LOC645139 8786

Name: LOC645139	Sequence: fasta or formatted (516aa)		NCBI GI: 169212085
Description: PREDICTED: similar to poly(A) binding protein interacting protein 1		Referenced in: Polyadenylation
Other entries for this name: alt prot [457aa] PREDICTED: similar to poly(A) binding protein interacting protein 1 alt prot [488aa] PREDICTED: similar to poly(A) binding protein interacting protein 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 33 2 C cysteine 2.1 11 2 D aspartate 5.8 30 2 E glutamate 9.3 48 2 F phenylalanine 4.1 21 2 G glycine 6.0 31 2 H histidine 1.6 8 2 I isoleucine 2.9 15 2 K lysine 4.3 22 1 L leucine 9.5 49 3 M methionine 1.9 10 1 N asparagine 4.5 23 1 P proline 8.9 46 3 Q glutamine 5.8 30 2 R arginine 5.2 27 1 S serine 7.0 36 3 T threonine 5.0 26 2 V valine 5.6 29 3 W tryptophan 0.4 2 1 Y tyrosine 3.7 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to poly(A) binding protein inter... LOC645139 0.866 PREDICTED: similar to poly(A) binding protein intera... LOC645139 0.864 PREDICTED: similar to poly(A) binding protein inter... PAIP1 0.852 poly(A) binding protein interacting protein 1 isofor... PAIP1 0.732 poly(A) binding protein interacting protein 1 isofor... PAIP1 0.687 poly(A) binding protein interacting protein 1 isofor... EIF4G1 0.051 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.051 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.051 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.051 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.051 eukaryotic translation initiation factor 4 gamma, 1 ... KIAA0427 0.048 hypothetical protein LOC9811 isoform 2 KIAA0427 0.047 hypothetical protein LOC9811 isoform 1 EIF4G3 0.039 eukaryotic translation initiation factor 4 gamma, 3 ... PRB2 0.022 proline-rich protein BstNI subfamily 2 PRB4 0.021 proline-rich protein BstNI subfamily 4 precursor [Ho... PRB1 0.020 proline-rich protein BstNI subfamily 1 isoform 3 pre... PRR12 0.020 proline rich 12 MLL4 0.020 myeloid/lymphoid or mixed-lineage leukemia 4 SETD1B 0.020 SET domain containing 1B PRB1 0.020 proline-rich protein BstNI subfamily 1 isoform 2 pre... PRB1 0.019 proline-rich protein BstNI subfamily 1 isoform 1 pre... TTN 0.019 titin isoform N2-A FMNL1 0.019 formin-like 1 SMR3B 0.018 submaxillary gland androgen regulated protein 3 homol... LMTK3 0.018 lemur tyrosine kinase 3 SAMD1 0.017 sterile alpha motif domain containing 1 PCLO 0.017 piccolo isoform 2 PCLO 0.017 piccolo isoform 1 SON 0.017 SON DNA-binding protein isoform F Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.