Guide to the Human Genome
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Name: ADH1C Sequence: fasta or formatted (375aa) NCBI GI: 4501933
Description:

class I alcohol dehydrogenase, gamma subunit

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         30           2
 C cysteine            4.0         15           2
 D aspartate           4.3         16           1
 E glutamate           5.6         21           2
 F phenylalanine       4.5         17           1
 G glycine             9.9         37           2
 H histidine           1.6          6           2
 I isoleucine          6.4         24           2
 K lysine              8.8         33           2
 L leucine             7.7         29           3
 M methionine          2.1          8           2
 N asparagine          3.2         12           1
 P proline             5.3         20           2
 Q glutamine           1.6          6           1
 R arginine            2.9         11           2
 S serine              6.4         24           1
 T threonine           5.9         22           2
 V valine             10.1         38           2
 W tryptophan          0.5          2           1
 Y tyrosine            1.1          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   class I alcohol dehydrogenase, gamma subunit 
ADH1B                 0.960   class I alcohol dehydrogenase, beta subunit 
ADH1A                 0.938   class I alcohol dehydrogenase, alpha subunit 
ADH7                  0.722   class IV alcohol dehydrogenase, mu or sigma subunit ...
ADH5                  0.634   class III alcohol dehydrogenase, chi subunit 
ADH6                  0.623   class V alcohol dehydrogenase isoform 1 
ADH6                  0.616   class V alcohol dehydrogenase isoform 2 
ADH4                  0.596   class II alcohol dehydrogenase, pi subunit 
SORD                  0.095   sorbitol dehydrogenase 
MECR                  0.052   trans-2-enoyl-CoA reductase, mitochondrial isoform a...
CRYZ                  0.044   crystallin, zeta isoform a 
CRYZ                  0.044   crystallin, zeta isoform a 
MECR                  0.034   trans-2-enoyl-CoA reductase, mitochondrial isoform b...
CRYZ                  0.033   crystallin, zeta isoform b 
VAT1                  0.032   vesicle amine transport protein 1 
ZADH2                 0.025   zinc binding alcohol dehydrogenase domain containing...
VAT1L                 0.023   vesicle amine transport protein 1 homolog (T. califo...
FASN                  0.019   fatty acid synthase 
CRYZL1                0.016   crystallin, zeta-like 1 
TP53I3                0.015   tumor protein p53 inducible protein 3 
TP53I3                0.015   tumor protein p53 inducible protein 3 
RTN4IP1               0.010   reticulon 4 interacting protein 1 precursor 
PTGR1                 0.008   prostaglandin reductase 1 isoform 1 
PTGR1                 0.008   prostaglandin reductase 1 isoform 1 
PTGR1                 0.008   prostaglandin reductase 1 isoform 2 
GALNTL6               0.008   N-acetylgalactosaminyltransferase-like 6 
TRMT61B               0.005   tRNA methyltransferase 61 homolog B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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