIQIQPSRGFYCIVMHDGNQYSACTEPWTRLNVRDKLDKVGVFLDYDQGLLIF 429
Query: 465 YSLEPQTQPLYTFHALFNQPLTPVF 489
Y+ + + LYTF F L F
Sbjct: 430 YNADDMSW-LYTFREKFPGKLCSYF 453
>gi|16076875 tripartite motif-containing 7 isoform 4 [Homo sapiens]
Length = 221
Score = 100 bits (248), Expect = 4e-21
Identities = 62/184 (33%), Positives = 95/184 (51%), Gaps = 21/184 (11%)
Query: 6 LEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGKA--------------CPECR 51
L+ + TC+ICL L+++PV++ CGH+FC ACI W+R G CP+CR
Sbjct: 23 LQGEATCSICLELFREPVSVECGHSFCRACIGRCWERPGAGSVGAATRAPPFPLPCPQCR 82
Query: 52 EPFPDGAELRRNVALSGVLEVVR--AGPARDP---GPDPGPGPDPAARCPRHGRPLELFC 106
EP ++LR N L+ V ++R + PA P G AARC +HG P +L+C
Sbjct: 83 EP-ARPSQLRPNRQLAAVATLLRRFSLPAAAPGEHGSQAAAARAAAARCGQHGEPFKLYC 141
Query: 107 RTEGRCVCSVC-TVRECRLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQ 165
+ +GR +C VC RE R H LD + + L + L V +++ E +K+
Sbjct: 142 QDDGRAICVVCDRAREHREHAVLPLDEAVQEAKELLESRLRVLKKELEDCEVFRSTEKKE 201
Query: 166 SSQI 169
S ++
Sbjct: 202 SKEL 205
>gi|198442878 tripartite motif-containing 17 isoform 3 [Homo
sapiens]
Length = 343
Score = 98.6 bits (244), Expect = 1e-20
Identities = 86/271 (31%), Positives = 126/271 (46%), Gaps = 44/271 (16%)
Query: 3 AQLLEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRC-GK----------ACPECR 51
A+ L+E+ TC+ICL + DPV CGHNFC ACI+ W++ GK CPECR
Sbjct: 7 ARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECR 66
Query: 52 EPFPDGAELRRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGR 111
E P L N L+ V E+ + PG C H PL+LFC+ +
Sbjct: 67 EMSPQ-RNLLPNRLLTKVAEMAQ----------QHPGLQKQDLCQEHHEPLKLFCQKDQS 115
Query: 112 CVCSVC-TVRECRLHERALLDAERLKR--EAQLRASLEVTQQQATQAEGQLLELRKQSSQ 168
+C VC RE RLH +L AE + + +L +E ++Q T+ G L +QS
Sbjct: 116 PICVVCRESREHRLHR--VLPAEEAVQGYKLKLEEDMEYLREQITRT-GNLQAREEQS-- 170
Query: 169 IQNSACILASWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQ-----RLRVH 223
LA W GK + + ++ + V + Q L QA + E+ RLR
Sbjct: 171 -------LAEW-QGKVKERRERIVLEF-EKMNLYLVEEEQRLLQALETEEEETASRLRES 221
Query: 224 LEAVARHGCRIRELLEQVDEQTFLQESQLLQ 254
+ + R G + LL Q++E++ Q+LQ
Sbjct: 222 VACLDRQGHSLELLLLQLEERSTQGPLQMLQ 252
>gi|157426898 tripartite motif-containing 10 isoform 1 [Homo
sapiens]
Length = 481
Score = 97.1 bits (240), Expect = 4e-20
Identities = 129/515 (25%), Positives = 198/515 (38%), Gaps = 83/515 (16%)
Query: 6 LEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGK------ACPECREPFPDGAE 59
L +++ C IC G ++PVT+ CGHNFC AC+ + + G CP C+EPF G+
Sbjct: 10 LADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPFRPGS- 68
Query: 60 LRRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVCTV 119
R N L+ V+E + G G + C HG + FC + +C VC
Sbjct: 69 FRPNWQLANVVENIERLQLVST---LGLGEEDV--CQEHGEKIYFFCEDDEMQLCVVC-- 121
Query: 120 RECRLHE----RALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACI 175
RE H R L DA RE Q+ L+ +++ + + K+ +
Sbjct: 122 REAGEHATHTMRFLEDAAAPYRE-QIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVST 180
Query: 176 LASWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARHGCRIR 235
V +F+ L + LE Q + L +E L Q RDE L VA CR
Sbjct: 181 KRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQ-RDEFDLL------VAGEICRFS 233
Query: 236 ELLEQVDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLCGLLLEEGSHPG 295
L+E+++E+ +LL D++ L R
Sbjct: 234 ALIEELEEKNERPARELLT--------------------DIRSTLIRC---------ETR 264
Query: 296 APAKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQNYRNLTF-----------DPVSANRHF 344
KPV ++P E + P PL+R++ L F DP +++
Sbjct: 265 KCRKPVAVSP-ELGQRIRDFPQQALPLQREMKMFLEKLCFELDYEPAHISLDPQTSHPKL 323
Query: 345 YLSRQDQQVKHC-RQSRGPGGPGSFELWQVQCAQS-FQAGHHYWEVR---ASDHSVTLGV 399
LS Q+ + + P P F+ A + G H W V A S T+GV
Sbjct: 324 LLSEDHQRAQFSYKWQNSPDNPQRFDRATCVLAHTGITGGRHTWVVSIDLAHGGSCTVGV 383
Query: 400 SYPQLPR---CRLGPHTDNIGRGPCSWGLCVQEDSLQAWHNGEAQRLPGVSGRLLGMDLD 456
+ R RL P + + +WG S + Q R + + LD
Sbjct: 384 VSEDVQRKGELRLRPE-EGVWAVRLAWGFVSALGSFPTRLTLKEQP------RQVRVSLD 436
Query: 457 LASGCLTFYSLEPQTQPLYTFHALFNQPLTPVFWL 491
G +TF + + +P+YTF A F + + P F L
Sbjct: 437 YEVGWVTFTNAVTR-EPIYTFTASFTRKVIPFFGL 470
>gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens]
Length = 500
Score = 96.7 bits (239), Expect = 5e-20
Identities = 125/504 (24%), Positives = 201/504 (39%), Gaps = 84/504 (16%)
Query: 9 KLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGKA--CPECREPFPDGAELRRNVAL 66
+L C +C ++DP+ L CGHNFC ACI+D+W K CPEC+ N L
Sbjct: 38 ELHCPLCNDWFRDPLMLSCGHNFCEACIQDFWRLQAKETFCPECK-MLCQYNNCTFNPVL 96
Query: 67 SGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVCTVRECRLHE 126
++E ++ P P +CP HG L+LF + +G+ +C C +
Sbjct: 97 DKLVEKIKKLPLLKGHP----------QCPEHGENLKLFSKPDGKLICFQC--------K 138
Query: 127 RALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACILASWVSGKFSS 186
A L + K Q+ ++ ++ +GQL K+ ++N +
Sbjct: 139 DARLSVGQSKEFLQISDAVHFFTEELAIQQGQLETTLKELQTLRNMQKEAIAAHKENKLH 198
Query: 187 LLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARHGCRIRELLEQVDEQTF 246
L Q + ++ + + + L + R+E + L +E L Q+ EQ
Sbjct: 199 LQQHVSMEFLKLHQFLHSKEKDILTELREEGKALNEEMEL----------NLSQLQEQCL 248
Query: 247 LQESQLLQPPGPLGPLTPLQWDEDQQ-----LGDLKQLLSRLCGLLLEEGSHPGAPAKPV 301
L + L+ +Q +QQ L D+ LL LE+G A + +
Sbjct: 249 LAKDMLVS----------IQAKTEQQNSFDFLKDITTLLHS-----LEQGMKVLATRELI 293
Query: 302 D--LAPVEAPGPL-----APVPSTVCPLRRKLWQNYRNLTFDPVSANRHFYLSRQDQQVK 354
L + GP+ + T+CP LT DP +A+ + LS+ V
Sbjct: 294 SRKLNLGQYKGPIQYMVWREMQDTLCP-------GLSPLTLDPKTAHPNLVLSKSQTSVW 346
Query: 355 HCRQSR-GPGGPGSFE-LWQVQCAQSFQAGHHYWEVR-ASDHSVTLGVSYPQLPRCRLGP 411
H + P P F+ V ++ F +G YWEV A T+GV + R P
Sbjct: 347 HGDIKKIMPDDPERFDSSVAVLGSRGFTSGKWYWEVEVAKKTKWTVGVVRESIIRKGSCP 406
Query: 412 HTDNIGRGPCSWGLCVQEDSLQAWHNGEAQRLPGVSGRL------LGMDLDLASGCLTFY 465
T G W L ++ + + +A LP S L +G+ LD G L+FY
Sbjct: 407 LTPEQG----FWLLRLRNQT-----DLKALDLPSFSLTLTNNLDKVGIYLDYEGGQLSFY 457
Query: 466 SLEPQTQPLYTFHALFNQPLTPVF 489
+ + T +YTF F + L P F
Sbjct: 458 NAKTMTH-IYTFSNTFMEKLYPYF 480
>gi|37622899 ring finger protein 137 [Homo sapiens]
Length = 485
Score = 94.0 bits (232), Expect = 3e-19
Identities = 102/442 (23%), Positives = 173/442 (39%), Gaps = 92/442 (20%)
Query: 4 QLLEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWD------RCGKACPECREPFPDG 57
+ + E++ C IC+ ++P+++ CGH+FC +C+ W+ G CP CR P
Sbjct: 8 EAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPV-QP 66
Query: 58 AELRRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVC 117
LR N L+ V+E VR PG G C RHG L++FC+ + +C C
Sbjct: 67 RNLRPNWQLANVVEKVRLLRLH-----PGMGL-KGDLCERHGEKLKMFCKEDVLIMCEAC 120
Query: 118 TVR------------------ECRLHERALLDAERLKREAQLRASLEVTQQQATQAEGQL 159
+ + LHE E LK+E + LEV +++ T
Sbjct: 121 SQSPEHEAHSVVPMEDVAWEYKWELHEA----LEHLKKEQEEAWKLEVGERKRTATWKIQ 176
Query: 160 LELRKQSSQIQNSACILASWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQR 219
+E RKQS W K+ LL+ + H + A +A + Q+
Sbjct: 177 VETRKQS----------IVWEFEKYQRLLEKKQPPHRQLGAEVAAALASLQREAAETMQK 226
Query: 220 LRVHLEAVARHGCRIRELLEQVDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQL 279
L ++ + + + ++ ++ E++ P++W L D++++
Sbjct: 227 LELNHSELIQQSQVLWRMIAELKERS----------------QRPVRW----MLQDIQEV 266
Query: 280 LSRLCGLLLEEGSHPGAPAKPVDLAPVEAPGPLAPVPSTVC---PLRRKLWQNYRNLTFD 336
L+R L++ P P++ T C LR L ++ D
Sbjct: 267 LNRSKSWSLQQ------------------PEPISLELKTDCRVLGLREILKTYAADVRLD 308
Query: 337 PVSANRHFYLSRQDQQVKH-CRQSRGPGGPGSFELWQVQC-AQSFQAGHHYWEVRASDHS 394
P +A +S ++V + + P P F + + +Q +G HYWEV D S
Sbjct: 309 PDTAYSRLIVSEDRKRVHYGDTNQKLPDNPERFYRYNIVLGSQCISSGRHYWEVEVGDRS 368
Query: 395 V-TLGVSYPQLPR---CRLGPH 412
LGV + R L PH
Sbjct: 369 EWGLGVCKQNVDRKEVVYLSPH 390
>gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo
sapiens]
Length = 326
Score = 92.8 bits (229), Expect = 7e-19
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 23/256 (8%)
Query: 6 LEEKLTCAICLGLYQDPVTLPCGHNFCGACI-----RDWWDRCGKACPECREPF-PDGAE 59
++E++TC ICL L P++L CGH+FC AC+ + D+ +CP CR + P+
Sbjct: 9 VKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIR 68
Query: 60 LRRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVC-T 118
R+VA ++E +R P C RHG L LFC+ +G+ +C +C
Sbjct: 69 PNRHVA--NIVEKLREVKL-------SPEGQKVDHCARHGEKLLLFCQEDGKVICWLCER 119
Query: 119 VRECRLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACILAS 178
+E R H L + + + +L+A+LE+ +Q+ +AE ++R++ + + +
Sbjct: 120 SQEHRGHHTFLTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKT 179
Query: 179 WVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARHGCRIRELL 238
V F L L+ + + L+++E + L + E + ++ +REL+
Sbjct: 180 NVLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQS-------LRELI 232
Query: 239 EQVDEQTFLQESQLLQ 254
++ + +LLQ
Sbjct: 233 SDLEHRLQGSVMELLQ 248
>gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo
sapiens]
Length = 347
Score = 92.8 bits (229), Expect = 7e-19
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 23/256 (8%)
Query: 6 LEEKLTCAICLGLYQDPVTLPCGHNFCGACI-----RDWWDRCGKACPECREPF-PDGAE 59
++E++TC ICL L P++L CGH+FC AC+ + D+ +CP CR + P+
Sbjct: 9 VKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIR 68
Query: 60 LRRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVC-T 118
R+VA ++E +R P C RHG L LFC+ +G+ +C +C
Sbjct: 69 PNRHVA--NIVEKLREVKL-------SPEGQKVDHCARHGEKLLLFCQEDGKVICWLCER 119
Query: 119 VRECRLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACILAS 178
+E R H L + + + +L+A+LE+ +Q+ +AE ++R++ + + +
Sbjct: 120 SQEHRGHHTFLTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKT 179
Query: 179 WVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARHGCRIRELL 238
V F L L+ + + L+++E + L + E + ++ +REL+
Sbjct: 180 NVLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQS-------LRELI 232
Query: 239 EQVDEQTFLQESQLLQ 254
++ + +LLQ
Sbjct: 233 SDLEHRLQGSVMELLQ 248
>gi|68160935 tripartite motif-containing 17 isoform 2 [Homo sapiens]
Length = 450
Score = 92.0 bits (227), Expect = 1e-18
Identities = 134/494 (27%), Positives = 203/494 (41%), Gaps = 95/494 (19%)
Query: 27 CGHNFCGACIRDWWDRC-GK----------ACPECREPFPDGAELRRNVALSGVLEVVRA 75
CGHNFC ACI+ W++ GK CPECRE P L N L+ V E+ +
Sbjct: 4 CGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREMSPQ-RNLLPNRLLTKVAEMAQ- 61
Query: 76 GPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVC-TVRECRLHERALLDAER 134
PG C H PL+LFC+ + +C VC RE RLH +L AE
Sbjct: 62 ---------QHPGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRESREHRLHR--VLPAEE 110
Query: 135 LKR--EAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACILASWVSGKFSSLLQALE 192
+ + +L +E ++Q T+ G L +QS LA W GK + +
Sbjct: 111 AVQGYKLKLEEDMEYLREQITRT-GNLQAREEQS---------LAEW-QGKVKERRERIV 159
Query: 193 IQHTTALRSIEVAKTQALAQARDEEQ-----RLRVHLEAVARHGCRIRELLEQVDEQTFL 247
++ + V + Q L QA + E+ RLR + + R G + LL Q++E++
Sbjct: 160 LEF-EKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLEERS-- 216
Query: 248 QESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLCGLLLEEGSHPGAPAKPVDLAPVE 307
GPL Q L D+K+ LSR + ++ P ++AP
Sbjct: 217 -------TQGPL-----------QMLQDMKEPLSRKNNVSVQ------CP----EVAPPT 248
Query: 308 APGPLAPVPSTVCPLRRKLWQNYRNLTFDPVSANRH--FYLSRQDQQVKHCRQSRGPGGP 365
P + VP + LR L ++ D SA + Y SRQ + + + G
Sbjct: 249 RPRTVCRVPGQIEVLRGFL----EDVVPDATSAYPYLLLYESRQRRYLGSSPEGSGFCSK 304
Query: 366 GSFELWQVQCAQ-SFQAGHHYWEVR---ASDHSVTLGVSYPQLPRCRLGPHTDNIGRGPC 421
F + Q +F +G HYWEV D LGV + R D + + P
Sbjct: 305 DRFVAYPCAVGQTAFSSGRHYWEVGMNITGDALWALGVCRDNVSR------KDRVPKCPE 358
Query: 422 SWGLCVQEDSLQAWHNGEAQRLPGV---SGRLLGMDLDLASGCLTFYSLEPQTQPLYTF- 477
+ VQ + + + P + +G+ LD +G ++FYS+ + L+T+
Sbjct: 359 NGFWVVQLSKGTKYLSTFSALTPVMLMEPPSHMGIFLDFEAGEVSFYSVSDGSH-LHTYS 417
Query: 478 HALFNQPLTPVFWL 491
A F PL P F L
Sbjct: 418 QATFPGPLQPFFCL 431
>gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 91.3 bits (225), Expect = 2e-18
Identities = 127/531 (23%), Positives = 225/531 (42%), Gaps = 101/531 (19%)
Query: 1 MAAQLL---EEKLTCAICLGLYQDPVTLPCGHNFCGACI----RDWWDRCG--KACPECR 51
MA+++L +E++TC ICL L +P++L CGH+ C ACI ++ G +CP C
Sbjct: 1 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
Query: 52 EPFPDGAELRRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGR 111
+ L+ N L+ ++E ++ PD G D C HG L LFC+ + +
Sbjct: 61 ISY-SFEHLQANQHLANIVERLKEVKL---SPDNGKKRD---LCDHHGEKLLLFCKEDRK 113
Query: 112 CVCSVC-TVRECRLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQ 170
+C +C +E R H L + + + +L+A L+ +++ +AE ++R++ + +
Sbjct: 114 VICWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWK 173
Query: 171 NSACILASWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARH 230
+ +F L L + L+ +E + + L + + E L + V
Sbjct: 174 YQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLV--- 230
Query: 231 GCRIRELLEQVDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLCGLLLEE 290
REL+ V+ ++ +LLQ + ++W E +L K + +L +
Sbjct: 231 ----RELISDVECRSQWSTMELLQDMSGI-----MKWSEIWRLKKPKMVSKKLKTVF--- 278
Query: 291 GSHPGAPAKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQ---NYRNLTFDPVSANRHFYLS 347
AP S + + R+L + ++T + V+ N + LS
Sbjct: 279 ---------------------HAPDLSRMLQMFRELTAVRCYWVDVTLNSVNLNLNLVLS 317
Query: 348 RQDQQVKHCRQSRGPGGPGSFELWQVQC-------AQSFQAGHHYWEVRASDHSV-TLGV 399
+QV S +W QC +Q F +G HYWEV S + LGV
Sbjct: 318 EDQRQVI------------SVPIWPFQCYNYGVLGSQYFSSGKHYWEVDVSKKTAWILGV 365
Query: 400 ---SYPQ-----LPRC--RLGPHTDN--------IG-RGPCSWGLCVQEDSLQAWHNGEA 440
+Y + + RC R +T IG + C +G V E+SL + + E
Sbjct: 366 YCRTYSRHMKYVVRRCANRQNLYTKYRPLFGYWVIGLQNKCKYG--VFEESLSS--DPEV 421
Query: 441 QRLP-GVSGRLLGMDLDLASGCLTFYSLEPQTQPLYTF-HALFNQPLTPVF 489
L V +G+ LD +G ++F+++ +Y F F+QP+ P F
Sbjct: 422 LTLSMAVPPCRVGVFLDYEAGIVSFFNVTSHGSLIYKFSKCCFSQPVYPYF 472
>gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 91.3 bits (225), Expect = 2e-18
Identities = 127/531 (23%), Positives = 225/531 (42%), Gaps = 101/531 (19%)
Query: 1 MAAQLL---EEKLTCAICLGLYQDPVTLPCGHNFCGACI----RDWWDRCG--KACPECR 51
MA+++L +E++TC ICL L +P++L CGH+ C ACI ++ G +CP C
Sbjct: 1 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
Query: 52 EPFPDGAELRRNVALSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGR 111
+ L+ N L+ ++E ++ PD G D C HG L LFC+ + +
Sbjct: 61 ISY-SFEHLQANQHLANIVERLKEVKL---SPDNGKKRD---LCDHHGEKLLLFCKEDRK 113
Query: 112 CVCSVC-TVRECRLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQ 170
+C +C +E R H L + + + +L+A L+ +++ +AE ++R++ + +
Sbjct: 114 VICWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWK 173
Query: 171 NSACILASWVSGKFSSLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARH 230
+ +F L L + L+ +E + + L + + E L + V
Sbjct: 174 YQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLV--- 230
Query: 231 GCRIRELLEQVDEQTFLQESQLLQPPGPLGPLTPLQWDEDQQLGDLKQLLSRLCGLLLEE 290
REL+ V+ ++ +LLQ + ++W E +L K + +L +
Sbjct: 231 ----RELISDVECRSQWSTMELLQDMSGI-----MKWSEIWRLKKPKMVSKKLKTVF--- 278
Query: 291 GSHPGAPAKPVDLAPVEAPGPLAPVPSTVCPLRRKLWQ---NYRNLTFDPVSANRHFYLS 347
AP S + + R+L + ++T + V+ N + LS
Sbjct: 279 ---------------------HAPDLSRMLQMFRELTAVRCYWVDVTLNSVNLNLNLVLS 317
Query: 348 RQDQQVKHCRQSRGPGGPGSFELWQVQC-------AQSFQAGHHYWEVRASDHSV-TLGV 399
+QV S +W QC +Q F +G HYWEV S + LGV
Sbjct: 318 EDQRQVI------------SVPIWPFQCYNYGVLGSQYFSSGKHYWEVDVSKKTAWILGV 365
Query: 400 ---SYPQ-----LPRC--RLGPHTDN--------IG-RGPCSWGLCVQEDSLQAWHNGEA 440
+Y + + RC R +T IG + C +G V E+SL + + E
Sbjct: 366 YCRTYSRHMKYVVRRCANRQNLYTKYRPLFGYWVIGLQNKCKYG--VFEESLSS--DPEV 421
Query: 441 QRLP-GVSGRLLGMDLDLASGCLTFYSLEPQTQPLYTF-HALFNQPLTPVF 489
L V +G+ LD +G ++F+++ +Y F F+QP+ P F
Sbjct: 422 LTLSMAVPPCRVGVFLDYEAGIVSFFNVTSHGSLIYKFSKCCFSQPVYPYF 472
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,475,434
Number of Sequences: 37866
Number of extensions: 1434945
Number of successful extensions: 9198
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 292
Number of HSP's that attempted gapping in prelim test: 8030
Number of HSP's gapped (non-prelim): 1123
length of query: 517
length of database: 18,247,518
effective HSP length: 107
effective length of query: 410
effective length of database: 14,195,856
effective search space: 5820300960
effective search space used: 5820300960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.