Guide to the Human Genome
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Name: ADH6 Sequence: fasta or formatted (375aa) NCBI GI: 156523966
Description:

class V alcohol dehydrogenase isoform 1

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Other entries for this name:
alt prot [368aa] class V alcohol dehydrogenase isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         30           3
 C cysteine            4.8         18           1
 D aspartate           3.5         13           1
 E glutamate           5.9         22           2
 F phenylalanine       4.5         17           2
 G glycine            10.1         38           2
 H histidine           1.3          5           1
 I isoleucine          6.9         26           2
 K lysine              8.5         32           2
 L leucine             9.6         36           3
 M methionine          1.9          7           1
 N asparagine          2.9         11           1
 P proline             3.7         14           2
 Q glutamine           2.9         11           1
 R arginine            1.9          7           1
 S serine              6.7         25           1
 T threonine           6.1         23           2
 V valine              8.8         33           3
 W tryptophan          0.5          2           1
 Y tyrosine            1.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   class V alcohol dehydrogenase isoform 1 
ADH6                  0.977   class V alcohol dehydrogenase isoform 2 
ADH1B                 0.635   class I alcohol dehydrogenase, beta subunit 
ADH1A                 0.630   class I alcohol dehydrogenase, alpha subunit 
ADH1C                 0.626   class I alcohol dehydrogenase, gamma subunit 
ADH5                  0.604   class III alcohol dehydrogenase, chi subunit 
ADH7                  0.604   class IV alcohol dehydrogenase, mu or sigma subunit ...
ADH4                  0.582   class II alcohol dehydrogenase, pi subunit 
SORD                  0.074   sorbitol dehydrogenase 
CRYZ                  0.044   crystallin, zeta isoform a 
CRYZ                  0.044   crystallin, zeta isoform a 
CRYZ                  0.036   crystallin, zeta isoform b 
MECR                  0.022   trans-2-enoyl-CoA reductase, mitochondrial isoform a...
VAT1                  0.019   vesicle amine transport protein 1 
LOC100289079          0.014   PREDICTED: hypothetical protein XP_002344489 
FASN                  0.011   fatty acid synthase 
MACF1                 0.011   microfilament and actin filament cross-linker protei...
TP53I3                0.011   tumor protein p53 inducible protein 3 
TP53I3                0.011   tumor protein p53 inducible protein 3 
VAT1L                 0.011   vesicle amine transport protein 1 homolog (T. califo...
EHHADH                0.010   enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A...
PFKP                  0.007   phosphofructokinase, platelet 
KHDRBS3               0.007   KH domain containing, RNA binding, signal transductio...
C8orf80               0.007   hypothetical protein LOC389643 
MECR                  0.007   trans-2-enoyl-CoA reductase, mitochondrial isoform b...
CRYZL1                0.007   crystallin, zeta-like 1 
ITGB6                 0.006   integrin, beta 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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