Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ADH1B Sequence: fasta or formatted (375aa) NCBI GI: 34577061
Description:

class I alcohol dehydrogenase, beta subunit

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         31           2
 C cysteine            4.0         15           2
 D aspartate           4.5         17           2
 E glutamate           5.1         19           1
 F phenylalanine       4.3         16           1
 G glycine            10.1         38           2
 H histidine           2.1          8           2
 I isoleucine          5.9         22           2
 K lysine              8.5         32           2
 L leucine             7.7         29           3
 M methionine          2.1          8           2
 N asparagine          3.2         12           1
 P proline             5.3         20           2
 Q glutamine           1.6          6           1
 R arginine            2.7         10           2
 S serine              5.6         21           1
 T threonine           6.4         24           2
 V valine             10.4         39           2
 W tryptophan          0.5          2           1
 Y tyrosine            1.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   class I alcohol dehydrogenase, beta subunit 
ADH1C                 0.952   class I alcohol dehydrogenase, gamma subunit 
ADH1A                 0.940   class I alcohol dehydrogenase, alpha subunit 
ADH7                  0.719   class IV alcohol dehydrogenase, mu or sigma subunit ...
ADH5                  0.640   class III alcohol dehydrogenase, chi subunit 
ADH6                  0.628   class V alcohol dehydrogenase isoform 1 
ADH6                  0.620   class V alcohol dehydrogenase isoform 2 
ADH4                  0.603   class II alcohol dehydrogenase, pi subunit 
SORD                  0.092   sorbitol dehydrogenase 
CRYZ                  0.048   crystallin, zeta isoform a 
CRYZ                  0.048   crystallin, zeta isoform a 
MECR                  0.046   trans-2-enoyl-CoA reductase, mitochondrial isoform a...
CRYZ                  0.035   crystallin, zeta isoform b 
VAT1                  0.033   vesicle amine transport protein 1 
MECR                  0.029   trans-2-enoyl-CoA reductase, mitochondrial isoform b...
ZADH2                 0.026   zinc binding alcohol dehydrogenase domain containing...
VAT1L                 0.024   vesicle amine transport protein 1 homolog (T. califo...
FASN                  0.016   fatty acid synthase 
TP53I3                0.016   tumor protein p53 inducible protein 3 
TP53I3                0.016   tumor protein p53 inducible protein 3 
CRYZL1                0.014   crystallin, zeta-like 1 
LOC100129053          0.010   PREDICTED: hypothetical protein 
LOC100129053          0.010   PREDICTED: hypothetical protein 
LOC100129053          0.010   PREDICTED: hypothetical protein 
PTGR1                 0.007   prostaglandin reductase 1 isoform 1 
PTGR1                 0.007   prostaglandin reductase 1 isoform 1 
PTGR1                 0.007   prostaglandin reductase 1 isoform 2 
NUPL1                 0.007   nucleoporin like 1 isoform b 
NUPL1                 0.007   nucleoporin like 1 isoform a 
GALNTL6               0.005   N-acetylgalactosaminyltransferase-like 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press