Guide to the Human Genome
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Name: GALNTL6 Sequence: fasta or formatted (601aa) NCBI GI: 194018457
Description:

N-acetylgalactosaminyltransferase-like 6

Referenced in:

Gene Structure
Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         34           2
 C cysteine            2.2         13           1
 D aspartate           5.8         35           2
 E glutamate           7.3         44           2
 F phenylalanine       4.8         29           1
 G glycine             6.5         39           2
 H histidine           4.0         24           2
 I isoleucine          5.7         34           3
 K lysine              6.3         38           2
 L leucine             8.3         50           2
 M methionine          3.0         18           1
 N asparagine          4.0         24           2
 P proline             5.8         35           3
 Q glutamine           2.8         17           2
 R arginine            6.7         40           2
 S serine              5.5         33           1
 T threonine           4.2         25           1
 V valine              4.8         29           1
 W tryptophan          3.0         18           1
 Y tyrosine            3.7         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   N-acetylgalactosaminyltransferase-like 6 
GALNT10               0.728   GalNAc transferase 10 isoform a 
GALNT10               0.318   GalNAc transferase 10 isoform b 
GALNT1                0.308   polypeptide N-acetylgalactosaminyltransferase 1 [Hom...
GALNT13               0.306   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT7                0.295   polypeptide N-acetylgalactosaminyltransferase 7 [Ho...
GALNT5                0.287   N-acetylgalactosaminyltransferase 5 
GALNT4                0.275   polypeptide N-acetylgalactosaminyltransferase 4 [Hom...
GALNTL1               0.275   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNT11               0.271   N-acetylgalactosaminyltransferase 11 
GALNT12               0.263   N-acetylgalactosaminyltransferase 12 
GALNT14               0.250   N-acetylgalactosaminyltransferase 14 
GALNT3                0.246   polypeptide N-acetylgalactosaminyltransferase 3 [Ho...
GALNT6                0.244   polypeptide N-acetylgalactosaminyltransferase 6 [Ho...
GALNT2                0.242   polypeptide N-acetylgalactosaminyltransferase 2 [Homo...
GALNTL2               0.238   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNTL5               0.215   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
WBSCR17               0.213   UDP-GalNAc:polypeptide N-acetylgalactosaminyltransfe...
GALNTL4               0.193   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT9                0.192   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT8                0.168   polypeptide N-acetylgalactosaminyltransferase 8 [Homo...
GALNT9                0.034   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
TCEAL6                0.006   transcription elongation factor A (SII)-like 6 [Hom...
ADH1C                 0.005   class I alcohol dehydrogenase, gamma subunit 
CSGALNACT2            0.005   chondroitin sulfate N-acetylgalactosaminyltransferas...
ZNF763                0.004   zinc finger protein 440 like 
ADH1A                 0.004   class I alcohol dehydrogenase, alpha subunit 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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