Guide to the Human Genome
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Name: EIF4G1 Sequence: fasta or formatted (1403aa) NCBI GI: 38201619
Description:

eukaryotic translation initiation factor 4 gamma, 1 isoform 4

Referenced in:

Small RNAs in RNA Processing
Translation Factors

Other entries for this name:
alt prot [1599aa] eukaryotic translation initiation factor 4 gamma, 1 isoform 1
alt prot [1599aa] eukaryotic translation initiation factor 4 gamma, 1 isoform 1
alt prot [1435aa] eukaryotic translation initiation factor 4 gamma, 1 isoform 3
alt prot [1512aa] eukaryotic translation initiation factor 4 gamma, 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2        115           4
 C cysteine            0.9         13           1
 D aspartate           4.8         68           3
 E glutamate          11.6        163           8
 F phenylalanine       2.5         35           2
 G glycine             6.5         91           3
 H histidine           1.2         17           1
 I isoleucine          4.0         56           2
 K lysine              6.6         92           2
 L leucine             9.8        137           3
 M methionine          1.9         27           1
 N asparagine          2.7         38           2
 P proline             8.8        124           3
 Q glutamine           4.4         62           2
 R arginine            6.3         89           3
 S serine              7.7        108           3
 T threonine           4.9         69           2
 V valine              5.0         70           2
 W tryptophan          0.9         12           1
 Y tyrosine            1.2         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation initiation factor 4 gamma, 1 ... 
EIF4G1                1.000   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                1.000   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                1.000   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                1.000   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G3                0.415   eukaryotic translation initiation factor 4 gamma, 3 ...
EIF4G2                0.062   eukaryotic translation initiation factor 4 gamma, 2...
EIF4G2                0.062   eukaryotic translation initiation factor 4 gamma, 2 i...
PAIP1                 0.020   poly(A) binding protein interacting protein 1 isofor...
PAIP1                 0.020   poly(A) binding protein interacting protein 1 isofor...
LOC645139             0.019   PREDICTED: similar to poly(A) binding protein inter...
LOC645139             0.019   PREDICTED: similar to poly(A) binding protein inter...
LOC645139             0.019   PREDICTED: similar to poly(A) binding protein intera...
PAIP1                 0.019   poly(A) binding protein interacting protein 1 isofor...
NACA                  0.018   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.018   PREDICTED: hypothetical protein FLJ22184 
MUC2                  0.017   mucin 2 precursor 
FLJ22184              0.017   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.017   PREDICTED: hypothetical protein LOC80164 
MLL2                  0.017   myeloid/lymphoid or mixed-lineage leukemia 2 
KIAA0754              0.017   hypothetical protein LOC643314 
NEFH                  0.017   neurofilament, heavy polypeptide 200kDa 
PELP1                 0.016   proline, glutamic acid and leucine rich protein 1 [...
DGKK                  0.015   diacylglycerol kinase kappa 
CASKIN2               0.015   cask-interacting protein 2 isoform b 
CASKIN2               0.015   cask-interacting protein 2 isoform a 
LOC100128719          0.015   PREDICTED: hypothetical protein, partial 
LOC100128719          0.015   PREDICTED: hypothetical protein, partial 
LOC100134147          0.015   PREDICTED: hypothetical protein 
PTPN23                0.014   protein tyrosine phosphatase, non-receptor type 23 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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