Guide to the Human Genome
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Name: CASR Sequence: fasta or formatted (1078aa) NCBI GI: 37577159
Description:

calcium-sensing receptor

Referenced in:

Bone and Related Tissues
Calmodulin and Calcium
G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         73           2
 C cysteine            3.2         35           2
 D aspartate           3.7         40           3
 E glutamate           6.9         74           3
 F phenylalanine       7.1         76           3
 G glycine             6.0         65           3
 H histidine           2.0         22           1
 I isoleucine          7.1         77           2
 K lysine              4.4         47           2
 L leucine             9.1         98           3
 M methionine          0.8          9           1
 N asparagine          4.4         47           2
 P proline             4.5         49           2
 Q glutamine           4.5         49           4
 R arginine            4.4         47           2
 S serine              9.3        100           3
 T threonine           5.6         60           1
 V valine              5.9         64           2
 W tryptophan          1.7         18           2
 Y tyrosine            2.6         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium-sensing receptor 
GPRC6A                0.220   G protein-coupled receptor, family C, group 6, memb...
GRM3                  0.182   glutamate receptor, metabotropic 3 precursor 
TAS1R1                0.181   sweet taste receptor T1r isoform b 
GRM2                  0.179   glutamate receptor, metabotropic 2 isoform a precurs...
GRM4                  0.177   glutamate receptor, metabotropic 4 
GRM6                  0.177   glutamate receptor, metabotropic 6 precursor 
GRM8                  0.174   glutamate receptor, metabotropic 8 isoform b precur...
GRM7                  0.174   glutamate receptor, metabotropic 7 isoform a precurso...
GRM7                  0.173   glutamate receptor, metabotropic 7 isoform b precurs...
GRM8                  0.172   glutamate receptor, metabotropic 8 isoform a precur...
TAS1R3                0.169   taste receptor, type 1, member 3 
TAS1R2                0.169   taste receptor, type 1, member 2 
GRM5                  0.169   glutamate receptor, metabotropic 5 isoform b precurso...
GRM5                  0.167   glutamate receptor, metabotropic 5 isoform a precur...
GRM1                  0.162   glutamate receptor, metabotropic 1 isoform alpha pr...
GRM1                  0.161   glutamate receptor, metabotropic 1 isoform beta pre...
TAS1R1                0.090   sweet taste receptor T1r isoform a 
TAS1R1                0.082   sweet taste receptor T1r isoform c 
GRM2                  0.046   glutamate receptor, metabotropic 2 isoform b 
TAS1R1                0.030   sweet taste receptor T1r isoform d 
GRIN1                 0.016   NMDA receptor 1 isoform NR1-1 precursor 
GRIN1                 0.016   NMDA receptor 1 isoform NR1-3 precursor 
GRIN1                 0.016   NMDA receptor 1 isoform NR1-2 precursor 
GABBR2                0.015   G protein-coupled receptor 51 
GPRC5D                0.012   G protein-coupled receptor, family C, group 5, member...
GABBR1                0.012   gamma-aminobutyric acid (GABA) B receptor 1 isoform...
GABBR1                0.012   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GABBR1                0.012   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GRIK2                 0.011   glutamate receptor, ionotropic, kainate 2 isoform 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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