CPSF2 26324

Name: CPSF2	Sequence: fasta or formatted (782aa)		NCBI GI: 34101288
Description: cleavage and polyadenylation specific factor 2		Referenced in: Polyadenylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 40 2 C cysteine 1.9 15 2 D aspartate 7.8 61 2 E glutamate 9.1 71 3 F phenylalanine 3.6 28 2 G glycine 6.0 47 2 H histidine 2.4 19 1 I isoleucine 6.4 50 2 K lysine 7.3 57 2 L leucine 10.7 84 2 M methionine 2.4 19 2 N asparagine 2.6 20 2 P proline 4.3 34 2 Q glutamine 4.7 37 2 R arginine 4.5 35 2 S serine 6.9 54 2 T threonine 4.5 35 2 V valine 6.1 48 2 W tryptophan 0.9 7 1 Y tyrosine 2.7 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cleavage and polyadenylation specific factor 2 [Homo... CPSF3 0.075 cleavage and polyadenylation specific factor 3, 73kDa... CPSF3L 0.071 cleavage and polyadenylation specific factor 3-like ... INTS9 0.026 integrator complex subunit 9 isoform 2 INTS9 0.026 integrator complex subunit 9 isoform 1 NCOR1 0.011 nuclear receptor co-repressor 1 CTAGE1 0.009 cutaneous T-cell lymphoma-associated antigen 1 isofo... CTAGE5 0.008 CTAGE family, member 5 isoform 3 CTAGE5 0.008 CTAGE family, member 5 isoform 1 CTAGE5 0.008 CTAGE family, member 5 isoform 4 CTAGE5 0.008 CTAGE family, member 5 isoform 2 CNGA1 0.008 cyclic nucleotide gated channel alpha 1 isoform 1 [... CNGA1 0.008 cyclic nucleotide gated channel alpha 1 isoform 2 [H... TRIM44 0.008 DIPB protein KRI1 0.008 KRI1 homolog MAP1B 0.008 microtubule-associated protein 1B NKAP 0.008 NFKB activating protein MYH13 0.008 myosin, heavy polypeptide 13, skeletal muscle [Homo... CENPE 0.008 centromere protein E MYH9 0.007 myosin, heavy polypeptide 9, non-muscle DDX27 0.007 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 HSP90AA1 0.007 heat shock 90kDa protein 1, alpha isoform 2 HSP90AA1 0.007 heat shock 90kDa protein 1, alpha isoform 1 NEFM 0.007 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.007 neurofilament, medium polypeptide 150kDa isoform 2 ... ANKRD11 0.007 ankyrin repeat domain 11 BAT2D1 0.007 HBxAg transactivated protein 2 CALR 0.006 calreticulin precursor NEXN 0.006 nexilin (F actin binding protein) RGAG4 0.006 retrotransposon gag domain containing 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.