LOC653888 36772

Name: LOC653888	Sequence: fasta or formatted (370aa)		NCBI GI: 89026256
Description: PREDICTED: similar to actin related protein 2/3 complex subunit 1B		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 33 3 C cysteine 3.5 13 1 D aspartate 4.9 18 1 E glutamate 4.6 17 2 F phenylalanine 3.8 14 1 G glycine 7.6 28 2 H histidine 2.7 10 1 I isoleucine 4.6 17 1 K lysine 7.0 26 2 L leucine 7.0 26 2 M methionine 2.2 8 1 N asparagine 3.8 14 2 P proline 3.5 13 1 Q glutamine 2.2 8 1 R arginine 5.7 21 3 S serine 10.3 38 4 T threonine 5.4 20 2 V valine 7.3 27 1 W tryptophan 3.5 13 2 Y tyrosine 1.6 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to actin related protein 2/3 comp... ARPC1B 0.957 actin related protein 2/3 complex subunit 1B ARPC1A 0.667 actin related protein 2/3 complex subunit 1A CIAO1 0.051 WD repeat domain 39 TBL1XR1 0.043 transducin (beta)-like 1 X-linked receptor 1 TBL1X 0.038 transducin beta-like 1X isoform b TBL1X 0.038 transducin beta-like 1X isoform b TBL1X 0.038 transducin beta-like 1X isoform a TBL1X 0.038 transducin beta-like 1X isoform a SEC13 0.036 SEC13 protein isoform 2 SEC13 0.036 SEC13 protein isoform 1 TAF5 0.035 TBP-associated factor 5 TBL1Y 0.035 transducin beta-like 1Y TBL1Y 0.035 transducin beta-like 1Y TBL1Y 0.035 transducin beta-like 1Y WDR51B 0.026 WD repeat domain 51B WDR1 0.024 WD repeat-containing protein 1 isoform 1 IFT80 0.024 WD repeat domain 56 PHIP 0.024 pleckstrin homology domain interacting protein [Homo... GNB1 0.023 guanine nucleotide-binding protein, beta-1 subunit [... CDC20 0.023 cell division cycle 20 PAK1IP1 0.023 PAK1 interacting protein 1 WDR65 0.022 WD repeat domain 65 WDR59 0.022 WD repeat domain 59 WDR69 0.022 WD repeat domain 69 WDR17 0.019 WD repeat domain 17 isoform 2 WDR17 0.019 WD repeat domain 17 isoform 1 WDR3 0.019 WD repeat-containing protein 3 TAF5L 0.019 PCAF associated factor 65 beta isoform a WDR1 0.019 WD repeat-containing protein 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.