BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|38016202 SATB homeobox 2 [Homo sapiens] (733 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|38016202 SATB homeobox 2 [Homo sapiens] 1462 0.0 gi|196114999 special AT-rich sequence binding protein 1 [Homo sa... 857 0.0 gi|4506791 special AT-rich sequence binding protein 1 [Homo sapi... 857 0.0 gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 48 3e-05 gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 47 6e-05 gi|119220564 one cut domain, family member 2 [Homo sapiens] 46 1e-04 gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] 44 4e-04 gi|24307887 one cut homeobox 1 [Homo sapiens] 44 4e-04 gi|90903231 huntingtin [Homo sapiens] 43 0.001 gi|122937424 one cut homeobox 3 [Homo sapiens] 43 0.001 gi|116517292 cut-like 2 [Homo sapiens] 42 0.003 gi|39930383 BarH-like homeobox 2 [Homo sapiens] 41 0.003 gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 41 0.003 gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 41 0.005 gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 41 0.005 gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 41 0.005 gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 40 0.006 gi|239757043 PREDICTED: functional smad suppressing element 18 [... 40 0.008 gi|239751555 PREDICTED: functional smad suppressing element 18 [... 40 0.008 gi|239746067 PREDICTED: functional smad suppressing element 18 [... 40 0.008 gi|57232759 intestine-specific homeobox [Homo sapiens] 39 0.013 gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 39 0.022 gi|110349719 titin isoform N2-A [Homo sapiens] 38 0.038 gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 37 0.065 gi|7657116 glyceraldehyde-3-phosphate dehydrogenase, spermatogen... 37 0.085 gi|41152235 ubiquitin specific protease 51 [Homo sapiens] 37 0.085 gi|46249382 paired-like homeobox 2a [Homo sapiens] 36 0.11 gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming... 36 0.15 gi|210032580 SET domain containing 1B [Homo sapiens] 36 0.15 gi|156415988 zinc finger and BTB domain containing 7B [Homo sapi... 35 0.19 >gi|38016202 SATB homeobox 2 [Homo sapiens] Length = 733 Score = 1462 bits (3784), Expect = 0.0 Identities = 733/733 (100%), Positives = 733/733 (100%) Query: 1 MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVGGLMI 60 MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVGGLMI Sbjct: 1 MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVGGLMI 60 Query: 61 PVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLALGYSHSSAAQAQGIIKL 120 PVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLALGYSHSSAAQAQGIIKL Sbjct: 61 PVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLALGYSHSSAAQAQGIIKL 120 Query: 121 GRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQWNHATVRNALK 180 GRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQWNHATVRNALK Sbjct: 121 GRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQWNHATVRNALK 180 Query: 181 ELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGRWYKKYKKIKVERVERE 240 ELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGRWYKKYKKIKVERVERE Sbjct: 181 ELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGRWYKKYKKIKVERVERE 240 Query: 241 NLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSPGLLSP 300 NLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSPGLLSP Sbjct: 241 NLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPHSQIHHSTPIRNQVPALQPIMSPGLLSP 300 Query: 301 QLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEPTNSSVEV 360 QLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEPTNSSVEV Sbjct: 301 QLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVKPEPTNSSVEV 360 Query: 361 SPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQN 420 SPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQN Sbjct: 361 SPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQN 420 Query: 421 FLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSSSRTPQAKTSTPTTDLPIKVDGAN 480 FLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSSSRTPQAKTSTPTTDLPIKVDGAN Sbjct: 421 FLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSSSRTPQAKTSTPTTDLPIKVDGAN 480 Query: 481 INITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCT 540 INITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCT Sbjct: 481 INITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCT 540 Query: 541 IRRFLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEA 600 IRRFLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEA Sbjct: 541 IRRFLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEA 600 Query: 601 PPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTII 660 PPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTII Sbjct: 601 PPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTII 660 Query: 661 KFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENA 720 KFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENA Sbjct: 661 KFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENA 720 Query: 721 DKSKAAPAEIDQR 733 DKSKAAPAEIDQR Sbjct: 721 DKSKAAPAEIDQR 733 >gi|196114999 special AT-rich sequence binding protein 1 [Homo sapiens] Length = 763 Score = 857 bits (2213), Expect = 0.0 Identities = 463/758 (61%), Positives = 560/758 (73%), Gaps = 50/758 (6%) Query: 1 MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVG---- 56 M+ +E+ ++ + + D KGPP K+ARLEQNGSP+G RGR AK G Sbjct: 1 MDHLNEATQGKEHSEMSNNVSDPKGPP-AKIARLEQNGSPLG-RGRLGSTGAKMQGVPLK 58 Query: 57 ------------GLMIPVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLAL 104 G M+PVFCVVE + ++EYD +EEHAEFVLVRKD+LF+QL+E ALL+L Sbjct: 59 HSGHLMKTNLRKGTMLPVFCVVEHYENAIEYDCKEEHAEFVLVRKDMLFNQLIEMALLSL 118 Query: 105 GYSHSSAAQAQGIIKLGRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLED 164 GYSHSSAAQA+G+I++G+WNP+PLSYVTDAPDATVADMLQDVYHVVTLKIQL SC KLED Sbjct: 119 GYSHSSAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQLHSCPKLED 178 Query: 165 LPAEQWNHATVRNALKELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGR 224 LP EQW+H TVRNALK+LLK+MNQS+LAKECPLSQSMISSIVNSTYYANVSA KCQEFGR Sbjct: 179 LPPEQWSHTTVRNALKDLLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGR 238 Query: 225 WYKKYKKIKVERVERENLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPH-SQIHHSTPIR 283 WYK +KK K VE ++LS+ L Q+ + N Q G T EQ P +Q+ H + Sbjct: 239 WYKHFKKTKDMMVEMDSLSE---LSQQGANHVNFGQQPVPGNTAEQPPSPAQLSHGSQPS 295 Query: 284 NQVPALQPIMSPGLLSPQLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNH- 342 + P P + PGL+S +SPQLV QQ+ MA L+NQQ AV+RLLA Q++NQQ+LNH Sbjct: 296 VRTPL--PNLHPGLVSTPISPQLVNQQLVMAQLLNQQYAVNRLLAQ---QSLNQQYLNHP 350 Query: 343 PPIPRAV-KP--EPTNSSVEVSPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILR 399 PP+ R++ KP + +++ EVS +IYQ VRDELKRA +SQAVFARVAFNRTQGLLSEILR Sbjct: 351 PPVSRSMNKPLEQQVSTNTEVSSEIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEILR 410 Query: 400 KEEDPRTASQSLLVNLRAMQNFLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSSSR 459 KEEDP+TASQSLLVNLRAMQNFL LPE ERDRIYQDERERS+N +M + S SR Sbjct: 411 KEEDPKTASQSLLVNLRAMQNFLQLPEAERDRIYQDERERSLNAASAMGPAPLISTPPSR 470 Query: 460 TPQAKTSTPTTDLPIKVDGANINITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCE 519 PQ KT+T T+ K + +NI A+IYDEIQQEMKRAKVSQALFAKVAA KSQGWLCE Sbjct: 471 PPQVKTATIATERNGKPENNTMNINASIYDEIQQEMKRAKVSQALFAKVAATKSQGWLCE 530 Query: 520 LLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVIYEEESR--HHHSERMQHVVQLPPE 577 LLRWKE+PSPENRTLWENL IRRFL+LPQ ERD IYE+ES HHH +R H++ +P E Sbjct: 531 LLRWKEDPSPENRTLWENLSMIRRFLSLPQPERDAIYEQESNAVHHHGDRPPHIIHVPAE 590 Query: 578 PVQVLHRQQSQPAKESS-----------------PPREEAPPPPPPTEDSCAKKPRSRTK 620 +Q +QQ Q ++ PPR+ P +++ +K R RTK Sbjct: 591 QIQQQQQQQQQQQQQQQAPPPPQPQQQPQTGPRLPPRQPTVASPAESDEENRQKTRPRTK 650 Query: 621 ISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGKLKEHL 680 IS+EALGILQSFI DVGLYPD+EAI TLSAQLDLPK+TIIKFFQNQRY++KHHGKLK++ Sbjct: 651 ISVEALGILQSFIQDVGLYPDEEAIQTLSAQLDLPKYTIIKFFQNQRYYLKHHGKLKDNS 710 Query: 681 GSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEE 718 G VDVAEYK+EELL + EE+ ++ + ++ V+ EEE Sbjct: 711 GLEVDVAEYKEEELLKDLEESVQDKNTNTLFSVKLEEE 748 >gi|4506791 special AT-rich sequence binding protein 1 [Homo sapiens] Length = 763 Score = 857 bits (2213), Expect = 0.0 Identities = 463/758 (61%), Positives = 560/758 (73%), Gaps = 50/758 (6%) Query: 1 MERRSESPCLRDSPDRRSGSPDVKGPPPVKVARLEQNGSPMGARGRPNGAVAKAVG---- 56 M+ +E+ ++ + + D KGPP K+ARLEQNGSP+G RGR AK G Sbjct: 1 MDHLNEATQGKEHSEMSNNVSDPKGPP-AKIARLEQNGSPLG-RGRLGSTGAKMQGVPLK 58 Query: 57 ------------GLMIPVFCVVEQLDGSLEYDNREEHAEFVLVRKDVLFSQLVETALLAL 104 G M+PVFCVVE + ++EYD +EEHAEFVLVRKD+LF+QL+E ALL+L Sbjct: 59 HSGHLMKTNLRKGTMLPVFCVVEHYENAIEYDCKEEHAEFVLVRKDMLFNQLIEMALLSL 118 Query: 105 GYSHSSAAQAQGIIKLGRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLED 164 GYSHSSAAQA+G+I++G+WNP+PLSYVTDAPDATVADMLQDVYHVVTLKIQL SC KLED Sbjct: 119 GYSHSSAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQLHSCPKLED 178 Query: 165 LPAEQWNHATVRNALKELLKEMNQSTLAKECPLSQSMISSIVNSTYYANVSATKCQEFGR 224 LP EQW+H TVRNALK+LLK+MNQS+LAKECPLSQSMISSIVNSTYYANVSA KCQEFGR Sbjct: 179 LPPEQWSHTTVRNALKDLLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGR 238 Query: 225 WYKKYKKIKVERVERENLSDYCVLGQRPMHLPNMNQLASLGKTNEQSPH-SQIHHSTPIR 283 WYK +KK K VE ++LS+ L Q+ + N Q G T EQ P +Q+ H + Sbjct: 239 WYKHFKKTKDMMVEMDSLSE---LSQQGANHVNFGQQPVPGNTAEQPPSPAQLSHGSQPS 295 Query: 284 NQVPALQPIMSPGLLSPQLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNH- 342 + P P + PGL+S +SPQLV QQ+ MA L+NQQ AV+RLLA Q++NQQ+LNH Sbjct: 296 VRTPL--PNLHPGLVSTPISPQLVNQQLVMAQLLNQQYAVNRLLAQ---QSLNQQYLNHP 350 Query: 343 PPIPRAV-KP--EPTNSSVEVSPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILR 399 PP+ R++ KP + +++ EVS +IYQ VRDELKRA +SQAVFARVAFNRTQGLLSEILR Sbjct: 351 PPVSRSMNKPLEQQVSTNTEVSSEIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEILR 410 Query: 400 KEEDPRTASQSLLVNLRAMQNFLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSSSR 459 KEEDP+TASQSLLVNLRAMQNFL LPE ERDRIYQDERERS+N +M + S SR Sbjct: 411 KEEDPKTASQSLLVNLRAMQNFLQLPEAERDRIYQDERERSLNAASAMGPAPLISTPPSR 470 Query: 460 TPQAKTSTPTTDLPIKVDGANINITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCE 519 PQ KT+T T+ K + +NI A+IYDEIQQEMKRAKVSQALFAKVAA KSQGWLCE Sbjct: 471 PPQVKTATIATERNGKPENNTMNINASIYDEIQQEMKRAKVSQALFAKVAATKSQGWLCE 530 Query: 520 LLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVIYEEESR--HHHSERMQHVVQLPPE 577 LLRWKE+PSPENRTLWENL IRRFL+LPQ ERD IYE+ES HHH +R H++ +P E Sbjct: 531 LLRWKEDPSPENRTLWENLSMIRRFLSLPQPERDAIYEQESNAVHHHGDRPPHIIHVPAE 590 Query: 578 PVQVLHRQQSQPAKESS-----------------PPREEAPPPPPPTEDSCAKKPRSRTK 620 +Q +QQ Q ++ PPR+ P +++ +K R RTK Sbjct: 591 QIQQQQQQQQQQQQQQQAPPPPQPQQQPQTGPRLPPRQPTVASPAESDEENRQKTRPRTK 650 Query: 621 ISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGKLKEHL 680 IS+EALGILQSFI DVGLYPD+EAI TLSAQLDLPK+TIIKFFQNQRY++KHHGKLK++ Sbjct: 651 ISVEALGILQSFIQDVGLYPDEEAIQTLSAQLDLPKYTIIKFFQNQRYYLKHHGKLKDNS 710 Query: 681 GSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEE 718 G VDVAEYK+EELL + EE+ ++ + ++ V+ EEE Sbjct: 711 GLEVDVAEYKEEELLKDLEESVQDKNTNTLFSVKLEEE 748 >gi|118498345 AT-binding transcription factor 1 [Homo sapiens] Length = 3703 Score = 48.1 bits (113), Expect = 3e-05 Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 10/93 (10%) Query: 584 RQQSQPAKESSPP---------REEAPPPPPPTEDSCAKKPRSRTKISLEALGILQSFIH 634 R + P S+PP P P PP ++ K SRT+ + L +LQ F Sbjct: 2203 RNKDSPYNFSNPPITSLEELKIDSRPPSPEPPKQEYWGSKRSSRTRFTDYQLRVLQDFF- 2261 Query: 635 DVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQR 667 D YP + LS L+LP I+ +FQN R Sbjct: 2262 DANAYPKDDEFEQLSNLLNLPTRVIVVWFQNAR 2294 Score = 32.3 bits (72), Expect = 1.6 Identities = 17/45 (37%), Positives = 25/45 (55%) Query: 688 EYKDEELLTESEENDSEEGSEEMYKVEAEEENADKSKAAPAEIDQ 732 E +EE E EE ++EE EE + E EEE+ P+E+D+ Sbjct: 457 EPAEEEAEEEEEEEEAEEEEEEEEEEEEEEEDEGCKGLFPSELDE 501 Score = 30.8 bits (68), Expect = 4.7 Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 3/96 (3%) Query: 616 RSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGK 675 R RT+I+ + L +L+ + D+ P +E I ++ + LP+ I +F+N + + K Sbjct: 2147 RPRTRITDDQLRVLRQYF-DINNSPSEEQIKEMADKSGLPQKVIKHWFRNTLFKERQRNK 2205 Query: 676 LKEHLGSAVDVAEYKDEELLTESEENDSEEGSEEMY 711 + S + EEL +S E +E + Sbjct: 2206 DSPYNFSNPPITSL--EELKIDSRPPSPEPPKQEYW 2239 Score = 30.0 bits (66), Expect = 8.0 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 4/34 (11%) Query: 573 QLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPP 606 Q PP+ Q QQ QP + PP A PPP P Sbjct: 3193 QQPPQQQQ----QQQQPQVQQPPPPPAAQPPPTP 3222 >gi|126090663 zinc finger homeodomain 4 [Homo sapiens] Length = 3571 Score = 47.0 bits (110), Expect = 6e-05 Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 28/137 (20%) Query: 584 RQQSQPAKESSPP---REEAPPPPPPTE------DSCAKKPRSRTKISLEALGILQSFIH 634 R + P S+PP E+ P PT D+ K SRT+ + L +LQ F Sbjct: 2142 RNKDSPYNFSNPPITVLEDIRIDPQPTSLEHYKSDASFSKRSSRTRFTDYQLRVLQDFF- 2200 Query: 635 DVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEEL 694 D YP + I LS L+LP I+ +FQN R + K E Sbjct: 2201 DTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKAR------------------KSYEN 2242 Query: 695 LTESEENDSEEGSEEMY 711 E+++N+ E + E Y Sbjct: 2243 QAETKDNEKRELTNERY 2259 Score = 30.8 bits (68), Expect = 4.7 Identities = 13/39 (33%), Positives = 19/39 (48%) Query: 586 QSQPAKESSPPREEAPPPPPPTEDSCAKKPRSRTKISLE 624 Q+ P PP PPPPPP + P+ + +SL+ Sbjct: 1991 QAPPPTPPPPPPPPPPPPPPPPPPPPSAPPQVQLPVSLD 2029 >gi|119220564 one cut domain, family member 2 [Homo sapiens] Length = 504 Score = 46.2 bits (108), Expect = 1e-04 Identities = 59/222 (26%), Positives = 91/222 (40%), Gaps = 42/222 (18%) Query: 241 NLSDYCVLGQRPMHLPNMNQLASL-----GKTNEQSPHSQIHHSTPIRNQVPALQ----- 290 N+S L + LP MN L S G + SP + +TP+ N + L Sbjct: 190 NVSGSFTLMRDERGLPAMNNLYSPYKEMPGMSQSLSPLA----ATPLGNGLGGLHNAQQS 245 Query: 291 -PIMSPGLLSPQLSPQLVRQQIAMAHLINQQIA----------VSRLLAHQHPQAINQQF 339 P P LSP AM Q ++ +S L HP Sbjct: 246 LPNYGPPGHDKMLSPNFDAHHTAMLTRGEQHLSRGLGTPPAAMMSHLNGLHHPGHTQ--- 302 Query: 340 LNHPPI--PRAVKPEPTNSSVEVSP----------DIYQQVRDELKRASVSQAVFARVAF 387 +H P+ P +P ++S +V+ ++ Q++ ELKR S+ QA+FA+ Sbjct: 303 -SHGPVLAPSRERPPSSSSGSQVATSGQLEEINTKEVAQRITAELKRYSIPQAIFAQRVL 361 Query: 388 NRTQGLLSEILRKEEDPRTASQSLLVNLRAMQNFLNLPEVER 429 R+QG LS++LR + P + +S R M +L PE +R Sbjct: 362 CRSQGTLSDLLRNPK-PWSKLKSGRETFRRMWKWLQEPEFQR 402 Score = 37.0 bits (84), Expect = 0.065 Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 17/109 (15%) Query: 447 MVSSASSSPSSSRTPQAKTSTPTTDLPIKVDGANINITAAIYDEIQQEMKRAKVSQALFA 506 + S PSSS Q TS ++ K + I E+KR + QA+FA Sbjct: 308 LAPSRERPPSSSSGSQVATSGQLEEINTK----------EVAQRITAELKRYSIPQAIFA 357 Query: 507 KVAANKSQGWLCELLRWKENPSPENRTLWENLCTIRR---FLNLPQHER 552 + +SQG L +LLR NP P ++ L T RR +L P+ +R Sbjct: 358 QRVLCRSQGTLSDLLR---NPKPWSK-LKSGRETFRRMWKWLQEPEFQR 402 >gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] Length = 1505 Score = 44.3 bits (103), Expect = 4e-04 Identities = 66/294 (22%), Positives = 109/294 (37%), Gaps = 34/294 (11%) Query: 438 ERSMNPNVSMVSSASSSPSSSRTPQAKTSTPTTDLPIKVDGANINI-----------TAA 486 E P + +S S P P A S PTT LP+ A ++I T Sbjct: 1072 ELVQQPCPPIEASKDSKPPEPSDPPASDSQPTTPLPLSGHSA-LSIQELVAMSPELDTYG 1130 Query: 487 IYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLW---ENLCTIRR 543 I +++ + + Q LF + +QG + +LL P P ++ E ++ Sbjct: 1131 ITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLA---RPKPWHKLSLKGREPFVRMQL 1187 Query: 544 FLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPP 603 +LN P + ++ +RM+ + V Q +P + + A P Sbjct: 1188 WLNDPNNVEKLM--------DMKRMEKKAYMKRRHSSVSDSQPCEPPSVGTEYSQGASPQ 1239 Query: 604 PPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFF 663 P KKPR ++ E L+ + YP + I L+ QL+L T+I +F Sbjct: 1240 PQHQ----LKKPR--VVLAPEEKEALKR-AYQQKPYPSPKTIEDLATQLNLKTSTVINWF 1292 Query: 664 QNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEE 717 N R ++ ++E + A D S EG + VEA E Sbjct: 1293 HNYRSRIRRELFIEEIQAGSQGQAGASDSPSARSGRAAPSSEG-DSCDGVEATE 1345 Score = 31.6 bits (70), Expect = 2.7 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 25/168 (14%) Query: 252 PMHLPNM--NQLASLGKTNEQSPH--SQIHHSTPIRNQVPALQPIMSPG--LLSPQLSPQ 305 P LP Q ++ T++ SP SQ S+ + + P+L P+ S G L+ L Q Sbjct: 431 PSQLPRNPGEQASNTNGTHQFSPAGLSQDFFSSSLAS--PSL-PLASTGKFALNSLLQRQ 487 Query: 306 LVRQQIAMAHLINQQIAVSRLLAHQHPQAIN----QQFLNHPPIPRAVKPEPTNSSVEVS 361 L++ + A Q+ + ++ P + N Q L P + P P+ S S Sbjct: 488 LMQSFYSKAM---QEAGSTSMIFSTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGS 544 Query: 362 ---------PDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRK 400 +I +QV+++L + ++ Q +F +QG +SEIL + Sbjct: 545 VSEGEEMDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILAR 592 >gi|24307887 one cut homeobox 1 [Homo sapiens] Length = 465 Score = 44.3 bits (103), Expect = 4e-04 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 4/109 (3%) Query: 324 SRLLAHQHPQAINQQFLNHPPIPRAVKPEPTNSSV--EVSP-DIYQQVRDELKRASVSQA 380 + L A H Q + +P + A +NS E++ ++ Q++ ELKR S+ QA Sbjct: 254 AHLNAQGHGQLLGTAREPNPSVTGAQVSNGSNSGQMEEINTKEVAQRITTELKRYSIPQA 313 Query: 381 VFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQNFLNLPEVER 429 +FA+ R+QG LS++LR + P + +S R M +L PE +R Sbjct: 314 IFAQRVLCRSQGTLSDLLRNPK-PWSKLKSGRETFRRMWKWLQEPEFQR 361 Score = 36.6 bits (83), Expect = 0.085 Identities = 48/187 (25%), Positives = 67/187 (35%), Gaps = 46/187 (24%) Query: 484 TAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCTIRR 543 T + I E+KR + QA+FA+ +SQG L +LLR NP P W L Sbjct: 294 TKEVAQRITTELKRYSIPQAIFAQRVLCRSQGTLSDLLR---NPKP-----WSKL----- 340 Query: 544 FLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPP 603 +S RM +Q P R + KE ++ P Sbjct: 341 ---------------KSGRETFRRMWKWLQEPEFQRMSALRLAACKRKEQEHGKDRGNTP 385 Query: 604 PPPTEDSCAKKPRSRTKISLEALGILQSFIHDV---GLYPDQEAIHTLSAQLDLPKHTII 660 KKPR L + + +H + P +E T+S QL L T+ Sbjct: 386 ---------KKPR------LVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVS 430 Query: 661 KFFQNQR 667 FF N R Sbjct: 431 NFFMNAR 437 >gi|90903231 huntingtin [Homo sapiens] Length = 3144 Score = 43.1 bits (100), Expect = 0.001 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 4/89 (4%) Query: 541 IRRFLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSP----P 596 ++ F +L ++ +++ + ++ Q Q PP P Q QP ++ P P Sbjct: 8 MKAFESLKSFQQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQLPQPPPQAQPLLPQP 67 Query: 597 REEAPPPPPPTEDSCAKKPRSRTKISLEA 625 + PPPPPP + A++P R K L A Sbjct: 68 QPPPPPPPPPPGPAVAEEPLHRPKKELSA 96 >gi|122937424 one cut homeobox 3 [Homo sapiens] Length = 494 Score = 43.1 bits (100), Expect = 0.001 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 11/91 (12%) Query: 363 DIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQNFL 422 ++ Q++ ELKR S+ QA+FA+ R+QG LS++LR + P + +S R M +L Sbjct: 325 EVAQRITAELKRYSIPQAIFAQRILCRSQGTLSDLLRNPK-PWSKLKSGRETFRRMWKWL 383 Query: 423 NLPEVER----------DRIYQDERERSMNP 443 PE +R + + ++ER++ P Sbjct: 384 QEPEFQRMSALRLAACKRKEQEQQKERALQP 414 Score = 36.6 bits (83), Expect = 0.085 Identities = 47/184 (25%), Positives = 67/184 (36%), Gaps = 40/184 (21%) Query: 484 TAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPENRTLWENLCTIRR 543 T + I E+KR + QA+FA+ +SQG L +LLR NP P W L Sbjct: 323 TKEVAQRITAELKRYSIPQAIFAQRILCRSQGTLSDLLR---NPKP-----WSKL----- 369 Query: 544 FLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPP 603 +S RM +Q P R + KE +E A P Sbjct: 370 ---------------KSGRETFRRMWKWLQEPEFQRMSALRLAACKRKEQEQQKERALQP 414 Query: 604 PPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFF 663 K + L+ ++ F + P +E T+S QL L +T+ FF Sbjct: 415 ----------KKQRLVFTDLQRRTLIAIFKEN--KRPSKEMQVTISQQLGLELNTVSNFF 462 Query: 664 QNQR 667 N R Sbjct: 463 MNAR 466 >gi|116517292 cut-like 2 [Homo sapiens] Length = 1486 Score = 41.6 bits (96), Expect = 0.003 Identities = 75/351 (21%), Positives = 140/351 (39%), Gaps = 68/351 (19%) Query: 363 DIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQNFL 422 ++ +QV+++L + + Q +F +QG +S++L + + +Q + + F+ Sbjct: 900 ELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQ------KGREPFI 953 Query: 423 NLPEVERDRIYQDERERSMNPNVSMVSSASS-SPSSSRTPQAKTSTPTTDLPIKVDGAN- 480 + D++ Q ++ S SS SP S T K+S L ++ N Sbjct: 954 RMQLWLSDQLGQAVGQQPGASQASPTEPRSSPSPPPSPTEPEKSSQEPLSLSLESSKENQ 1013 Query: 481 -------INITAAIYDEIQ-----QEM-------------KRAK-------VSQALFAKV 508 +++ +Y Q QE+ KR K + Q LF + Sbjct: 1014 QPEGRSSSSLSGKMYSGSQAPGGIQEIVAMSPELDTYSITKRVKEVLTDNNLGQRLFGES 1073 Query: 509 AANKSQGWLCELLRWKENPSPENRTLW---ENLCTIRRFLNLPQHERDVIYEEESRHHHS 565 +QG + +LL P P ++ E ++ +LN P H+ Sbjct: 1074 ILGLTQGSVSDLL---SRPKPWHKLSLKGREPFVRMQLWLNDP--------------HNV 1116 Query: 566 ERMQHVVQLPPEPVQVLHRQ----QSQPAKESSPPREEAPPPPPPTED-SCAKKPRSRTK 620 E+++ + +L E L R+ + ES R E P P +D S + + R Sbjct: 1117 EKLRDMKKL--EKKAYLKRRYGLISTGSDSESPATRSECPSPCLQPQDLSLLQIKKPRVV 1174 Query: 621 ISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVK 671 ++ E L+ + + YP Q+ I LS QL+L +T+I +F N R ++ Sbjct: 1175 LAPEEKEALRK-AYQLEPYPSQQTIELLSFQLNLKTNTVINWFHNYRSRMR 1224 Score = 32.7 bits (73), Expect = 1.2 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 1/103 (0%) Query: 363 DIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRTASQSLLVNLRAMQNFL 422 +I QV+++L + ++ Q VF +QG +SEIL + + R + M+ FL Sbjct: 557 EIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFL 616 Query: 423 NLPE-VERDRIYQDERERSMNPNVSMVSSASSSPSSSRTPQAK 464 + + V R Q + S+ P + + S S QAK Sbjct: 617 SDEQNVLALRTIQVRQRGSITPRIRTPETGSDDAIKSILEQAK 659 >gi|39930383 BarH-like homeobox 2 [Homo sapiens] Length = 387 Score = 41.2 bits (95), Expect = 0.003 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 558 EESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDSCAKKPRS 617 + ++HHH + H Q PP Q P ++ P ++ PPPPP S A PR+ Sbjct: 80 DATQHHH--HLHHSQQPPPPAAAPTQSLQPLPQQQQPLPPQQPPPPPPQQLGSAASAPRT 137 Query: 618 RT 619 T Sbjct: 138 ST 139 >gi|157743257 POU domain, class 6, transcription factor 2 [Homo sapiens] Length = 691 Score = 41.2 bits (95), Expect = 0.003 Identities = 97/479 (20%), Positives = 179/479 (37%), Gaps = 61/479 (12%) Query: 259 NQLASLGKTNEQSPHS----QIHHSTPIRNQVPALQPIMSPG--------------LLSP 300 +QL + + PHS Q S ++ P +P SPG L++ Sbjct: 240 SQLQQAPQPQQHQPHSHSQNQNQPSPTQQSSSPPQKPSQSPGHGLPSPLTPPNPLQLVNN 299 Query: 301 QLSPQLVRQQIAMAHLINQQI---AVSRLLAHQHPQAINQQFLNHPPIPRAVKPEPTNSS 357 L+ Q AM+ + + Q A+S L N Q IP P P++ + Sbjct: 300 PLASQAAAAAAAMSSIASSQAFGNALSSLQGVTGQLVTNAQGQIIGTIPLMPNPGPSSQA 359 Query: 358 VEVSPDIYQQVRDELKRASVSQAVFARVAFNR------TQGLLSEILRKEEDPRTASQSL 411 + + Q + + A V N+ TQG+ ++ + SQ+ Sbjct: 360 ASGTQGLQVQPITPQLLTNAQGQIIATVIGNQILPVINTQGITLSPIKPGQQLHQPSQTS 419 Query: 412 LVNLRAMQNFLNLPEVERDRIYQDERERSMNPNVSMVSSASSSPSSSRTPQAKTSTPTTD 471 + + N L+L + R+ S SS+SSS SS+ + S P T Sbjct: 420 VGQAASQGNLLHLAHSQASMSQSPVRQASS-------SSSSSSSSSALSVGQLVSNPQTA 472 Query: 472 LPIKVDGANINITAAIYDEIQQEMKRAKVSQALFAKVAANKSQGWLCELLRWKENPSPEN 531 +VDG N+ +EI++ K K+ +++ +Q + + L E P+ Sbjct: 473 AG-EVDGVNL-------EEIREFAKAFKI-----RRLSLGLTQTQVGQALSATEGPAYSQ 519 Query: 532 RTLWENLCTIRRFLNLPQHERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAK 591 + + +R LPQ ++ + + + + + Q+ +P Sbjct: 520 SAICRH-TILRSHFFLPQEAQENTIASSLTAKLNPGLLYPARFEKLDITPKSAQKIKPVL 578 Query: 592 ESSPPREEAPPPPPPTE------DSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAI 645 E EA +KK + RT + +AL IL + + +P + + Sbjct: 579 ERWMAEAEARHRAGMQNLTEFIGSEPSKKRKRRTSFTPQALEILNAHF-EKNTHPSGQEM 637 Query: 646 HTLSAQLDLPKHTIIKFFQNQRYHVKHHGK-LKEHLGSAVDVAEYKDEELLTESEENDS 703 ++ +L+ + + +F N+R +K+ K LK+H + A E LT+S E +S Sbjct: 638 TEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKQH-----EPATAVPLEPLTDSLEENS 691 >gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] Length = 2790 Score = 40.8 bits (94), Expect = 0.005 Identities = 42/168 (25%), Positives = 60/168 (35%), Gaps = 41/168 (24%) Query: 589 PAKESSPPREEAPPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTL 648 P +E R PP P A + SRTK + LQSF + YP + L Sbjct: 1794 PIEEEESSRGNLPPLVP------AGRRFSRTKFTEFQTQALQSFF-ETSAYPKDGEVERL 1846 Query: 649 SAQLDLPKHTIIKFFQNQRYHVKHHG-----------------------------KLKEH 679 ++ L L ++ +FQN R + + +L H Sbjct: 1847 ASLLGLASRVVVVWFQNARQKARKNACEGGSMPTGGGTGGASGCRRCHATFSCVFELVRH 1906 Query: 680 LGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENADKSKAAP 727 L Y D+ L E EE + E EE+ + E EEE + A P Sbjct: 1907 LKKC-----YDDQTLEEEEEEAERGEEEEEVEEEEVEEEQGLEPPAGP 1949 Score = 30.4 bits (67), Expect = 6.1 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 4/31 (12%) Query: 589 PAKESSPPREEAP----PPPPPTEDSCAKKP 615 P KE++ P E P PPPPP+E+ ++P Sbjct: 2201 PGKEATTPTPEPPLPLLPPPPPSEEEGPEEP 2231 >gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens] Length = 2706 Score = 40.8 bits (94), Expect = 0.005 Identities = 42/168 (25%), Positives = 60/168 (35%), Gaps = 41/168 (24%) Query: 589 PAKESSPPREEAPPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTL 648 P +E R PP P A + SRTK + LQSF + YP + L Sbjct: 1710 PIEEEESSRGNLPPLVP------AGRRFSRTKFTEFQTQALQSFF-ETSAYPKDGEVERL 1762 Query: 649 SAQLDLPKHTIIKFFQNQRYHVKHHG-----------------------------KLKEH 679 ++ L L ++ +FQN R + + +L H Sbjct: 1763 ASLLGLASRVVVVWFQNARQKARKNACEGGSMPTGGGTGGASGCRRCHATFSCVFELVRH 1822 Query: 680 LGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENADKSKAAP 727 L Y D+ L E EE + E EE+ + E EEE + A P Sbjct: 1823 LKKC-----YDDQTLEEEEEEAERGEEEEEVEEEEVEEEQGLEPPAGP 1865 Score = 30.4 bits (67), Expect = 6.1 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 4/31 (12%) Query: 589 PAKESSPPREEAP----PPPPPTEDSCAKKP 615 P KE++ P E P PPPPP+E+ ++P Sbjct: 2117 PGKEATTPTPEPPLPLLPPPPPSEEEGPEEP 2147 >gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens] Length = 2706 Score = 40.8 bits (94), Expect = 0.005 Identities = 42/168 (25%), Positives = 60/168 (35%), Gaps = 41/168 (24%) Query: 589 PAKESSPPREEAPPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTL 648 P +E R PP P A + SRTK + LQSF + YP + L Sbjct: 1710 PIEEEESSRGNLPPLVP------AGRRFSRTKFTEFQTQALQSFF-ETSAYPKDGEVERL 1762 Query: 649 SAQLDLPKHTIIKFFQNQRYHVKHHG-----------------------------KLKEH 679 ++ L L ++ +FQN R + + +L H Sbjct: 1763 ASLLGLASRVVVVWFQNARQKARKNACEGGSMPTGGGTGGASGCRRCHATFSCVFELVRH 1822 Query: 680 LGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENADKSKAAP 727 L Y D+ L E EE + E EE+ + E EEE + A P Sbjct: 1823 LKKC-----YDDQTLEEEEEEAERGEEEEEVEEEEVEEEQGLEPPAGP 1865 Score = 30.4 bits (67), Expect = 6.1 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 4/31 (12%) Query: 589 PAKESSPPREEAP----PPPPPTEDSCAKKP 615 P KE++ P E P PPPPP+E+ ++P Sbjct: 2117 PGKEATTPTPEPPLPLLPPPPPSEEEGPEEP 2147 >gi|19718731 bromodomain-containing protein 4 isoform long [Homo sapiens] Length = 1362 Score = 40.4 bits (93), Expect = 0.006 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 11/54 (20%) Query: 557 EEESRHHHSERMQH----VVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPP 606 +++ HHH ++MQ V Q PP P Q QP P +++ PPPPPP Sbjct: 735 QKKHHHHHHQQMQQAPAPVPQQPPPPPQ-------QPPPPPPPQQQQQPPPPPP 781 Score = 37.7 bits (86), Expect = 0.038 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 2/65 (3%) Query: 558 EESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDSCAKKPRS 617 E+ +HHH Q +Q P PV Q PP+++ PPPPP S ++ Sbjct: 734 EQKKHHHHHHQQ--MQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAP 791 Query: 618 RTKIS 622 K S Sbjct: 792 AMKSS 796 Score = 33.9 bits (76), Expect = 0.55 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Query: 567 RMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDSCAKKP 615 + QH Q PP PV + Q S ++ PP+ + PP PPP + +P Sbjct: 987 QQQH--QPPPRPVHLQPMQFSTHIQQPPPPQGQQPPHPPPGQQPPPPQP 1033 Score = 32.3 bits (72), Expect = 1.6 Identities = 40/189 (21%), Positives = 73/189 (38%), Gaps = 17/189 (8%) Query: 551 ERDVIYEEESRHHHSERMQH-----VVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPP 605 E+D +++ +H E ++ + PP+ + + S +K+ P + PPP Sbjct: 540 EKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAPMKSKPPPTY 599 Query: 606 PTEDSCAKKPRS---RTKISL-------EALGILQSFIHDVGLYPDQEAIHTLSAQLDLP 655 +E+ KP S + ++SL E LG + I P + + ++D Sbjct: 600 ESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQ--SREPSLKNSNPDEIEIDFE 657 Query: 656 KHTIIKFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEA 715 + +RY K ++ VDV + S E++S S ++ Sbjct: 658 TLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESSSESSSSDSEDS 717 Query: 716 EEENADKSK 724 E E A KSK Sbjct: 718 ETEMAPKSK 726 Score = 31.2 bits (69), Expect = 3.6 Identities = 37/176 (21%), Positives = 65/176 (36%), Gaps = 23/176 (13%) Query: 249 GQRPMHLPNMNQLASLGKTNEQSP----HSQIHH-----STPIRNQVPALQPIMSPGLLS 299 GQ+P H P Q Q HS HH ST + P+ I SP + Sbjct: 1016 GQQPPHPPPGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYSTGHLREAPSPLMIHSPQMSQ 1075 Query: 300 ---------PQLSPQLVRQQIAMAHLINQQIAVSRLLAHQHPQAINQQFLNHPPIPRAVK 350 PQ + Q +Q++ A ++ Q V + I+ + P +++ Sbjct: 1076 FQSLTHQSPPQQNVQPKKQELRAASVVQPQPLVV-----VKEEKIHSPIIRSEPFSPSLR 1130 Query: 351 PEPTNSSVEVSPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRT 406 PEP + ++ R E+K V + V N + +++++P+T Sbjct: 1131 PEPPKHPESIKAPVHLPQRPEMKPVDVGRPVIRPPEQNAPPPGAPDKDKQKQEPKT 1186 Score = 30.4 bits (67), Expect = 6.1 Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 19/158 (12%) Query: 564 HSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDSCAKKPRS----RT 619 H E ++ V LP P ++ +P PP + APPP P +D ++P++ + Sbjct: 1136 HPESIKAPVHLPQRP-EMKPVDVGRPVIR--PPEQNAPPPGAPDKDKQKQEPKTPVAPKK 1192 Query: 620 KISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGKLKEH 679 + ++ +G S + P A + + F+ R + + ++ Sbjct: 1193 DLKIKNMGSWASLVQKHPTTPSSTAKSSSDS------------FEQFRRAAREKEEREKA 1240 Query: 680 LGSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEE 717 L + + AE + E L E + +E + E + EE Sbjct: 1241 LKAQAEHAEKEKERLRQERMRSREDEDALEQARRAHEE 1278 Score = 30.0 bits (66), Expect = 8.0 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Query: 545 LNLPQHERDVIYEEESRHHHSERM-QHVVQLPPEPVQVLHRQQSQPAKESS--PPREEAP 601 L+LPQ E + H + QH V PP L +Q S+P+ ++ PP+ P Sbjct: 828 LHLPQPELPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPARP 887 Query: 602 PPPPP 606 P P Sbjct: 888 PAVSP 892 Score = 30.0 bits (66), Expect = 8.0 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 8/42 (19%) Query: 575 PPEPVQVLHRQQSQPAKESSPPR--------EEAPPPPPPTE 608 PP P+ + QSQP PP ++ PPPPPP + Sbjct: 940 PPTPLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQ 981 >gi|239757043 PREDICTED: functional smad suppressing element 18 [Homo sapiens] Length = 996 Score = 40.0 bits (92), Expect = 0.008 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 562 HHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDSCAKKPRSRTKI 621 H H H PP P+ +L Q +P E P PPPPPP A+ P R + Sbjct: 659 HPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPPPPP-PPPLAQHPHHRGLL 717 Query: 622 S 622 S Sbjct: 718 S 718 Score = 38.9 bits (89), Expect = 0.017 Identities = 18/45 (40%), Positives = 20/45 (44%) Query: 562 HHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPP 606 HHH H PP+P L QP + S APPPPPP Sbjct: 656 HHHHPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPP 700 >gi|239751555 PREDICTED: functional smad suppressing element 18 [Homo sapiens] Length = 1252 Score = 40.0 bits (92), Expect = 0.008 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 562 HHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDSCAKKPRSRTKI 621 H H H PP P+ +L Q +P E P PPPPPP A+ P R + Sbjct: 659 HPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPPPPP-PPPLAQHPHHRGLL 717 Query: 622 S 622 S Sbjct: 718 S 718 Score = 38.9 bits (89), Expect = 0.017 Identities = 18/45 (40%), Positives = 20/45 (44%) Query: 562 HHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPP 606 HHH H PP+P L QP + S APPPPPP Sbjct: 656 HHHHPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPP 700 >gi|239746067 PREDICTED: functional smad suppressing element 18 [Homo sapiens] Length = 1252 Score = 40.0 bits (92), Expect = 0.008 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 562 HHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDSCAKKPRSRTKI 621 H H H PP P+ +L Q +P E P PPPPPP A+ P R + Sbjct: 659 HPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPPPPP-PPPLAQHPHHRGLL 717 Query: 622 S 622 S Sbjct: 718 S 718 Score = 38.9 bits (89), Expect = 0.017 Identities = 18/45 (40%), Positives = 20/45 (44%) Query: 562 HHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPP 606 HHH H PP+P L QP + S APPPPPP Sbjct: 656 HHHHPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPP 700 >gi|57232759 intestine-specific homeobox [Homo sapiens] Length = 245 Score = 39.3 bits (90), Expect = 0.013 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 3/90 (3%) Query: 599 EAPPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHT 658 E PP P E +K+ R RT + E L L+ H YPD L+A+++LP+ Sbjct: 68 EKPPKDQPQEGRKSKR-RVRTTFTTEQLHELEKIFHFTH-YPDVHIRSQLAARINLPEAR 125 Query: 659 IIKFFQNQRYHVKHHGKLKEHLGSAVDVAE 688 + +FQNQR + K+ +LG+ ++E Sbjct: 126 VQIWFQNQRAKWRKQEKI-GNLGAPQQLSE 154 >gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo sapiens] Length = 406 Score = 38.5 bits (88), Expect = 0.022 Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 16/129 (12%) Query: 556 YEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKES--------SPPREEAPPPPPPT 607 +E E + + Q P+ L ++Q +P + + P E P PP Sbjct: 80 HEPEQQQEEPPLTKPEQQQEEPPLLELKQEQEEPPQTTVEGPQPAEGPQTAEGPQPPE-- 137 Query: 608 EDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQR 667 +K R RT + L L++F D YPD A L+A+L+L + + +FQN+R Sbjct: 138 -----RKRRRRTAFTQFQLQELENFF-DESQYPDVVARERLAARLNLTEDRVQVWFQNRR 191 Query: 668 YHVKHHGKL 676 K + ++ Sbjct: 192 AKWKRNQRV 200 >gi|110349719 titin isoform N2-A [Homo sapiens] Length = 33423 Score = 37.7 bits (86), Expect = 0.038 Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 38/180 (21%) Query: 575 PPEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDSCAKKPRSRTKISLEALGILQSFIH 634 PP V + +++ P + PR+E PPPP + KKP K+++ Sbjct: 9395 PPPAVPEIPKKKV-PEERKPVPRKEEEVPPPPKVPALPKKPVPEEKVAV----------- 9442 Query: 635 DVGLYPDQEAIHTLSAQLDLPKHTII---KFFQNQR--YHVKHHGKLKEHLGSAVDVAEY 689 P A + ++ K T++ +F ++ + V ++ H SA + Y Sbjct: 9443 -----PVPVAKKAPPPRAEVSKKTVVEEKRFVAEEKLSFAVPQRVEVTRHEVSAEEEWSY 9497 Query: 690 KDEE------LLTESEENDSEEGSEEMYKVEAEEEN----------ADKSKAAPAEIDQR 733 +EE + E E + EE Y+V E E + + +A PAE+ +R Sbjct: 9498 SEEEEGVSISVYREEEREEEEEAEVTEYEVMEEPEEYVVEEKLHIISKRVEAEPAEVTER 9557 Score = 35.4 bits (80), Expect = 0.19 Identities = 87/382 (22%), Positives = 138/382 (36%), Gaps = 58/382 (15%) Query: 345 IPRAVKPEPTNSSVEVSPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDP 404 IP KP P VE P + R+ + V+ V F E+L +EE+ Sbjct: 10068 IPEEKKPTPVPKKVEAPPPKVPKKREPVP-VPVALPQEEEVLFEEEIVPEEEVLPEEEEV 10126 Query: 405 RTASQSLLVNLRAMQNFLNLPEVERDRIYQDERERSMNPNVSMVSSASSS-PSSSRTPQA 463 + +L + LPE E I +E E + P V P P+ Sbjct: 10127 LPEEEEVLPEEEEV-----LPEEEE--IPPEEEE--VPPEEEYVPEEEEFVPEEEVLPEV 10177 Query: 464 KTSTPTTDLPIKVDGANINITAA-IYDEIQQEMKRAKVSQALFA----KVAANKSQGWLC 518 K P +P V +T + ++E AKV + ++ K + Sbjct: 10178 KPKVP---VPAPVPEIKKKVTEKKVVIPKKEEAPPAKVPEVPKKVEEKRIILPKEE---- 10230 Query: 519 ELLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVIYEEESRHHHSERMQHVVQ--LPP 576 E+L + PE + E +P+ + EE R+ V++ +P Sbjct: 10231 EVLPVEVTEEPEEEPISEE--------EIPEEPPSI---EEVEEVAPPRVPEVIKKAVPE 10279 Query: 577 EPVQVLHRQQSQPAKESSP-PREEAPPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHD 635 P V + ++ PAK S P E+ P P E AK P K+ + + Sbjct: 10280 APTPVPKKVEAPPAKVSKKIPEEKVPVPVQKKEAPPAKVPEVPKKVPEKKV--------- 10330 Query: 636 VGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELL 695 L P +EA+ + L + + F Q +KE L ++V E + EE+ Sbjct: 10331 --LVPKKEAVPPAKGRTVLEEKVSVAFRQEV--------VVKERL--ELEVVEAEVEEIP 10378 Query: 696 TESEENDSEEGSEEMYKVEAEE 717 E E ++ EE EE E EE Sbjct: 10379 EEEEFHEVEEYFEEGEFHEVEE 10400 Score = 32.7 bits (73), Expect = 1.2 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 10/46 (21%) Query: 574 LPPEPVQVLHRQQSQPAKESSP----------PREEAPPPPPPTED 609 +P + V V+ + ++ P KE P PR PPP PP ED Sbjct: 10847 IPEKKVPVIKKPEAPPPKEPEPEKVIEKPKLKPRPPPPPPAPPKED 10892 Score = 32.3 bits (72), Expect = 1.6 Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 14/169 (8%) Query: 575 PPEPVQVLHRQQSQPAK-------ESSPPREEAPPPPPPTEDSCAKKPRSRTKISLEALG 627 PP+ ++V + + AK E +P E PPPPT AK P S Sbjct: 8978 PPKRIEVTKKAVKKDAKKVVAKPKEMTPREEIVKKPPPPTTLIPAKAPEIIDVSSKAEEV 9037 Query: 628 ILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQN-------QRYHVKHHGKLKEHL 680 + + + ++EA++ + K I+ F+ + Y E Sbjct: 9038 KIMTITRKKEVQKEKEAVYEKKQAVHKEKRVFIESFEEPYDELEVEPYTEPFEQPYYEEP 9097 Query: 681 GSAVDVAEYKDEELLTESEENDSEEGSEEMYKVEAEEENADKSKAAPAE 729 + + + ++ + E E D EEG E + E +E ++ + A E Sbjct: 9098 DEDYEEIKVEAKKEVHEEWEEDFEEGQEYYEREEGYDEGEEEWEEAYQE 9146 >gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo sapiens] Length = 2168 Score = 37.0 bits (84), Expect = 0.065 Identities = 77/393 (19%), Positives = 149/393 (37%), Gaps = 51/393 (12%) Query: 352 EPTNSSVEVSPDIYQQVRDELKRASVSQAVFARVAFNRTQGLLSEILRKEEDPRT----- 406 E + S+E S D E + S +Q + ++ + G + K ++ R Sbjct: 273 EEEDQSIEESEDDDSDSESEAQHKSNNQVLLHGISDPKADG--QKATEKAQEKRIHQPLP 330 Query: 407 -ASQSLLVNLRAMQNFLNLPEVERDRIYQDE--RERSMNPNVSMVSSA---SSSPSSSRT 460 AS+S + ++ Q + + I+Q +E S+N + S++ S S+ S Sbjct: 331 LASESQTHSFQSQQKQPQVLSQQLPFIFQSSQAKEESVNKHTSVIQSTGLVSNVKPLSLV 390 Query: 461 PQAKTST------PTTDLPIKVDGANINITAAIYDEIQQEMKRAKVSQALFAKVAANKSQ 514 QAK T P+ D+ +K N + +++ + KR + QA +++ +S Sbjct: 391 NQAKKETYMKLIVPSPDV-LKAGNKNTSEESSLLTS-ELRSKREQYKQAFPSQLKKQESS 448 Query: 515 GWLCELLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVIYEEESRHHHSERMQHVVQL 574 L +++ NP + + T+ P ++ H + +Q V+Q Sbjct: 449 KSLKKVIAALSNPKATSSSPAHPKQTLENNHPNPFLTNALL----GNHQPNGVIQSVIQE 504 Query: 575 PPEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDSCAKKPRSRTKISLEALGILQSFIH 634 P + + QS+ + + P S + P ++T + A IL S Sbjct: 505 APLALTTKTKMQSKINENIAAASSTPFSSPVNLSTSGRRTPGNQTPVMPSASPILHSQGK 564 Query: 635 DVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGK--LKEHLGSAVDVAEYKDE 692 + + + + T H H K +++ G+ D+ KD Sbjct: 565 EKAVSNNVNPVKT--------------------QHHSHPAKSLVEQFRGTDSDIPSSKDS 604 Query: 693 ELLTESEENDSEEGSEEMYKVEAEEENADKSKA 725 E E EE D EE EE + E++ +D S++ Sbjct: 605 EDSNEDEEEDDEEEDEE----DDEDDESDDSQS 633 >gi|7657116 glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Homo sapiens] Length = 408 Score = 36.6 bits (83), Expect = 0.085 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 575 PPEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDSCAKKPRSRTKISLE 624 PPEP + + QP E +P REE PPPPP A P ++ E Sbjct: 29 PPEPKAEV---EPQPQPEPTPVREEIKPPPPPLPPHPATPPPKMVSVARE 75 >gi|41152235 ubiquitin specific protease 51 [Homo sapiens] Length = 711 Score = 36.6 bits (83), Expect = 0.085 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Query: 576 PEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDSCAKKPRS 617 P P Q R +SQP + PP PPPPPP A +PR+ Sbjct: 106 PRP-QPRARSRSQPGLSAPPPPPARPPPPPPPPPPPAPRPRA 146 >gi|46249382 paired-like homeobox 2a [Homo sapiens] Length = 284 Score = 36.2 bits (82), Expect = 0.11 Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 588 QPAKESSPPREEAPPPPPPTEDSCAKKPRSRTKISLEALGILQSFIHDVGLYPDQEAIHT 647 QPA S+ P + P P E K+ R RT + L L+ + YPD Sbjct: 66 QPAPYSAVPYKFFPEPSGLHEKR--KQRRIRTTFTSAQLKELERVFAETH-YPDIYTREE 122 Query: 648 LSAQLDLPKHTIIKFFQNQRYHVKHHGKLKEHLGSAVDVAEYKDEELLTESEENDSEEGS 707 L+ ++DL + + +FQN+R + + G+A A K E SE++DS+E + Sbjct: 123 LALKIDLTEARVQVWFQNRRAKFRKQERAASAKGAA-GAAGAKKGEARCSSEDDDSKEST 181 >gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1 [Homo sapiens] Length = 491 Score = 35.8 bits (81), Expect = 0.15 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 551 ERDVIYEEESRHHHSERMQHVVQLPPEPVQVLHRQQSQPAKE-SSPPREEAPPPPPP 606 ER ++ ++ H QH++ PP V H +QP ++ +PP E + PPPP Sbjct: 218 ERFIMPPDKHHMSHIPPKQHIMMPPPPLQHVPHEHYNQPHEDIRAPPAELSMAPPPP 274 Score = 31.2 bits (69), Expect = 3.6 Identities = 14/45 (31%), Positives = 17/45 (37%) Query: 562 HHHSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPP 606 HH QH PP P + H P +P + PPPP Sbjct: 332 HHIMPPQQHYAPPPPPPPPISHPMPHPPQAAGTPHLVYSQAPPPP 376 >gi|210032580 SET domain containing 1B [Homo sapiens] Length = 1923 Score = 35.8 bits (81), Expect = 0.15 Identities = 15/42 (35%), Positives = 22/42 (52%) Query: 569 QHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPPPPTEDS 610 +H +++ PEP +L P PPR +PPP P T D+ Sbjct: 1261 EHDLEVEPEPPMMLPLPLQPPLPPPRPPRPPSPPPEPETTDA 1302 >gi|156415988 zinc finger and BTB domain containing 7B [Homo sapiens] Length = 539 Score = 35.4 bits (80), Expect = 0.19 Identities = 16/39 (41%), Positives = 20/39 (51%) Query: 589 PAKESSPPREEAPPPPPPTEDSCAKKPRSRTKISLEALG 627 P E SPP+ PPPPPP A++ R K L+ G Sbjct: 175 PNGEDSPPQVPLPPPPPPPPRPVARRSRKPRKAFLQTKG 213 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.313 0.128 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,464,044 Number of Sequences: 37866 Number of extensions: 1560313 Number of successful extensions: 15444 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 171 Number of HSP's that attempted gapping in prelim test: 13564 Number of HSP's gapped (non-prelim): 1705 length of query: 733 length of database: 18,247,518 effective HSP length: 110 effective length of query: 623 effective length of database: 14,082,258 effective search space: 8773246734 effective search space used: 8773246734 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.