NUPL1 25162

Name: NUPL1	Sequence: fasta or formatted (599aa)		NCBI GI: 30102928
Description: nucleoporin like 1 isoform a		Referenced in: Nucleus and Nucleolus
Other entries for this name: alt prot [587aa] nucleoporin like 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.0 60 3 C cysteine 0.3 2 1 D aspartate 2.0 12 1 E glutamate 3.3 20 2 F phenylalanine 5.3 32 1 G glycine 13.4 80 2 H histidine 0.7 4 1 I isoleucine 3.0 18 1 K lysine 4.8 29 2 L leucine 9.5 57 2 M methionine 1.3 8 1 N asparagine 4.7 28 2 P proline 4.8 29 2 Q glutamine 6.0 36 4 R arginine 2.0 12 2 S serine 11.2 67 4 T threonine 13.2 79 4 V valine 3.2 19 1 W tryptophan 0.2 1 1 Y tyrosine 1.0 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nucleoporin like 1 isoform a NUPL1 0.973 nucleoporin like 1 isoform b NUP62 0.046 nucleoporin 62kDa NUP62 0.046 nucleoporin 62kDa NUP62 0.046 nucleoporin 62kDa NUP62 0.046 nucleoporin 62kDa MUC21 0.038 mucin 21 TRO 0.038 trophinin isoform 5 POM121 0.035 nuclear pore membrane protein 121 LOC100288540 0.034 PREDICTED: hypothetical protein XP_002342775 POM121C 0.032 POM121 membrane glycoprotein (rat)-like LOC729792 0.032 PREDICTED: hypothetical protein LOC100294136 0.032 PREDICTED: hypothetical protein LOC100294091 0.032 PREDICTED: hypothetical protein MUC5AC 0.032 mucin 5AC MUC5B 0.032 mucin 5, subtype B, tracheobronchial LOC100293409 0.030 PREDICTED: similar to Mucin-19 LOC100291118 0.030 PREDICTED: hypothetical protein XP_002347351 LOC100294501 0.030 PREDICTED: hypothetical protein LOC100294249 0.030 PREDICTED: hypothetical protein XP_002344067 LOC100294236 0.030 PREDICTED: similar to diffuse panbronchiolitis crit... LOC729792 0.029 PREDICTED: hypothetical protein LOC100287737 0.029 PREDICTED: hypothetical protein XP_002343203 LOC729792 0.029 PREDICTED: hypothetical protein LOC100294238 0.029 PREDICTED: hypothetical protein LOC100294204 0.029 PREDICTED: hypothetical protein LOC730401 0.029 PREDICTED: hypothetical protein NUP98 0.029 nucleoporin 98kD isoform 4 NUP98 0.029 nucleoporin 98kD isoform 3 NUP98 0.029 nucleoporin 98kD isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.