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Search of human proteins with 38569482
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38569482 hypothetical protein LOC57535 [Homo sapiens]
(1013 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38569482 hypothetical protein LOC57535 [Homo sapiens] 2143 0.0
gi|218505750 hypothetical protein LOC222223 isoform 1 [Homo sapi... 1177 0.0
gi|33356136 hypothetical protein LOC222223 isoform 2 [Homo sapiens] 948 0.0
gi|148886654 polydom [Homo sapiens] 60 1e-08
gi|31377568 signal peptide, CUB domain, EGF-like 3 [Homo sapiens] 55 3e-07
gi|120587029 signal peptide, CUB domain, EGF-like 1 [Homo sapiens] 51 6e-06
gi|17975768 ephrin receptor EphB3 precursor [Homo sapiens] 47 7e-05
gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens] 44 8e-04
gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens] 44 8e-04
gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens] 44 8e-04
gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens] 44 8e-04
gi|10190748 CEGP1 protein [Homo sapiens] 44 0.001
gi|23312371 CD40 antigen isoform 2 precursor [Homo sapiens] 43 0.001
gi|4507581 CD40 antigen isoform 1 precursor [Homo sapiens] 42 0.002
gi|145312251 EPH receptor A6 isoform a [Homo sapiens] 42 0.003
gi|4505039 lymphotoxin beta receptor [Homo sapiens] 41 0.005
gi|239749596 PREDICTED: hypothetical protein XP_002347099 [Homo ... 40 0.009
gi|239743863 PREDICTED: hypothetical protein XP_002342982 [Homo ... 40 0.009
gi|55770892 ephrin receptor EphA8 isoform 2 precursor [Homo sapi... 40 0.009
gi|10140845 ephrin receptor EphA8 isoform 1 precursor [Homo sapi... 40 0.009
gi|14790170 tumor necrosis factor receptor superfamily, member 6... 40 0.011
gi|4507585 tumor necrosis factor receptor superfamily, member 6b... 40 0.011
gi|37577159 calcium-sensing receptor [Homo sapiens] 40 0.015
gi|32528301 EPH receptor B4 precursor [Homo sapiens] 40 0.015
gi|239755070 PREDICTED: similar to proprotein convertase subtili... 40 0.015
gi|221316650 ephrin receptor EphA1 [Homo sapiens] 39 0.019
gi|4507579 tumor necrosis factor receptor superfamily, member 4 ... 39 0.019
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s... 39 0.032
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa... 39 0.032
gi|187960042 selectin E precursor [Homo sapiens] 38 0.055
>gi|38569482 hypothetical protein LOC57535 [Homo sapiens]
Length = 1013
Score = 2143 bits (5553), Expect = 0.0
Identities = 1013/1013 (100%), Positives = 1013/1013 (100%)
Query: 1 MAEPGHSHHLSARVRGRTERRIPRLWRLLLWAGTAFQVTQGTGPELHACKESEYHYEYTA 60
MAEPGHSHHLSARVRGRTERRIPRLWRLLLWAGTAFQVTQGTGPELHACKESEYHYEYTA
Sbjct: 1 MAEPGHSHHLSARVRGRTERRIPRLWRLLLWAGTAFQVTQGTGPELHACKESEYHYEYTA 60
Query: 61 CDSTGSRWRVAVPHTPGLCTSLPDPVKGTECSFSCNAGEFLDMKDQSCKPCAEGRYSLGT 120
CDSTGSRWRVAVPHTPGLCTSLPDPVKGTECSFSCNAGEFLDMKDQSCKPCAEGRYSLGT
Sbjct: 61 CDSTGSRWRVAVPHTPGLCTSLPDPVKGTECSFSCNAGEFLDMKDQSCKPCAEGRYSLGT 120
Query: 121 GIRFDEWDELPHGFASLSANMELDDSAAESTGNCTSSKWVPRGDYIASNTDECTATLMYA 180
GIRFDEWDELPHGFASLSANMELDDSAAESTGNCTSSKWVPRGDYIASNTDECTATLMYA
Sbjct: 121 GIRFDEWDELPHGFASLSANMELDDSAAESTGNCTSSKWVPRGDYIASNTDECTATLMYA 180
Query: 181 VNLKQSGTVNFEYYYPDSSIIFEFFVQNDQCQPNADDSRWMKTTEKGWEFHSVELNRGNN 240
VNLKQSGTVNFEYYYPDSSIIFEFFVQNDQCQPNADDSRWMKTTEKGWEFHSVELNRGNN
Sbjct: 181 VNLKQSGTVNFEYYYPDSSIIFEFFVQNDQCQPNADDSRWMKTTEKGWEFHSVELNRGNN 240
Query: 241 VLYWRTTAFSVWTKVPKPVLVRNIAITGVAYTSECFPCKPGTYADKQGSSFCKLCPANSY 300
VLYWRTTAFSVWTKVPKPVLVRNIAITGVAYTSECFPCKPGTYADKQGSSFCKLCPANSY
Sbjct: 241 VLYWRTTAFSVWTKVPKPVLVRNIAITGVAYTSECFPCKPGTYADKQGSSFCKLCPANSY 300
Query: 301 SNKGETSCHQCDPDKYSEKGSSSCNVRPACTDKDYFYTHTACDANGETQLMYKWAKPKIC 360
SNKGETSCHQCDPDKYSEKGSSSCNVRPACTDKDYFYTHTACDANGETQLMYKWAKPKIC
Sbjct: 301 SNKGETSCHQCDPDKYSEKGSSSCNVRPACTDKDYFYTHTACDANGETQLMYKWAKPKIC 360
Query: 361 SEDLEGAVKLPASGVKTHCPPCNPGFFKTNNSTCQPCPYGSYSNGSDCTRCPAGTEPAVG 420
SEDLEGAVKLPASGVKTHCPPCNPGFFKTNNSTCQPCPYGSYSNGSDCTRCPAGTEPAVG
Sbjct: 361 SEDLEGAVKLPASGVKTHCPPCNPGFFKTNNSTCQPCPYGSYSNGSDCTRCPAGTEPAVG 420
Query: 421 FEYKWWNTLPTNMETTVLSGINFEYKGMTGWEVAGDHIYTAAGASDNDFMILTLVVPGFR 480
FEYKWWNTLPTNMETTVLSGINFEYKGMTGWEVAGDHIYTAAGASDNDFMILTLVVPGFR
Sbjct: 421 FEYKWWNTLPTNMETTVLSGINFEYKGMTGWEVAGDHIYTAAGASDNDFMILTLVVPGFR 480
Query: 481 PPQSVMADTENKEVARITFVFETLCSVNCELYFMVGVNSRTNTPVETWKGSKGKQSYTYI 540
PPQSVMADTENKEVARITFVFETLCSVNCELYFMVGVNSRTNTPVETWKGSKGKQSYTYI
Sbjct: 481 PPQSVMADTENKEVARITFVFETLCSVNCELYFMVGVNSRTNTPVETWKGSKGKQSYTYI 540
Query: 541 IEENTTTSFTWAFQRTTFHEASRKYTNDVAKIYSINVTNVMNGVASYCRPCALEASDVGS 600
IEENTTTSFTWAFQRTTFHEASRKYTNDVAKIYSINVTNVMNGVASYCRPCALEASDVGS
Sbjct: 541 IEENTTTSFTWAFQRTTFHEASRKYTNDVAKIYSINVTNVMNGVASYCRPCALEASDVGS 600
Query: 601 SCTSCPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACVPCGPGTKNNKIHSLCYNDCTF 660
SCTSCPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACVPCGPGTKNNKIHSLCYNDCTF
Sbjct: 601 SCTSCPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACVPCGPGTKNNKIHSLCYNDCTF 660
Query: 661 SRNTPTRTFNYNFSALANTVTLAGGPSFTSKGLKYFHHFTLSLCGNQGRKMSVCTDNVTD 720
SRNTPTRTFNYNFSALANTVTLAGGPSFTSKGLKYFHHFTLSLCGNQGRKMSVCTDNVTD
Sbjct: 661 SRNTPTRTFNYNFSALANTVTLAGGPSFTSKGLKYFHHFTLSLCGNQGRKMSVCTDNVTD 720
Query: 721 LRIPEGESGFSKSITAYVCQAVIIPPEVTGYKAGVSSQPVSLADRLIGVTTDMTLDGITS 780
LRIPEGESGFSKSITAYVCQAVIIPPEVTGYKAGVSSQPVSLADRLIGVTTDMTLDGITS
Sbjct: 721 LRIPEGESGFSKSITAYVCQAVIIPPEVTGYKAGVSSQPVSLADRLIGVTTDMTLDGITS 780
Query: 781 PAELFHLESLGIPDVIFFYRSNDVTQSCSSGRSTTIRVRCSPQKTVPGSLLLPGTCSDGT 840
PAELFHLESLGIPDVIFFYRSNDVTQSCSSGRSTTIRVRCSPQKTVPGSLLLPGTCSDGT
Sbjct: 781 PAELFHLESLGIPDVIFFYRSNDVTQSCSSGRSTTIRVRCSPQKTVPGSLLLPGTCSDGT 840
Query: 841 CDGCNFHFLWESAAACPLCSVADYHAIVSSCVAGIQKTTYVWREPKLCSGGISLPEQRVT 900
CDGCNFHFLWESAAACPLCSVADYHAIVSSCVAGIQKTTYVWREPKLCSGGISLPEQRVT
Sbjct: 841 CDGCNFHFLWESAAACPLCSVADYHAIVSSCVAGIQKTTYVWREPKLCSGGISLPEQRVT 900
Query: 901 ICKTIDFWLKVGISAGTCTAILLTVLTCYFWKKNQKLEYKYSKLVMNATLKDCDLPAADS 960
ICKTIDFWLKVGISAGTCTAILLTVLTCYFWKKNQKLEYKYSKLVMNATLKDCDLPAADS
Sbjct: 901 ICKTIDFWLKVGISAGTCTAILLTVLTCYFWKKNQKLEYKYSKLVMNATLKDCDLPAADS 960
Query: 961 CAIMEGEDVEDDLIFTSKKSLFGKIKSFTSKRTPDGFDSVPLKTSSGGLDMDL 1013
CAIMEGEDVEDDLIFTSKKSLFGKIKSFTSKRTPDGFDSVPLKTSSGGLDMDL
Sbjct: 961 CAIMEGEDVEDDLIFTSKKSLFGKIKSFTSKRTPDGFDSVPLKTSSGGLDMDL 1013
>gi|218505750 hypothetical protein LOC222223 isoform 1 [Homo sapiens]
Length = 1029
Score = 1177 bits (3045), Expect = 0.0
Identities = 537/983 (54%), Positives = 711/983 (72%), Gaps = 12/983 (1%)
Query: 31 WAGTAFQVTQGTGPELHACKESEYHYEYTACDSTGSRWRVAVPHTPGLCTSLPDPVKGTE 90
WAG + + L C+E +YH+EYT CDS+GSRWRVA+P++ C+ LPDPV+G E
Sbjct: 46 WAG---DLPSSSSRPLPPCQEKDYHFEYTECDSSGSRWRVAIPNSAVDCSGLPDPVRGKE 102
Query: 91 CSFSCNAGEFLDMKDQSCKPCAEGRYSLGTGIRFDEWDELPHGFASLSANMELDDSAAES 150
C+FSC +GE+L+MK+Q C C EG YSLG+GI+FDEWDELP GF++++ M+ ++S
Sbjct: 103 CTFSCASGEYLEMKNQVCSKCGEGTYSLGSGIKFDEWDELPAGFSNIATFMDTVVGPSDS 162
Query: 151 TGN-CTSSKWVPRGDYIASNTDECTATLMYAVNLKQSGTVNFEYYYPDSSIIFEFFVQND 209
+ C +S W+PRG+YI SN D+CT +L+YAV+LK+SG V FEY Y D++I FEFF+QND
Sbjct: 163 RPDGCNNSSWIPRGNYIESNRDDCTVSLIYAVHLKKSGYVFFEYQYVDNNIFFEFFIQND 222
Query: 210 QCQP-NADDSRWMKTTEKG-WEFHSVELNRGNNVLYWRTTAFSVWTKVPKPVLVRNIAIT 267
QCQ + +W+K T+ G W HSV L G N+LYWRTT + +K KPVLV+NI I
Sbjct: 223 QCQEMDTTTDKWVKLTDNGEWGSHSVMLKSGTNILYWRTTGILMGSKAVKPVLVKNITIE 282
Query: 268 GVAYTSECFPCKPGTYADKQGSSFCKLCPANSYSNKGETSCHQC-DPDKYSEKGSSSCNV 326
GVAYTSECFPCKPGT+++K GS C++CP N+YS KG C +C D ++SE+GSS C
Sbjct: 283 GVAYTSECFPCKPGTFSNKPGSFNCQVCPRNTYSEKGAKECIRCKDDSQFSEEGSSECTE 342
Query: 327 RPACTDKDYFYTHTACDANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPPCNPGF 386
RP CT KDYF HT CD G+TQ+MYKW +PKIC EDL A++LP SG K CPPCNPGF
Sbjct: 343 RPPCTTKDYFQIHTPCDEEGKTQIMYKWIEPKICREDLTDAIRLPPSGEKKDCPPCNPGF 402
Query: 387 FKTNNSTCQPCPYGSYSNGS-DCTRCPAGTEPAVGFEYKWWNTLPTNMETTVLSGINFEY 445
+ +S+C PCP G++S+G+ +C CPAGTEPA+GFEYKWWN LP NM+T+ + N +
Sbjct: 403 YNNGSSSCHPCPPGTFSDGTKECRPCPAGTEPALGFEYKWWNVLPGNMKTSCFNVGNSKC 462
Query: 446 KGMTGWEVAGDHIYTAAGASDNDFMILTLVVPGFRPPQSVMADTENKEVARITFVFETLC 505
GM GWEVAGDHI + AG SDND++IL L +PGF+PP S+ T E+ RITFVFETLC
Sbjct: 463 DGMNGWEVAGDHIQSGAGGSDNDYLILNLHIPGFKPPTSMTGAT-GSELGRITFVFETLC 521
Query: 506 SVNCELYFMVGVNSRTNTPVETWKGSKGKQSYTYIIEENTTTSFTWAFQRTTFHEASRKY 565
S +C LYFMV +N ++ VE+W G+K KQ+YT+II +N T +FTWAFQRT + +R++
Sbjct: 522 SADCVLYFMVDINRKSTNVVESWGGTKEKQAYTHIIFKNATFTFTWAFQRTNQGQDNRRF 581
Query: 566 TNDVAKIYSINVTNVMNGVASYCRPCALEASDVGSSCTSCPAGYYIDRDSGTCHSCPTNT 625
ND+ KIYSI TN ++GVAS CR CAL + GSSC CP G+YI++++ C CP +T
Sbjct: 582 INDMVKIYSITATNAVDGVASSCRACALGSEQSGSSCVPCPPGHYIEKETNQCKECPPDT 641
Query: 626 ILKAHQPYGVQACVPCGPGTKNNKIHSLCYNDCTFSRNTPTRTFNYNFSALANTVTLAGG 685
L HQ YG +AC+PCGPG+KNN+ HS+CY+DC F ++ +Y+FS L++ +L G
Sbjct: 642 YLSIHQVYGKEACIPCGPGSKNNQDHSVCYSDCFFYHEKENQSLHYDFSNLSSVGSLMNG 701
Query: 686 PSFTSKGLKYFHHFTLSLCGNQGRKMSVCTDNVTDLRIPE---GESGFSKSITAYVCQAV 742
PSFTSKG KYFH F +SLCG++G+KM++CT+N+TD + E G ++ + A+VCQ+
Sbjct: 702 PSFTSKGTKYFHFFNISLCGHEGKKMALCTNNITDFTVKEIVAGSDDYTNLVGAFVCQST 761
Query: 743 IIPPEVTGYKAGVSSQPVSLADRLIGVTTDMTLDGITSPAELFHLESLGIPDVIFFYRSN 802
IIP E G++A +SSQ + LAD IGVT + TL I ++F + + IPDV FFY+S+
Sbjct: 762 IIPSESKGFRAALSSQSIILADTFIGVTVETTLKNINIKEDMFPVPTSQIPDVHFFYKSS 821
Query: 803 DVTQSCSSGRSTTIRVRCSPQKTVPGSLLLPGTCSDGTCDGCNFHFLWESAAACPLCSVA 862
T SC +GRST +++RC+P K+ G + +P C GTCDGC F+FLWESA ACPLC+
Sbjct: 822 TATTSCINGRSTAVKMRCNPTKSGAGVISVPSKCPAGTCDGCTFYFLWESAEACPLCTEH 881
Query: 863 DYHAIVSSCVAGIQKTTYVWREPKLCSGGISLPEQRVTICKTIDFWLKVGISAGTCTAIL 922
D+H I +C G Q+T YVW EPK C GISLPE+++ C+T+DFWLKVG G TA+L
Sbjct: 882 DFHEIEGACKRGFQETLYVWNEPKWCIKGISLPEKKLATCETVDFWLKVGAGVGAFTAVL 941
Query: 923 LTVLTCYFWKKNQKLEYKYSKLVMNATLKDCDLPAADSCAIMEGEDVEDDLIFTSKKSLF 982
L LTCYFWKKNQKLEYKYSKLVM K+C+LPAADSCAIMEGED E+++++++K+SL
Sbjct: 942 LVALTCYFWKKNQKLEYKYSKLVMTTNSKECELPAADSCAIMEGEDNEEEVVYSNKQSLL 1001
Query: 983 GKIKSFTSKRTPDGFDSVPLKTS 1005
GK+KS +K D F+SV LKTS
Sbjct: 1002 GKLKSLATKEKEDHFESVQLKTS 1024
>gi|33356136 hypothetical protein LOC222223 isoform 2 [Homo sapiens]
Length = 789
Score = 948 bits (2451), Expect = 0.0
Identities = 430/780 (55%), Positives = 564/780 (72%), Gaps = 6/780 (0%)
Query: 231 HSVELNRGNNVLYWRTTAFSVWTKVPKPVLVRNIAITGVAYTSECFPCKPGTYADKQGSS 290
+ V L G N+LYWRTT + +K KPVLV+NI I GVAYTSECFPCKPGT+++K GS
Sbjct: 6 YQVMLKSGTNILYWRTTGILMGSKAVKPVLVKNITIEGVAYTSECFPCKPGTFSNKPGSF 65
Query: 291 FCKLCPANSYSNKGETSCHQC-DPDKYSEKGSSSCNVRPACTDKDYFYTHTACDANGETQ 349
C++CP N+YS KG C +C D ++SE+GSS C RP CT KDYF HT CD G+TQ
Sbjct: 66 NCQVCPRNTYSEKGAKECIRCKDDSQFSEEGSSECTERPPCTTKDYFQIHTPCDEEGKTQ 125
Query: 350 LMYKWAKPKICSEDLEGAVKLPASGVKTHCPPCNPGFFKTNNSTCQPCPYGSYSNGS-DC 408
+MYKW +PKIC EDL A++LP SG K CPPCNPGF+ +S+C PCP G++S+G+ +C
Sbjct: 126 IMYKWIEPKICREDLTDAIRLPPSGEKKDCPPCNPGFYNNGSSSCHPCPPGTFSDGTKEC 185
Query: 409 TRCPAGTEPAVGFEYKWWNTLPTNMETTVLSGINFEYKGMTGWEVAGDHIYTAAGASDND 468
CPAGTEPA+GFEYKWWN LP NM+T+ + N + GM GWEVAGDHI + AG SDND
Sbjct: 186 RPCPAGTEPALGFEYKWWNVLPGNMKTSCFNVGNSKCDGMNGWEVAGDHIQSGAGGSDND 245
Query: 469 FMILTLVVPGFRPPQSVMADTENKEVARITFVFETLCSVNCELYFMVGVNSRTNTPVETW 528
++IL L +PGF+PP S+ T E+ RITFVFETLCS +C LYFMV +N ++ VE+W
Sbjct: 246 YLILNLHIPGFKPPTSMTGAT-GSELGRITFVFETLCSADCVLYFMVDINRKSTNVVESW 304
Query: 529 KGSKGKQSYTYIIEENTTTSFTWAFQRTTFHEASRKYTNDVAKIYSINVTNVMNGVASYC 588
G+K KQ+YT+II +N T +FTWAFQRT + +R++ ND+ KIYSI TN ++GVAS C
Sbjct: 305 GGTKEKQAYTHIIFKNATFTFTWAFQRTNQGQDNRRFINDMVKIYSITATNAVDGVASSC 364
Query: 589 RPCALEASDVGSSCTSCPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACVPCGPGTKNN 648
R CAL + GSSC CP G+YI++++ C CP +T L HQ YG +AC+PCGPG+KNN
Sbjct: 365 RACALGSEQSGSSCVPCPPGHYIEKETNQCKECPPDTYLSIHQVYGKEACIPCGPGSKNN 424
Query: 649 KIHSLCYNDCTFSRNTPTRTFNYNFSALANTVTLAGGPSFTSKGLKYFHHFTLSLCGNQG 708
+ HS+CY+DC F ++ +Y+FS L++ +L GPSFTSKG KYFH F +SLCG++G
Sbjct: 425 QDHSVCYSDCFFYHEKENQSLHYDFSNLSSVGSLMNGPSFTSKGTKYFHFFNISLCGHEG 484
Query: 709 RKMSVCTDNVTDLRIPE---GESGFSKSITAYVCQAVIIPPEVTGYKAGVSSQPVSLADR 765
+KM++CT+N+TD + E G ++ + A+VCQ+ IIP E G++A +SSQ + LAD
Sbjct: 485 KKMALCTNNITDFTVKEIVAGSDDYTNLVGAFVCQSTIIPSESKGFRAALSSQSIILADT 544
Query: 766 LIGVTTDMTLDGITSPAELFHLESLGIPDVIFFYRSNDVTQSCSSGRSTTIRVRCSPQKT 825
IGVT + TL I ++F + + IPDV FFY+S+ T SC +GRST +++RC+P K+
Sbjct: 545 FIGVTVETTLKNINIKEDMFPVPTSQIPDVHFFYKSSTATTSCINGRSTAVKMRCNPTKS 604
Query: 826 VPGSLLLPGTCSDGTCDGCNFHFLWESAAACPLCSVADYHAIVSSCVAGIQKTTYVWREP 885
G + +P C GTCDGC F+FLWESA ACPLC+ D+H I +C G Q+T YVW EP
Sbjct: 605 GAGVISVPSKCPAGTCDGCTFYFLWESAEACPLCTEHDFHEIEGACKRGFQETLYVWNEP 664
Query: 886 KLCSGGISLPEQRVTICKTIDFWLKVGISAGTCTAILLTVLTCYFWKKNQKLEYKYSKLV 945
K C GISLPE+++ C+T+DFWLKVG G TA+LL LTCYFWKKNQKLEYKYSKLV
Sbjct: 665 KWCIKGISLPEKKLATCETVDFWLKVGAGVGAFTAVLLVALTCYFWKKNQKLEYKYSKLV 724
Query: 946 MNATLKDCDLPAADSCAIMEGEDVEDDLIFTSKKSLFGKIKSFTSKRTPDGFDSVPLKTS 1005
M K+C+LPAADSCAIMEGED E+++++++K+SL GK+KS +K D F+SV LKTS
Sbjct: 725 MTTNSKECELPAADSCAIMEGEDNEEEVVYSNKQSLLGKLKSLATKEKEDHFESVQLKTS 784
Score = 52.0 bits (123), Expect = 3e-06
Identities = 74/339 (21%), Positives = 111/339 (32%), Gaps = 77/339 (22%)
Query: 49 CKESEYHYEYTACDSTGSRWRVAVPHTPGLCTS-------LPDPVKGTECSFSCNAGEFL 101
C +Y +T CD G + P +C LP + +C CN G F
Sbjct: 106 CTTKDYFQIHTPCDEEGKTQIMYKWIEPKICREDLTDAIRLPPSGEKKDCP-PCNPG-FY 163
Query: 102 DMKDQSCKPCAEGRYSLGT--------------GIRFDEWDELPHGFASLSANMELDDSA 147
+ SC PC G +S GT G + W+ LP + N+
Sbjct: 164 NNGSSSCHPCPPGTFSDGTKECRPCPAGTEPALGFEYKWWNVLPGNMKTSCFNV------ 217
Query: 148 AESTGNCTS-SKWVPRGDYIASNTDEC---------------TATLMYAVNLKQSGTVNF 191
C + W GD+I S T M + G + F
Sbjct: 218 --GNSKCDGMNGWEVAGDHIQSGAGGSDNDYLILNLHIPGFKPPTSMTGATGSELGRITF 275
Query: 192 EY-YYPDSSIIFEFFVQNDQCQPNADDSRWMKTTEK---------------GWEFHSVEL 235
+ + + F V ++ N +S W T EK W F
Sbjct: 276 VFETLCSADCVLYFMVDINRKSTNVVES-WGGTKEKQAYTHIIFKNATFTFTWAFQRTNQ 334
Query: 236 NRGNN------VLYWRTTAFSVWTKVPKPVLVRNIAITGVAYTSECFPCKPGTYADKQGS 289
+ N V + TA + V R A+ S C PC PG Y +K+ +
Sbjct: 335 GQDNRRFINDMVKIYSITATNAVDGVASS--CRACALGSEQSGSSCVPCPPGHYIEKE-T 391
Query: 290 SFCKLCPANSYSN----KGETSCHQCDPDKYSEKGSSSC 324
+ CK CP ++Y + G+ +C C P + + S C
Sbjct: 392 NQCKECPPDTYLSIHQVYGKEACIPCGPGSKNNQDHSVC 430
>gi|148886654 polydom [Homo sapiens]
Length = 3571
Score = 59.7 bits (143), Expect = 1e-08
Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 27/156 (17%)
Query: 275 CFPCKPGTYADKQGSSFCKLCPANSYS----NKGETSCH-QCDPDKYSEKGSSSCNVRPA 329
C C+ G+Y D++G CKLCP+ Y+ ++ + C QC YS G +C P
Sbjct: 1015 CESCRIGSYQDEEGQLECKLCPSGMYTEYIHSRNISDCKAQCKQGTYSYSGLETCESCPL 1074
Query: 330 CTDKDYFYTHTACDANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPPCNPG-FFK 388
T + F + + P+ S GAV + A GV PC G F +
Sbjct: 1075 GTYQPKFGSRSCLSC------------PENTSTVKRGAVNISACGV-----PCPEGKFSR 1117
Query: 389 TNNSTCQPCPYGSYSNGSD---CTRCP-AGTEPAVG 420
+ C PCP Y + C CP GT P G
Sbjct: 1118 SGLMPCHPCPRDYYQPNAGKAFCLACPFYGTTPFAG 1153
Score = 37.7 bits (86), Expect = 0.055
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Query: 587 YCRPCALEASDVGSSCTSCPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACVPCGPGTK 646
+CRP ++ G C +CP G Y + + TC SC I G C C G
Sbjct: 987 FCRPGSVLR---GRMCVNCPLGTYYNLEHFTCESC---RIGSYQDEEGQLECKLCPSGMY 1040
Query: 647 NNKIHSLCYNDC 658
IHS +DC
Sbjct: 1041 TEYIHSRNISDC 1052
Score = 35.4 bits (80), Expect = 0.27
Identities = 16/54 (29%), Positives = 22/54 (40%)
Query: 605 CPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACVPCGPGTKNNKIHSLCYNDC 658
C GYY C +CP+ T P G+ +C+PC + S DC
Sbjct: 307 CEKGYYGKGLQYECTACPSGTYKPEGSPGGISSCIPCPDENHTSPPGSTSPEDC 360
Score = 35.4 bits (80), Expect = 0.27
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 601 SCTSCPAGYYIDR-DSGTCHSCPTNTILKAHQPYGVQAC-VPCGPG 644
+C SCP G Y + S +C SCP NT + AC VPC G
Sbjct: 1068 TCESCPLGTYQPKFGSRSCLSCPENTSTVKRGAVNISACGVPCPEG 1113
>gi|31377568 signal peptide, CUB domain, EGF-like 3 [Homo sapiens]
Length = 993
Score = 55.5 bits (132), Expect = 3e-07
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 22/152 (14%)
Query: 272 TSECFPCKPGTYADKQGSSFCKLCP-ANSYSNKGETS----CHQCDPDKYSEKGSSSCNV 326
T +C PC GT+ +++G C LCP ++++ G T+ QC P ++S G C
Sbjct: 649 TEQCVPCPAGTFQEREGQLSCDLCPGSDAHGPLGATNVTTCAGQCPPGQHSVDGFKPCQP 708
Query: 327 RPACTDKDYFYTHTACDANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPPCNPGF 386
P T + G + EGA+ K C P + +
Sbjct: 709 CPRGTYQPEAGRTLCFPCGGGLTTKH------------EGAISFQDCDTKVQCSPGH--Y 754
Query: 387 FKTNNSTCQPCPYGSYS---NGSDCTRCPAGT 415
+ T+ C C GSY + C+RCP T
Sbjct: 755 YNTSIHRCIRCAMGSYQPDFRQNFCSRCPGNT 786
Score = 34.3 bits (77), Expect = 0.61
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 593 LEASDVGSSCTSCPAGYYIDRDSGTCHSCPTNTILKAHQPY-GVQACVPCGPGTKNNKIH 651
L A++V + CP G + C CP T +QP G C PCG G
Sbjct: 681 LGATNVTTCAGQCPPGQHSVDGFKPCQPCPRGT----YQPEAGRTLCFPCGGGLTTKHEG 736
Query: 652 SLCYNDC 658
++ + DC
Sbjct: 737 AISFQDC 743
Score = 32.0 bits (71), Expect = 3.0
Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Query: 588 CRPCALEASDVGSSCTSCPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQAC 638
CRP A G+ C SCP G Y + C CP T + C
Sbjct: 625 CRPGQHRA---GTKCVSCPQGTYYHGQTEQCVPCPAGTFQEREGQLSCDLC 672
>gi|120587029 signal peptide, CUB domain, EGF-like 1 [Homo sapiens]
Length = 988
Score = 50.8 bits (120), Expect = 6e-06
Identities = 40/150 (26%), Positives = 52/150 (34%), Gaps = 22/150 (14%)
Query: 274 ECFPCKPGTYADKQGSSFCKLCPANS----YSNKGETSC-HQCDPDKYSEKGSSSCNVRP 328
+C C PGTY D +G C CP++ + + C QC P +S G C P
Sbjct: 645 QCVSCMPGTYQDMEGQLSCTPCPSSDGLGLPGARNVSECGGQCSPGFFSADGFKPCQACP 704
Query: 329 ACTDKDYFYTHTACDANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPPCNPGFFK 388
T + T C G L EG K HC P + +
Sbjct: 705 VGTYQPE-PGRTGCFPCGGGLLTKH-----------EGTTSFQDCEAKVHCSPGH--HYN 750
Query: 389 TNNSTCQPCPYGSYS---NGSDCTRCPAGT 415
T C CP G+Y + C CP T
Sbjct: 751 TTTHRCIRCPVGTYQPEFGQNHCITCPGNT 780
Score = 32.3 bits (72), Expect = 2.3
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 8/70 (11%)
Query: 590 PCALEASDVGSSCTSCPAGYYIDRDSGTCHSCPTNTILKAHQPY-GVQACVPCGPGTKNN 648
P A S+ G C+ G++ C +CP T +QP G C PCG G
Sbjct: 675 PGARNVSECGGQCSP---GFFSADGFKPCQACPVGT----YQPEPGRTGCFPCGGGLLTK 727
Query: 649 KIHSLCYNDC 658
+ + DC
Sbjct: 728 HEGTTSFQDC 737
Score = 31.6 bits (70), Expect = 4.0
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 272 TSECFPCKPGTYADKQGSSFCKLCPANSYSN-KGETSCHQC 311
T C C GTY + G + C CP N+ ++ G T+ C
Sbjct: 753 THRCIRCPVGTYQPEFGQNHCITCPGNTSTDFDGSTNVTHC 793
>gi|17975768 ephrin receptor EphB3 precursor [Homo sapiens]
Length = 998
Score = 47.4 bits (111), Expect = 7e-05
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 270 AYTSECFPCKPGTYADKQGSSFCKLCPANSYSNKGETSCHQCDPDKY---SEKGSSSCNV 326
A S+C PC PG+Y KQG C CP NS + S C + Y S+ S+C
Sbjct: 279 AKESQCRPCPPGSYKAKQGEGPCLPCPPNSRTTSPAASICTCHNNFYRADSDSADSACTT 338
Query: 327 RPACTDKDYFYTHTACDANGETQLMYKWAKPK 358
P+ ET L+ +W++P+
Sbjct: 339 VPS-------PPRGVISNVNETSLILEWSEPR 363
>gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens]
Length = 3333
Score = 43.9 bits (102), Expect = 8e-04
Identities = 39/143 (27%), Positives = 52/143 (36%), Gaps = 29/143 (20%)
Query: 271 YTSECFPCKPGTYADK--QGSSFCKLCPANSYSNKGETSCHQCDPDKYSEKGSSSCNVRP 328
YT C PC ++++ GS C C N+ GE C +C Y SC P
Sbjct: 1680 YTGRCVPCNCNGHSNQCQDGSGICVNCQHNT---AGE-HCERCQEGYYGNAVHGSCRACP 1735
Query: 329 ACTDKDYFYTHTACDANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPPCNPGFF- 387
C + F T C NG D+ + K +G T C C PG+F
Sbjct: 1736 -CPHTNSFAT--GCVVNGG---------------DVRCSCKAGYTG--TQCERCAPGYFG 1775
Query: 388 --KTNNSTCQPCPYGSYSNGSDC 408
+ +CQPC S C
Sbjct: 1776 NPQKFGGSCQPCSCNSNGQLGSC 1798
Score = 32.0 bits (71), Expect = 3.0
Identities = 22/79 (27%), Positives = 27/79 (34%), Gaps = 16/79 (20%)
Query: 591 CALEASDVGSSCTSCPAGYYIDRD---SGTCHSCPTN------------TILKAHQPYGV 635
CA + G SC C GYY D +G C C N + H G
Sbjct: 1654 CACPPAYAGDSCQGCSPGYYRDHKGLYTGRCVPCNCNGHSNQCQDGSGICVNCQHNTAG- 1712
Query: 636 QACVPCGPGTKNNKIHSLC 654
+ C C G N +H C
Sbjct: 1713 EHCERCQEGYYGNAVHGSC 1731
>gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens]
Length = 1668
Score = 43.9 bits (102), Expect = 8e-04
Identities = 39/143 (27%), Positives = 52/143 (36%), Gaps = 29/143 (20%)
Query: 271 YTSECFPCKPGTYADK--QGSSFCKLCPANSYSNKGETSCHQCDPDKYSEKGSSSCNVRP 328
YT C PC ++++ GS C C N+ GE C +C Y SC P
Sbjct: 71 YTGRCVPCNCNGHSNQCQDGSGICVNCQHNT---AGE-HCERCQEGYYGNAVHGSCRACP 126
Query: 329 ACTDKDYFYTHTACDANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPPCNPGFF- 387
C + F T C NG D+ + K +G T C C PG+F
Sbjct: 127 -CPHTNSFAT--GCVVNGG---------------DVRCSCKAGYTG--TQCERCAPGYFG 166
Query: 388 --KTNNSTCQPCPYGSYSNGSDC 408
+ +CQPC S C
Sbjct: 167 NPQKFGGSCQPCSCNSNGQLGSC 189
>gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens]
Length = 3277
Score = 43.9 bits (102), Expect = 8e-04
Identities = 39/143 (27%), Positives = 52/143 (36%), Gaps = 29/143 (20%)
Query: 271 YTSECFPCKPGTYADK--QGSSFCKLCPANSYSNKGETSCHQCDPDKYSEKGSSSCNVRP 328
YT C PC ++++ GS C C N+ GE C +C Y SC P
Sbjct: 1680 YTGRCVPCNCNGHSNQCQDGSGICVNCQHNT---AGE-HCERCQEGYYGNAVHGSCRACP 1735
Query: 329 ACTDKDYFYTHTACDANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPPCNPGFF- 387
C + F T C NG D+ + K +G T C C PG+F
Sbjct: 1736 -CPHTNSFAT--GCVVNGG---------------DVRCSCKAGYTG--TQCERCAPGYFG 1775
Query: 388 --KTNNSTCQPCPYGSYSNGSDC 408
+ +CQPC S C
Sbjct: 1776 NPQKFGGSCQPCSCNSNGQLGSC 1798
Score = 32.0 bits (71), Expect = 3.0
Identities = 22/79 (27%), Positives = 27/79 (34%), Gaps = 16/79 (20%)
Query: 591 CALEASDVGSSCTSCPAGYYIDRD---SGTCHSCPTN------------TILKAHQPYGV 635
CA + G SC C GYY D +G C C N + H G
Sbjct: 1654 CACPPAYAGDSCQGCSPGYYRDHKGLYTGRCVPCNCNGHSNQCQDGSGICVNCQHNTAG- 1712
Query: 636 QACVPCGPGTKNNKIHSLC 654
+ C C G N +H C
Sbjct: 1713 EHCERCQEGYYGNAVHGSC 1731
>gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens]
Length = 1724
Score = 43.9 bits (102), Expect = 8e-04
Identities = 39/143 (27%), Positives = 52/143 (36%), Gaps = 29/143 (20%)
Query: 271 YTSECFPCKPGTYADK--QGSSFCKLCPANSYSNKGETSCHQCDPDKYSEKGSSSCNVRP 328
YT C PC ++++ GS C C N+ GE C +C Y SC P
Sbjct: 71 YTGRCVPCNCNGHSNQCQDGSGICVNCQHNT---AGE-HCERCQEGYYGNAVHGSCRACP 126
Query: 329 ACTDKDYFYTHTACDANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPPCNPGFF- 387
C + F T C NG D+ + K +G T C C PG+F
Sbjct: 127 -CPHTNSFAT--GCVVNGG---------------DVRCSCKAGYTG--TQCERCAPGYFG 166
Query: 388 --KTNNSTCQPCPYGSYSNGSDC 408
+ +CQPC S C
Sbjct: 167 NPQKFGGSCQPCSCNSNGQLGSC 189
>gi|10190748 CEGP1 protein [Homo sapiens]
Length = 999
Score = 43.5 bits (101), Expect = 0.001
Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 27/153 (17%)
Query: 275 CFPCKPGTYADKQGSSFCKLC--PANSYSNKGETSCHQ------CDPDKYSEKGSSSCNV 326
C C GT+ +++G C+ C P NS + K + + C P +YS G + C +
Sbjct: 654 CILCPNGTFQNEEGQMTCEPCPRPGNSGALKTPEAWNMSECGGLCQPGEYSADGFAPCQL 713
Query: 327 RPACTDKDYFYTHTACDANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPPCNPG- 385
T + + G ++ A +D E V+ C+PG
Sbjct: 714 CALGTFQPEAGRTSCFPCGGGLATKHQGA---TSFQDCETRVQ------------CSPGH 758
Query: 386 FFKTNNSTCQPCPYGSYS---NGSDCTRCPAGT 415
F+ T C CP G+Y ++C CP T
Sbjct: 759 FYNTTTHRCIRCPVGTYQPEFGKNNCVSCPGNT 791
Score = 32.7 bits (73), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 272 TSECFPCKPGTYADKQGSSFCKLCPANSYSN-KGETSCHQC 311
T C C GTY + G + C CP N+ ++ G T+ QC
Sbjct: 764 THRCIRCPVGTYQPEFGKNNCVSCPGNTTTDFDGSTNITQC 804
Score = 32.3 bits (72), Expect = 2.3
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Query: 591 CALEASDVGSSCTSCPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACVPC 641
C + + C SC AG Y D C CP T G C PC
Sbjct: 627 CGVGQGHAENQCVSCRAGTYYDGARERCILCPNGTF---QNEEGQMTCEPC 674
>gi|23312371 CD40 antigen isoform 2 precursor [Homo sapiens]
Length = 203
Score = 43.1 bits (100), Expect = 0.001
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 25/145 (17%)
Query: 275 CFPCKPGTYADKQGSSF----CKLCPANSYSN--KGETSCHQ---CDPD---KYSEKGSS 322
C C+PG + F C C + + + ET CHQ CDP+ + +KG+S
Sbjct: 38 CSLCQPGQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTS 97
Query: 323 SCNVRPACTDKDYFYTHTACDANGETQLMYKWAKPKICSEDLEGAVKLPASGVK-THCPP 381
+ C ++ + T AC E+ ++++ P VK A+GV T C P
Sbjct: 98 ETDTICTC-EEGWHCTSEAC----ESCVLHRSCSPGF-------GVKQIATGVSDTICEP 145
Query: 382 CNPGFFKTNNSTCQPCPYGSYSNGS 406
C GFF +S + C + S GS
Sbjct: 146 CPVGFFSNVSSAFEKCHPWTRSPGS 170
>gi|4507581 CD40 antigen isoform 1 precursor [Homo sapiens]
Length = 277
Score = 42.4 bits (98), Expect = 0.002
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 25/154 (16%)
Query: 275 CFPCKPGTYADKQGSSF----CKLCPANSYSN--KGETSCHQ---CDPD---KYSEKGSS 322
C C+PG + F C C + + + ET CHQ CDP+ + +KG+S
Sbjct: 38 CSLCQPGQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTS 97
Query: 323 SCNVRPACTDKDYFYTHTACDANGETQLMYKWAKPKICSEDLEGAVKLPASGVK-THCPP 381
+ C ++ + T AC E+ ++++ P VK A+GV T C P
Sbjct: 98 ETDTICTC-EEGWHCTSEAC----ESCVLHRSCSPGF-------GVKQIATGVSDTICEP 145
Query: 382 CNPGFFKTNNSTCQPCPYGSYSNGSDCTRCPAGT 415
C GFF +S + C + D AGT
Sbjct: 146 CPVGFFSNVSSAFEKCHPWTSCETKDLVVQQAGT 179
>gi|145312251 EPH receptor A6 isoform a [Homo sapiens]
Length = 1130
Score = 42.0 bits (97), Expect = 0.003
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 9/115 (7%)
Query: 275 CFPCKPGTYADKQGSSFCKLCPANSYSNKGETSCHQCDPDKY-SEKGSSSCNVRPACTDK 333
C C+PG Y G++ C CP +S + TS QC+ + +EK S ACT
Sbjct: 370 CHACRPGFYKAFAGNTKCSKCPPHSLTYMEATSVCQCEKGYFRAEKDPPSM----ACTRP 425
Query: 334 DYFYTHTACDANGETQLMYKWAKPKICS--EDLEGAVKLPASGVKT-HCPPCNPG 385
+ + N ET L+ +W+ P +DL +V G+ T C C G
Sbjct: 426 PSAPRNVVFNIN-ETALILEWSPPSDTGGRKDLTYSVICKKCGLDTSQCEDCGGG 479
Score = 31.2 bits (69), Expect = 5.2
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 27/83 (32%)
Query: 342 CDANGETQLMYKWAKPK---ICS---EDLEGAVKLPASGVKTHCPPCNPGFFK--TNNST 393
C A+G+ W P ICS E++EG+ C C PGF+K N+
Sbjct: 344 CGADGD------WLVPLGRCICSTGYEEIEGS-----------CHACRPGFYKAFAGNTK 386
Query: 394 CQPCPYGS--YSNGSDCTRCPAG 414
C CP S Y + +C G
Sbjct: 387 CSKCPPHSLTYMEATSVCQCEKG 409
>gi|4505039 lymphotoxin beta receptor [Homo sapiens]
Length = 435
Score = 41.2 bits (95), Expect = 0.005
Identities = 35/141 (24%), Positives = 46/141 (32%), Gaps = 31/141 (21%)
Query: 275 CFPCKPGTYADKQGS----SFCKLCPANSYSNKGE-----TSCHQCDPDKYSE------- 318
C C PGTY + S + C C NSY+ C CDP E
Sbjct: 59 CSRCPPGTYVSAKCSRIRDTVCATCAENSYNEHWNYLTICQLCRPCDPVMGLEEIAPCTS 118
Query: 319 KGSSSCNVRPACTDKDYFYTHTACDANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTH 378
K + C +P + T C+ + C E +K H
Sbjct: 119 KRKTQCRCQPGMFCAAWALECTHCELLSD------------CPPGTEAELKDEVGKGNNH 166
Query: 379 CPPCNPGFFKTNNS---TCQP 396
C PC G F+ +S CQP
Sbjct: 167 CVPCKAGHFQNTSSPSARCQP 187
>gi|239749596 PREDICTED: hypothetical protein XP_002347099 [Homo
sapiens]
Length = 853
Score = 40.4 bits (93), Expect = 0.009
Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 14/126 (11%)
Query: 287 QGSSFCKLCPANSYSNKGETSCHQCD-PDKYSEKGSSSCNVRPACTDKDYFYTHTACDAN 345
+G + K CP SY+ G C +C P + E +++C+ +C + + H C N
Sbjct: 252 EGRCYSK-CPEGSYAEDG--ICERCSSPCRTCEGNATNCH---SC-EGGHVLHHGVCQEN 304
Query: 346 GETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPPCNPGFFKTNNSTCQPCPYGSYSNG 405
+ + K C E + + + C C P FF ++ Q CP G Y++
Sbjct: 305 CPERHVAVKGVCKHCPEMCQDCIH------EKTCKECTPEFFLHDDMCHQSCPRGFYADS 358
Query: 406 SDCTRC 411
C C
Sbjct: 359 RHCVPC 364
Score = 36.6 bits (83), Expect = 0.12
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 581 MNGVASYCRPCALEASDVGSSCTS-CPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACV 639
M C+ C + + + ++C CP GYY D DS C C ++ + + + C
Sbjct: 472 MGPAEDQCQTCPMNSLLLNTTCVKDCPEGYYADEDSNRCAHC--HSSCRTCEGRHSRQCH 529
Query: 640 PCGPG 644
C PG
Sbjct: 530 SCRPG 534
Score = 33.9 bits (76), Expect = 0.80
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 582 NGVASYCRPCALEASDVGSSC-TSCPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACVP 640
NG A+ C C A + +C +SCP G + SG+C +C + + G C
Sbjct: 184 NGSATLCTSCPKGAYLLAQACVSSCPQGTWPSVRSGSCENCTEACAICS----GADLCKK 239
Query: 641 C--GPGTKNNKIHSLCYNDC 658
C PG CY+ C
Sbjct: 240 CQMQPGHPLFLHEGRCYSKC 259
Score = 33.5 bits (75), Expect = 1.0
Identities = 36/157 (22%), Positives = 51/157 (32%), Gaps = 24/157 (15%)
Query: 270 AYTSECFPC-KPGTYADKQGSSFCKLCPANSYSNKGETSCHQCDPDKYSEKGSSSC-NVR 327
A + C PC K + C+LC +S+ +C Y EK + C +
Sbjct: 356 ADSRHCVPCHKDCLECSGPKADDCELCLESSWVLYDGLCLEECPAGTYYEKETKECRDCH 415
Query: 328 PACTDKDYFYTHTAC------DANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPP 381
+C T T C + G K + + ED G C P
Sbjct: 416 KSCLTCSSSGTCTTCQKGLIMNPRGSCMANEKCSPSEYWDEDAPG------------CKP 463
Query: 382 CNPGFFK---TNNSTCQPCPYGSYSNGSDCTR-CPAG 414
C+ F CQ CP S + C + CP G
Sbjct: 464 CHVKCFHCMGPAEDQCQTCPMNSLLLNTTCVKDCPEG 500
>gi|239743863 PREDICTED: hypothetical protein XP_002342982 [Homo
sapiens]
Length = 853
Score = 40.4 bits (93), Expect = 0.009
Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 14/126 (11%)
Query: 287 QGSSFCKLCPANSYSNKGETSCHQCD-PDKYSEKGSSSCNVRPACTDKDYFYTHTACDAN 345
+G + K CP SY+ G C +C P + E +++C+ +C + + H C N
Sbjct: 252 EGRCYSK-CPEGSYAEDG--ICERCSSPCRTCEGNATNCH---SC-EGGHVLHHGVCQEN 304
Query: 346 GETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPPCNPGFFKTNNSTCQPCPYGSYSNG 405
+ + K C E + + + C C P FF ++ Q CP G Y++
Sbjct: 305 CPERHVAVKGVCKHCPEMCQDCIH------EKTCKECTPEFFLHDDMCHQSCPRGFYADS 358
Query: 406 SDCTRC 411
C C
Sbjct: 359 RHCVPC 364
Score = 36.6 bits (83), Expect = 0.12
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 581 MNGVASYCRPCALEASDVGSSCTS-CPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACV 639
M C+ C + + + ++C CP GYY D DS C C ++ + + + C
Sbjct: 472 MGPAEDQCQTCPMNSLLLNTTCVKDCPEGYYADEDSNRCAHC--HSSCRTCEGRHSRQCH 529
Query: 640 PCGPG 644
C PG
Sbjct: 530 SCRPG 534
Score = 33.9 bits (76), Expect = 0.80
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 582 NGVASYCRPCALEASDVGSSC-TSCPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACVP 640
NG A+ C C A + +C +SCP G + SG+C +C + + G C
Sbjct: 184 NGSATLCTSCPKGAYLLAQACVSSCPQGTWPSVRSGSCENCTEACAICS----GADLCKK 239
Query: 641 C--GPGTKNNKIHSLCYNDC 658
C PG CY+ C
Sbjct: 240 CQMQPGHPLFLHEGRCYSKC 259
Score = 33.5 bits (75), Expect = 1.0
Identities = 36/157 (22%), Positives = 51/157 (32%), Gaps = 24/157 (15%)
Query: 270 AYTSECFPC-KPGTYADKQGSSFCKLCPANSYSNKGETSCHQCDPDKYSEKGSSSC-NVR 327
A + C PC K + C+LC +S+ +C Y EK + C +
Sbjct: 356 ADSRHCVPCHKDCLECSGPKADDCELCLESSWVLYDGLCLEECPAGTYYEKETKECRDCH 415
Query: 328 PACTDKDYFYTHTAC------DANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPP 381
+C T T C + G K + + ED G C P
Sbjct: 416 KSCLTCSSSGTCTTCQKGLIMNPRGSCMANEKCSPSEYWDEDAPG------------CKP 463
Query: 382 CNPGFFK---TNNSTCQPCPYGSYSNGSDCTR-CPAG 414
C+ F CQ CP S + C + CP G
Sbjct: 464 CHVKCFHCMGPAEDQCQTCPMNSLLLNTTCVKDCPEG 500
>gi|55770892 ephrin receptor EphA8 isoform 2 precursor [Homo
sapiens]
Length = 495
Score = 40.4 bits (93), Expect = 0.009
Identities = 36/146 (24%), Positives = 50/146 (34%), Gaps = 40/146 (27%)
Query: 275 CFPCKPGTYADKQGSSFCKLCPANSYSNKGETSCHQCDPDKYS---EKGSSSCNVRPACT 331
C C+ G Y G C CP +S+S CD Y + SS+C P+
Sbjct: 273 CVACELGFYKSAPGDQLCARCPPHSHSAAPAAQACHCDLSYYRAALDPPSSACTRPPSAP 332
Query: 332 DKDYFYTHTACDANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPPCNPGFFK--T 389
+ NG T + +WA PP +PG T
Sbjct: 333 ------VNLISSVNG-TSVTLEWA------------------------PPLDPGGRSDIT 361
Query: 390 NNSTCQPCPYGSYSNGSDCTRCPAGT 415
N+ C+ CP+ S C C +GT
Sbjct: 362 YNAVCRRCPWAL----SRCEACGSGT 383
>gi|10140845 ephrin receptor EphA8 isoform 1 precursor [Homo
sapiens]
Length = 1005
Score = 40.4 bits (93), Expect = 0.009
Identities = 36/146 (24%), Positives = 50/146 (34%), Gaps = 40/146 (27%)
Query: 275 CFPCKPGTYADKQGSSFCKLCPANSYSNKGETSCHQCDPDKYS---EKGSSSCNVRPACT 331
C C+ G Y G C CP +S+S CD Y + SS+C P+
Sbjct: 273 CVACELGFYKSAPGDQLCARCPPHSHSAAPAAQACHCDLSYYRAALDPPSSACTRPPSAP 332
Query: 332 DKDYFYTHTACDANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPPCNPGFFK--T 389
+ NG T + +WA PP +PG T
Sbjct: 333 ------VNLISSVNG-TSVTLEWA------------------------PPLDPGGRSDIT 361
Query: 390 NNSTCQPCPYGSYSNGSDCTRCPAGT 415
N+ C+ CP+ S C C +GT
Sbjct: 362 YNAVCRRCPWAL----SRCEACGSGT 383
>gi|14790170 tumor necrosis factor receptor superfamily, member 6b
[Homo sapiens]
Length = 300
Score = 40.0 bits (92), Expect = 0.011
Identities = 49/189 (25%), Positives = 72/189 (38%), Gaps = 46/189 (24%)
Query: 258 PVLVRNIAITGVAYTSECFPCKPGTYADKQGSSFCKLCPANSYSNK-----GETSCHQCD 312
P L+ A+ GVA T P P A+ C CP ++ + T+C C
Sbjct: 19 PALLPVPAVRGVAET----PTYPWRDAETGERLVCAQCPPGTFVQRPCRRDSPTTCGPCP 74
Query: 313 PDKYSE-----KGSSSCNVRPACTDKDYFYTHTACDANGETQLMYK---WAKPKICSEDL 364
P Y++ + CNV C +++ AC A + +A C L
Sbjct: 75 PRHYTQFWNYLERCRYCNV--LCGEREE--EARACHATHNRACRCRTGFFAHAGFC---L 127
Query: 365 EGAVKLPASGV--------KTHCPPCNPGFFKTNNSTCQPC-PY-------------GSY 402
E A P +GV T C PC PG F ++S+ + C P+ GS
Sbjct: 128 EHASCPPGAGVIAPGTPSQNTQCQPCPPGTFSASSSSSEQCQPHRNCTALGLALNVPGSS 187
Query: 403 SNGSDCTRC 411
S+ + CT C
Sbjct: 188 SHDTLCTSC 196
>gi|4507585 tumor necrosis factor receptor superfamily, member 6b
[Homo sapiens]
Length = 300
Score = 40.0 bits (92), Expect = 0.011
Identities = 49/189 (25%), Positives = 72/189 (38%), Gaps = 46/189 (24%)
Query: 258 PVLVRNIAITGVAYTSECFPCKPGTYADKQGSSFCKLCPANSYSNK-----GETSCHQCD 312
P L+ A+ GVA T P P A+ C CP ++ + T+C C
Sbjct: 19 PALLPVPAVRGVAET----PTYPWRDAETGERLVCAQCPPGTFVQRPCRRDSPTTCGPCP 74
Query: 313 PDKYSE-----KGSSSCNVRPACTDKDYFYTHTACDANGETQLMYK---WAKPKICSEDL 364
P Y++ + CNV C +++ AC A + +A C L
Sbjct: 75 PRHYTQFWNYLERCRYCNV--LCGEREE--EARACHATHNRACRCRTGFFAHAGFC---L 127
Query: 365 EGAVKLPASGV--------KTHCPPCNPGFFKTNNSTCQPC-PY-------------GSY 402
E A P +GV T C PC PG F ++S+ + C P+ GS
Sbjct: 128 EHASCPPGAGVIAPGTPSQNTQCQPCPPGTFSASSSSSEQCQPHRNCTALGLALNVPGSS 187
Query: 403 SNGSDCTRC 411
S+ + CT C
Sbjct: 188 SHDTLCTSC 196
>gi|37577159 calcium-sensing receptor [Homo sapiens]
Length = 1078
Score = 39.7 bits (91), Expect = 0.015
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 274 ECFPCKPGTYADKQGSSFCKLCPANSYSNKGETSC 308
EC C G Y+D+ +S C CP + +SN+ TSC
Sbjct: 564 ECVECPDGEYSDETDASACNKCPDDFWSNENHTSC 598
>gi|32528301 EPH receptor B4 precursor [Homo sapiens]
Length = 987
Score = 39.7 bits (91), Expect = 0.015
Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 27/130 (20%)
Query: 273 SECFPCKPGTYADKQGSSFCKLCPANSYSNKGETSCHQCDPDKY---SEKGSSSCNVRPA 329
++C C GT+ G C+ CPANS+SN ++ QC + ++ + C P+
Sbjct: 266 TKCRACAQGTFKPLSGEGSCQPCPANSHSNTIGSAVCQCRVGYFRARTDPRGAPCTTPPS 325
Query: 330 CTDKDYFYTHTACDANGETQLMYKWAKPKICS--EDLEGAVKLPASGVKTHCPPCNPGFF 387
NG + L +W+ P EDL A++ C C PG
Sbjct: 326 AP------RSVVSRLNG-SSLHLEWSAPLESGGREDLTYALR---------CRECRPG-- 367
Query: 388 KTNNSTCQPC 397
+C PC
Sbjct: 368 ----GSCAPC 373
Score = 34.7 bits (78), Expect = 0.47
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 377 THCPPCNPGFFK--TNNSTCQPCPYGSYSN--GSDCTRCPAG 414
T C C G FK + +CQPCP S+SN GS +C G
Sbjct: 266 TKCRACAQGTFKPLSGEGSCQPCPANSHSNTIGSAVCQCRVG 307
>gi|239755070 PREDICTED: similar to proprotein convertase
subtilisin/kexin type 5 [Homo sapiens]
Length = 853
Score = 39.7 bits (91), Expect = 0.015
Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 14/126 (11%)
Query: 287 QGSSFCKLCPANSYSNKGETSCHQCD-PDKYSEKGSSSCNVRPACTDKDYFYTHTACDAN 345
+G + K CP SY+ G C +C P + E +++C+ +C + + H C N
Sbjct: 252 EGRCYSK-CPEGSYAEDG--ICERCSSPCRTCEGNATNCH---SC-EGGHVLHHGVCQEN 304
Query: 346 GETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPPCNPGFFKTNNSTCQPCPYGSYSNG 405
+ + K C E + + + C C P FF ++ Q CP G Y++
Sbjct: 305 CPERHVAVEGVCKHCPEMCQDCIH------EKTCKECMPEFFLHDDMCHQSCPRGFYADS 358
Query: 406 SDCTRC 411
C C
Sbjct: 359 HHCVPC 364
Score = 36.6 bits (83), Expect = 0.12
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 581 MNGVASYCRPCALEASDVGSSCTS-CPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACV 639
M C+ C + + + ++C CP GYY D DS C C ++ + + + C
Sbjct: 472 MGPAEDQCQTCPMNSLLLNTTCVKDCPEGYYADEDSNRCAHC--HSSCRTCEGRHSRQCH 529
Query: 640 PCGPG 644
C PG
Sbjct: 530 SCRPG 534
Score = 33.9 bits (76), Expect = 0.80
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 582 NGVASYCRPCALEASDVGSSC-TSCPAGYYIDRDSGTCHSCPTNTILKAHQPYGVQACVP 640
NG A+ C C A + +C +SCP G + SG+C +C + + G C
Sbjct: 184 NGSATLCTSCPKGAYLLAQACVSSCPQGTWPSVRSGSCENCTEACAICS----GADLCKK 239
Query: 641 C--GPGTKNNKIHSLCYNDC 658
C PG CY+ C
Sbjct: 240 CQMQPGHPLFLHEGRCYSKC 259
Score = 33.5 bits (75), Expect = 1.0
Identities = 36/157 (22%), Positives = 51/157 (32%), Gaps = 24/157 (15%)
Query: 270 AYTSECFPC-KPGTYADKQGSSFCKLCPANSYSNKGETSCHQCDPDKYSEKGSSSC-NVR 327
A + C PC K + C+LC +S+ +C Y EK + C +
Sbjct: 356 ADSHHCVPCHKDCLECSGPKADDCELCLESSWVLYDGLCLEECPAGTYYEKQTKECRDCH 415
Query: 328 PACTDKDYFYTHTAC------DANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPP 381
+C T T C + G K + + ED G C P
Sbjct: 416 KSCLTCSSSGTCTTCQKGLIMNPRGSCMANEKCSPSEYWDEDAPG------------CKP 463
Query: 382 CNPGFFK---TNNSTCQPCPYGSYSNGSDCTR-CPAG 414
C+ F CQ CP S + C + CP G
Sbjct: 464 CHVKCFHCMGPAEDQCQTCPMNSLLLNTTCVKDCPEG 500
>gi|221316650 ephrin receptor EphA1 [Homo sapiens]
Length = 976
Score = 39.3 bits (90), Expect = 0.019
Identities = 49/198 (24%), Positives = 73/198 (36%), Gaps = 29/198 (14%)
Query: 275 CFPCKPGTYADKQGSSFCKLCPANSYS-NKGETSCHQCDPDKYSEKGSSSCNVRPACTDK 333
C C G+Y + C CP S + ++G T C C+ Y G + ACT
Sbjct: 277 CVACPSGSYRMDMDTPHCLTCPQQSTAESEGATIC-TCESGHYRAPGEGP---QVACTGP 332
Query: 334 DYFYTHTACDANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCPPCNPGFFKTNNST 393
+ + A+G TQL +W P D G + S C C +
Sbjct: 333 PSAPRNLSFSASG-TQLSLRWEPP----ADTGGRQDVRYS---VRCSQCQG--TAQDGGP 382
Query: 394 CQPCPYG-SYSNGSDCTRCPA----GTEPAVGFEYKWWNTLPTNMET-TVLSGINFEYKG 447
CQPC G +S G+ PA G EP + + N+E +SG+
Sbjct: 383 CQPCGVGVHFSPGARGLTTPAVHVNGLEPYANYTF--------NVEAQNGVSGLGSSGHA 434
Query: 448 MTGWEVAGDHIYTAAGAS 465
T ++ H + +G S
Sbjct: 435 STSVSISMGHAESLSGLS 452
Score = 32.0 bits (71), Expect = 3.0
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 587 YCRPCALEASDVGSSCTSCPAG-YYIDRDSGTCHSCP 622
+C P E G +C +CP+G Y +D D+ C +CP
Sbjct: 263 HCEP-GYEEGGSGEACVACPSGSYRMDMDTPHCLTCP 298
>gi|4507579 tumor necrosis factor receptor superfamily, member 4
precursor [Homo sapiens]
Length = 277
Score = 39.3 bits (90), Expect = 0.019
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 13/65 (20%)
Query: 366 GAVKLPASGVKTHCPPCNPGFFK--TNNSTCQPCPYGSYSNGSD----CT-------RCP 412
G V + T C PC PGF+ ++ C+PC + + +GS+ CT RC
Sbjct: 51 GMVSRCSRSQNTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCR 110
Query: 413 AGTEP 417
AGT+P
Sbjct: 111 AGTQP 115
Score = 30.4 bits (67), Expect = 8.8
Identities = 45/182 (24%), Positives = 57/182 (31%), Gaps = 56/182 (30%)
Query: 261 VRNIAITGVAYTSE---CFPCKPGTYADKQGSSFCKLCPANSYSNKGETSCHQCDPDKYS 317
V + G Y S C C+PG + C S T C C P Y+
Sbjct: 26 VTGLHCVGDTYPSNDRCCHECRPG-------NGMVSRC-----SRSQNTVCRPCGPGFYN 73
Query: 318 EKGSSS-------CNVRPACTDKDYFYT--HTACDANGETQLMYKWAKPKICSEDLEGAV 368
+ SS CN+R K T C TQ + + KP +
Sbjct: 74 DVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDSY-KPGV--------- 123
Query: 369 KLPASGVKTHCPPCNPGFFKT-NNSTCQP---CPYGS------YSNGSDC---TRCPAGT 415
C PC PG F +N C+P C SN SD R P T
Sbjct: 124 ---------DCAPCPPGHFSPGDNQACKPWTNCTLAGKHTLQPASNSSDAICEDRDPPAT 174
Query: 416 EP 417
+P
Sbjct: 175 QP 176
>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
sapiens]
Length = 3118
Score = 38.5 bits (88), Expect = 0.032
Identities = 33/154 (21%), Positives = 55/154 (35%), Gaps = 22/154 (14%)
Query: 272 TSECFPCKPGTYADKQGSSFCKLCPANSYSNKGETSCHQCDP-----DKYSEKGSSSCNV 326
T EC CK D G +C C Y + + C P + S S +C++
Sbjct: 770 TGECLNCK-----DHTGGPYCDKCLPGFYGEPTKGTSEDCQPCACPLNIPSNNFSPTCHL 824
Query: 327 RPA----CTDKDYFYTHTACDAN-----GETQLMYKWAKPKICSEDLEGAVKLPASGVKT 377
+ C YT C+ G+ + +P C+++L+ ++ +
Sbjct: 825 DRSLGLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLSG 884
Query: 378 HCPPCNPGFFKTNNSTCQPCPYGSYSNGSDCTRC 411
C C PG T C+ C G + + D C
Sbjct: 885 SCLICKPG---TTGRYCELCADGYFGDAVDAKNC 915
>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
sapiens]
Length = 3122
Score = 38.5 bits (88), Expect = 0.032
Identities = 33/154 (21%), Positives = 55/154 (35%), Gaps = 22/154 (14%)
Query: 272 TSECFPCKPGTYADKQGSSFCKLCPANSYSNKGETSCHQCDP-----DKYSEKGSSSCNV 326
T EC CK D G +C C Y + + C P + S S +C++
Sbjct: 770 TGECLNCK-----DHTGGPYCDKCLPGFYGEPTKGTSEDCQPCACPLNIPSNNFSPTCHL 824
Query: 327 RPA----CTDKDYFYTHTACDAN-----GETQLMYKWAKPKICSEDLEGAVKLPASGVKT 377
+ C YT C+ G+ + +P C+++L+ ++ +
Sbjct: 825 DRSLGLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLSG 884
Query: 378 HCPPCNPGFFKTNNSTCQPCPYGSYSNGSDCTRC 411
C C PG T C+ C G + + D C
Sbjct: 885 SCLICKPG---TTGRYCELCADGYFGDAVDAKNC 915
>gi|187960042 selectin E precursor [Homo sapiens]
Length = 610
Score = 37.7 bits (86), Expect = 0.055
Identities = 64/282 (22%), Positives = 93/282 (32%), Gaps = 71/282 (25%)
Query: 382 CNPGFFKTNNSTCQPCPYGSYSN---GSDCTRCPAGTEPAVGFEYKWWN--TLPTNMETT 436
C+ G+ ++ T Q G +S + C A T PA GF + N + P N T
Sbjct: 210 CDRGYLPSSMETMQCMSSGEWSAPIPACNVVECDAVTNPANGFVECFQNPGSFPWNTTCT 269
Query: 437 VLSGINFEYKGMTGWEVAGDHIYTAAGASDNDFMILTLVV-PGFRPPQSVMADTENKEVA 495
FE G + T++G DN+ V R PQ+ +
Sbjct: 270 FDCEEGFELMGAQSLQC------TSSGNWDNEKPTCKAVTCRAVRQPQNGSVRCSHSPAG 323
Query: 496 RITFVFETLCSVNCELYFMVGVNSRTNTPVETWKGSKGKQSYTYIIEENTTTSFTWAFQR 555
F F++ C+ CE FM+ P + ++G+ + + E AFQ
Sbjct: 324 E--FTFKSSCNFTCEEGFML------QGPAQVECTTQGQWTQQIPVCE--------AFQC 367
Query: 556 TTFHEASRKYTNDVAKIYSINVTNVMNGVASYCRPCALEASDVGSSCT-SCPAGYYI--- 611
T R Y N C P A + GSSC SC G+ +
Sbjct: 368 TALSNPERGYMN--------------------CLPSASGSFRYGSSCEFSCEQGFVLKGS 407
Query: 612 -----------DRDSGTC--------HSCPTNTILKAHQPYG 634
D + TC H P + AH P G
Sbjct: 408 KRLQCGPTGEWDNEKPTCEAVRCDAVHQPPKGLVRCAHSPIG 449
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,818,838
Number of Sequences: 37866
Number of extensions: 2127047
Number of successful extensions: 5292
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 4741
Number of HSP's gapped (non-prelim): 510
length of query: 1013
length of database: 18,247,518
effective HSP length: 112
effective length of query: 901
effective length of database: 14,006,526
effective search space: 12619879926
effective search space used: 12619879926
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.