LOC645139 36829

Name: LOC645139	Sequence: fasta or formatted (488aa)		NCBI GI: 89041275
Description: PREDICTED: similar to poly(A) binding protein interacting protein 1		Referenced in: Polyadenylation
Other entries for this name: alt prot [516aa] PREDICTED: similar to poly(A) binding protein interacting protein 1 alt prot [457aa] PREDICTED: similar to poly(A) binding protein interacting protein 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 36 2 C cysteine 1.6 8 1 D aspartate 5.7 28 2 E glutamate 9.2 45 2 F phenylalanine 3.7 18 2 G glycine 5.7 28 2 H histidine 1.6 8 2 I isoleucine 2.9 14 2 K lysine 4.1 20 1 L leucine 9.4 46 3 M methionine 2.0 10 1 N asparagine 4.3 21 1 P proline 8.6 42 3 Q glutamine 6.1 30 2 R arginine 5.5 27 1 S serine 7.6 37 3 T threonine 5.3 26 2 V valine 4.7 23 3 W tryptophan 0.4 2 1 Y tyrosine 3.9 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to poly(A) binding protein intera... LOC645139 0.923 PREDICTED: similar to poly(A) binding protein inter... LOC645139 0.921 PREDICTED: similar to poly(A) binding protein inter... PAIP1 0.902 poly(A) binding protein interacting protein 1 isofor... PAIP1 0.779 poly(A) binding protein interacting protein 1 isofor... PAIP1 0.732 poly(A) binding protein interacting protein 1 isofor... EIF4G1 0.055 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.055 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.055 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.055 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.055 eukaryotic translation initiation factor 4 gamma, 1 ... KIAA0427 0.052 hypothetical protein LOC9811 isoform 2 KIAA0427 0.050 hypothetical protein LOC9811 isoform 1 EIF4G3 0.041 eukaryotic translation initiation factor 4 gamma, 3 ... ALX4 0.022 aristaless-like homeobox 4 PRR12 0.022 proline rich 12 MLL4 0.022 myeloid/lymphoid or mixed-lineage leukemia 4 SETD1B 0.022 SET domain containing 1B FMNL1 0.021 formin-like 1 PCLO 0.020 piccolo isoform 2 PCLO 0.020 piccolo isoform 1 SMR3B 0.019 submaxillary gland androgen regulated protein 3 homol... SAMD1 0.019 sterile alpha motif domain containing 1 SON 0.019 SON DNA-binding protein isoform F SON 0.019 SON DNA-binding protein isoform B PRB2 0.019 proline-rich protein BstNI subfamily 2 FAM71E2 0.018 hypothetical protein LOC284418 TTN 0.018 titin isoform N2-A EP300 0.018 E1A binding protein p300 FSCB 0.018 fibrous sheath CABYR binding protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.