Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CRYZ Sequence: fasta or formatted (295aa) NCBI GI: 194239676
Description:

crystallin, zeta isoform b

Referenced in:

Crystallins and Other Eye Proteins

Other entries for this name:
alt prot [329aa] crystallin, zeta isoform a
alt prot [329aa] crystallin, zeta isoform a
alt prot [192aa] crystallin, zeta isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.2         33           3
 C cysteine            1.0          3           1
 D aspartate           3.1          9           1
 E glutamate           6.4         19           2
 F phenylalanine       3.1          9           1
 G glycine            10.8         32           2
 H histidine           3.1          9           1
 I isoleucine          7.8         23           2
 K lysine              6.8         20           2
 L leucine             7.5         22           3
 M methionine          1.7          5           1
 N asparagine          2.4          7           1
 P proline             4.1         12           1
 Q glutamine           3.4         10           2
 R arginine            3.7         11           1
 S serine              6.1         18           2
 T threonine           5.1         15           1
 V valine              8.5         25           2
 W tryptophan          0.3          1           1
 Y tyrosine            4.1         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   crystallin, zeta isoform b 
CRYZ                  0.970   crystallin, zeta isoform a 
CRYZ                  0.970   crystallin, zeta isoform a 
CRYZ                  0.468   crystallin, zeta isoform c 
VAT1                  0.188   vesicle amine transport protein 1 
VAT1L                 0.170   vesicle amine transport protein 1 homolog (T. califo...
TP53I3                0.116   tumor protein p53 inducible protein 3 
TP53I3                0.116   tumor protein p53 inducible protein 3 
RTN4IP1               0.115   reticulon 4 interacting protein 1 precursor 
MECR                  0.097   trans-2-enoyl-CoA reductase, mitochondrial isoform a...
MECR                  0.088   trans-2-enoyl-CoA reductase, mitochondrial isoform b...
CRYZL1                0.072   crystallin, zeta-like 1 
ZADH2                 0.066   zinc binding alcohol dehydrogenase domain containing...
PTGR1                 0.063   prostaglandin reductase 1 isoform 1 
PTGR1                 0.063   prostaglandin reductase 1 isoform 1 
PTGR1                 0.063   prostaglandin reductase 1 isoform 2 
FASN                  0.059   fatty acid synthase 
ADH1A                 0.052   class I alcohol dehydrogenase, alpha subunit 
ADH7                  0.047   class IV alcohol dehydrogenase, mu or sigma subunit ...
ADH1B                 0.047   class I alcohol dehydrogenase, beta subunit 
ADH6                  0.047   class V alcohol dehydrogenase isoform 1 
ADH6                  0.047   class V alcohol dehydrogenase isoform 2 
ADH5                  0.047   class III alcohol dehydrogenase, chi subunit 
ADH1C                 0.043   class I alcohol dehydrogenase, gamma subunit 
SORD                  0.041   sorbitol dehydrogenase 
ADH4                  0.029   class II alcohol dehydrogenase, pi subunit 
SDR16C5               0.011   epidermal retinal dehydrogenase 2 
DHRS11                0.011   short-chain dehydrogenase/reductase 
KRT17                 0.007   keratin 17 
HSD17B8               0.005   estradiol 17 beta-dehydrogenase 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press