Guide to the Human Genome
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Name: ADH5 Sequence: fasta or formatted (374aa) NCBI GI: 71565154
Description:

class III alcohol dehydrogenase, chi subunit

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         34           2
 C cysteine            4.0         15           1
 D aspartate           3.7         14           1
 E glutamate           7.0         26           2
 F phenylalanine       3.7         14           1
 G glycine            10.7         40           2
 H histidine           1.9          7           1
 I isoleucine          7.5         28           2
 K lysine              8.6         32           2
 L leucine             5.9         22           2
 M methionine          2.1          8           1
 N asparagine          2.4          9           1
 P proline             4.3         16           2
 Q glutamine           1.6          6           1
 R arginine            2.4          9           1
 S serine              5.6         21           1
 T threonine           6.1         23           1
 V valine             10.4         39           3
 W tryptophan          1.1          4           1
 Y tyrosine            1.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   class III alcohol dehydrogenase, chi subunit 
ADH1B                 0.643   class I alcohol dehydrogenase, beta subunit 
ADH1A                 0.639   class I alcohol dehydrogenase, alpha subunit 
ADH1C                 0.633   class I alcohol dehydrogenase, gamma subunit 
ADH4                  0.633   class II alcohol dehydrogenase, pi subunit 
ADH6                  0.600   class V alcohol dehydrogenase isoform 1 
ADH7                  0.598   class IV alcohol dehydrogenase, mu or sigma subunit ...
ADH6                  0.594   class V alcohol dehydrogenase isoform 2 
SORD                  0.078   sorbitol dehydrogenase 
CRYZ                  0.045   crystallin, zeta isoform a 
CRYZ                  0.045   crystallin, zeta isoform a 
MECR                  0.037   trans-2-enoyl-CoA reductase, mitochondrial isoform a...
CRYZ                  0.036   crystallin, zeta isoform b 
TP53I3                0.027   tumor protein p53 inducible protein 3 
TP53I3                0.027   tumor protein p53 inducible protein 3 
VAT1                  0.023   vesicle amine transport protein 1 
MECR                  0.020   trans-2-enoyl-CoA reductase, mitochondrial isoform b...
ZADH2                 0.019   zinc binding alcohol dehydrogenase domain containing...
ITGB6                 0.015   integrin, beta 6 
CRYZL1                0.010   crystallin, zeta-like 1 
VAT1L                 0.008   vesicle amine transport protein 1 homolog (T. califo...
EHHADH                0.008   enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A...
SIRPD                 0.007   signal-regulatory protein delta 
NUPL1                 0.005   nucleoporin like 1 isoform b 
NUPL1                 0.005   nucleoporin like 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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