Guide to the Human Genome
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Name: ATF7IP2 Sequence: fasta or formatted (682aa) NCBI GI: 38569430
Description:

activating transcription factor 7 interacting protein 2

Referenced in:

CREB / ATF Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         28           2
 C cysteine            2.8         19           2
 D aspartate           4.0         27           2
 E glutamate           8.2         56           2
 F phenylalanine       2.6         18           1
 G glycine             2.6         18           1
 H histidine           1.8         12           1
 I isoleucine          5.3         36           2
 K lysine              8.9         61           2
 L leucine             7.8         53           2
 M methionine          1.8         12           1
 N asparagine          8.5         58           3
 P proline             6.2         42           2
 Q glutamine           3.8         26           2
 R arginine            3.7         25           2
 S serine             13.6         93           2
 T threonine           6.6         45           2
 V valine              6.0         41           2
 W tryptophan          0.4          3           1
 Y tyrosine            1.3          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   activating transcription factor 7 interacting protei... 
ATF7IP                0.086   activating transcription factor 7 interacting protei...
ATRX                  0.019   transcriptional regulator ATRX isoform 2 
ATRX                  0.019   transcriptional regulator ATRX isoform 1 
DSPP                  0.017   dentin sialophosphoprotein preproprotein 
MUC21                 0.016   mucin 21 
LOC100294236          0.014   PREDICTED: similar to diffuse panbronchiolitis crit...
MLL                   0.014   myeloid/lymphoid or mixed-lineage leukemia protein [...
REST                  0.014   RE1-silencing transcription factor 
DPCR1                 0.013   diffuse panbronchiolitis critical region 1 protein ...
BDP1                  0.013   transcription factor-like nuclear regulator 
JAKMIP2               0.012   Janus kinase and microtubule interacting protein 2 [...
TP53BP2               0.011   tumor protein p53 binding protein, 2 isoform 1 [Hom...
TP53BP2               0.011   tumor protein p53 binding protein, 2 isoform 2 
CDK5RAP2              0.011   CDK5 regulatory subunit associated protein 2 isoform...
FHAD1                 0.011   forkhead-associated (FHA) phosphopeptide binding do...
BCL9                  0.011   B-cell CLL/lymphoma 9 
MUC17                 0.011   mucin 17 
XIRP2                 0.011   xin actin-binding repeat containing 2 isoform 1 [Ho...
NAV1                  0.011   neuron navigator 1 
CRKRS                 0.011   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.011   Cdc2-related kinase, arginine/serine-rich isoform 1...
DMP1                  0.010   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.010   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
MUC3A                 0.010   PREDICTED: mucin 3A, intestinal 
AKAP9                 0.010   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.010   A-kinase anchor protein 9 isoform 3 
MYO10                 0.010   myosin X 
PDS5A                 0.010   PDS5, regulator of cohesion maintenance, homolog A ...
PDS5A                 0.010   PDS5, regulator of cohesion maintenance, homolog A ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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