Guide to the Human Genome
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Name: SORD Sequence: fasta or formatted (357aa) NCBI GI: 156627571
Description:

sorbitol dehydrogenase

Referenced in:

Alcohol and Aldehyde Dehydrogenases
Hexokinases and Initial Sugar Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         31           4
 C cysteine            3.1         11           1
 D aspartate           3.4         12           2
 E glutamate           6.7         24           2
 F phenylalanine       3.1         11           2
 G glycine             9.8         35           2
 H histidine           2.8         10           1
 I isoleucine          5.3         19           1
 K lysine              6.7         24           2
 L leucine             9.5         34           2
 M methionine          2.5          9           1
 N asparagine          3.9         14           2
 P proline             6.7         24           2
 Q glutamine           1.7          6           1
 R arginine            4.2         15           2
 S serine              5.6         20           2
 T threonine           4.2         15           2
 V valine              9.2         33           3
 W tryptophan          0.6          2           1
 Y tyrosine            2.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sorbitol dehydrogenase 
ADH1A                 0.107   class I alcohol dehydrogenase, alpha subunit 
ADH1C                 0.099   class I alcohol dehydrogenase, gamma subunit 
ADH1B                 0.097   class I alcohol dehydrogenase, beta subunit 
ADH4                  0.096   class II alcohol dehydrogenase, pi subunit 
ADH7                  0.090   class IV alcohol dehydrogenase, mu or sigma subunit ...
ADH5                  0.082   class III alcohol dehydrogenase, chi subunit 
ADH6                  0.077   class V alcohol dehydrogenase isoform 1 
ADH6                  0.074   class V alcohol dehydrogenase isoform 2 
CRYZ                  0.053   crystallin, zeta isoform a 
CRYZ                  0.053   crystallin, zeta isoform a 
VAT1                  0.036   vesicle amine transport protein 1 
VAT1L                 0.033   vesicle amine transport protein 1 homolog (T. califo...
CRYZ                  0.033   crystallin, zeta isoform b 
RTN4IP1               0.033   reticulon 4 interacting protein 1 precursor 
ZADH2                 0.027   zinc binding alcohol dehydrogenase domain containing...
MECR                  0.020   trans-2-enoyl-CoA reductase, mitochondrial isoform a...
CRYZ                  0.020   crystallin, zeta isoform c 
TP53I3                0.017   tumor protein p53 inducible protein 3 
TP53I3                0.017   tumor protein p53 inducible protein 3 
NNT                   0.011   nicotinamide nucleotide transhydrogenase 
NNT                   0.011   nicotinamide nucleotide transhydrogenase 
LOC100294431          0.007   PREDICTED: hypothetical protein 
MECR                  0.007   trans-2-enoyl-CoA reductase, mitochondrial isoform b...
PYCR1                 0.007   pyrroline-5-carboxylate reductase 1 isoform 1 
PYCR1                 0.007   pyrroline-5-carboxylate reductase 1 isoform 2 
ANKRD17               0.007   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.007   ankyrin repeat domain protein 17 isoform b 
ROBO1                 0.006   roundabout 1 isoform d 
ROBO1                 0.006   roundabout 1 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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