Guide to the Human Genome
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Name: ADH4 Sequence: fasta or formatted (380aa) NCBI GI: 71565152
Description:

class II alcohol dehydrogenase, pi subunit

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         35           2
 C cysteine            4.2         16           1
 D aspartate           5.3         20           3
 E glutamate           4.5         17           2
 F phenylalanine       5.0         19           2
 G glycine            10.3         39           2
 H histidine           1.6          6           1
 I isoleucine          8.2         31           2
 K lysine              8.7         33           2
 L leucine             7.9         30           2
 M methionine          1.3          5           1
 N asparagine          3.4         13           2
 P proline             4.5         17           2
 Q glutamine           1.6          6           2
 R arginine            2.1          8           1
 S serine              6.1         23           1
 T threonine           7.1         27           2
 V valine              7.1         27           2
 W tryptophan          0.8          3           1
 Y tyrosine            1.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   class II alcohol dehydrogenase, pi subunit 
ADH5                  0.621   class III alcohol dehydrogenase, chi subunit 
ADH1B                 0.596   class I alcohol dehydrogenase, beta subunit 
ADH1A                 0.585   class I alcohol dehydrogenase, alpha subunit 
ADH1C                 0.584   class I alcohol dehydrogenase, gamma subunit 
ADH6                  0.568   class V alcohol dehydrogenase isoform 1 
ADH7                  0.560   class IV alcohol dehydrogenase, mu or sigma subunit ...
ADH6                  0.560   class V alcohol dehydrogenase isoform 2 
SORD                  0.090   sorbitol dehydrogenase 
MECR                  0.032   trans-2-enoyl-CoA reductase, mitochondrial isoform a...
CRYZ                  0.023   crystallin, zeta isoform a 
CRYZ                  0.023   crystallin, zeta isoform a 
VAT1                  0.023   vesicle amine transport protein 1 
TP53I3                0.021   tumor protein p53 inducible protein 3 
TP53I3                0.021   tumor protein p53 inducible protein 3 
CRYZ                  0.021   crystallin, zeta isoform b 
FASN                  0.017   fatty acid synthase 
MECR                  0.017   trans-2-enoyl-CoA reductase, mitochondrial isoform b...
RTN4IP1               0.017   reticulon 4 interacting protein 1 precursor 
VAT1L                 0.011   vesicle amine transport protein 1 homolog (T. califo...
NUPL1                 0.008   nucleoporin like 1 isoform b 
NUPL1                 0.008   nucleoporin like 1 isoform a 
CRYZL1                0.007   crystallin, zeta-like 1 
HSD17B10              0.007   hydroxysteroid (17-beta) dehydrogenase 10 isoform 2 ...
HSD17B10              0.007   hydroxysteroid (17-beta) dehydrogenase 10 isoform 1 [...
HEPACAM2              0.005   HEPACAM family member 2 isoform 2 
HEPACAM2              0.005   HEPACAM family member 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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