Guide to the Human Genome
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Name: ADH7 Sequence: fasta or formatted (386aa) NCBI GI: 71743840
Description:

class IV alcohol dehydrogenase, mu or sigma subunit

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         23           2
 C cysteine            3.6         14           1
 D aspartate           5.2         20           2
 E glutamate           5.7         22           2
 F phenylalanine       4.7         18           1
 G glycine            10.1         39           2
 H histidine           1.8          7           2
 I isoleucine          7.3         28           2
 K lysine              8.5         33           2
 L leucine             6.5         25           2
 M methionine          2.8         11           1
 N asparagine          2.3          9           2
 P proline             4.9         19           2
 Q glutamine           1.8          7           1
 R arginine            3.1         12           1
 S serine              6.0         23           2
 T threonine           8.3         32           2
 V valine              9.6         37           3
 W tryptophan          0.5          2           1
 Y tyrosine            1.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   class IV alcohol dehydrogenase, mu or sigma subunit ... 
ADH1B                 0.700   class I alcohol dehydrogenase, beta subunit 
ADH1C                 0.697   class I alcohol dehydrogenase, gamma subunit 
ADH1A                 0.689   class I alcohol dehydrogenase, alpha subunit 
ADH6                  0.581   class V alcohol dehydrogenase isoform 1 
ADH5                  0.579   class III alcohol dehydrogenase, chi subunit 
ADH6                  0.573   class V alcohol dehydrogenase isoform 2 
ADH4                  0.552   class II alcohol dehydrogenase, pi subunit 
SORD                  0.083   sorbitol dehydrogenase 
CRYZ                  0.036   crystallin, zeta isoform a 
CRYZ                  0.036   crystallin, zeta isoform a 
CRYZ                  0.034   crystallin, zeta isoform b 
MECR                  0.032   trans-2-enoyl-CoA reductase, mitochondrial isoform a...
ZADH2                 0.021   zinc binding alcohol dehydrogenase domain containing...
VAT1L                 0.019   vesicle amine transport protein 1 homolog (T. califo...
MECR                  0.016   trans-2-enoyl-CoA reductase, mitochondrial isoform b...
VAT1                  0.013   vesicle amine transport protein 1 
FASN                  0.011   fatty acid synthase 
EHHADH                0.011   enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A...
CRYZL1                0.009   crystallin, zeta-like 1 
NUPL1                 0.007   nucleoporin like 1 isoform b 
NUPL1                 0.007   nucleoporin like 1 isoform a 
GDE1                  0.007   glycerophosphodiester phosphodiesterase 1 
IFT88                 0.007   intraflagellar transport 88 homolog isoform 1 
IFT88                 0.007   intraflagellar transport 88 homolog isoform 2 
RTN4IP1               0.007   reticulon 4 interacting protein 1 precursor 
SOCS6                 0.007   suppressor of cytokine signaling 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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