Guide to the Human Genome
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Name: KRI1 Sequence: fasta or formatted (709aa) NCBI GI: 145580615
Description:

KRI1 homolog

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         41           3
 C cysteine            1.1          8           1
 D aspartate           8.0         57           2
 E glutamate          15.0        106           8
 F phenylalanine       3.4         24           1
 G glycine             5.1         36           2
 H histidine           1.1          8           1
 I isoleucine          1.4         10           2
 K lysine             10.0         71           3
 L leucine             7.8         55           2
 M methionine          1.4         10           1
 N asparagine          2.5         18           1
 P proline             5.4         38           2
 Q glutamine           6.1         43           2
 R arginine            8.6         61           3
 S serine              6.8         48           3
 T threonine           2.8         20           1
 V valine              3.0         21           2
 W tryptophan          1.1          8           1
 Y tyrosine            3.7         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   KRI1 homolog 
LOC283685             0.035   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TCHH                  0.032   trichohyalin 
LOC283685             0.032   PREDICTED: golgi autoantigen, golgin subfamily a-li...
EIF5B                 0.031   eukaryotic translation initiation factor 5B 
LOC283767             0.031   golgi autoantigen, golgin subfamily a-like 
LOC727832             0.030   golgi autoantigen, golgin subfamily a-like 
NSBP1                 0.030   nucleosomal binding protein 1 
CALD1                 0.029   caldesmon 1 isoform 1 
LOC645202             0.027   PREDICTED: hypothetical protein LOC645202 
RBM25                 0.025   RNA binding motif protein 25 
LOC100133758          0.025   PREDICTED: hypothetical protein, partial 
LOC400352             0.025   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.025   PREDICTED: similar to Putative golgin subfamily A m...
RPGR                  0.023   retinitis pigmentosa GTPase regulator isoform C [Hom...
LOC440243             0.023   PREDICTED: Putative golgin subfamily A member 6-lik...
ANKRD12               0.023   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.023   ankyrin repeat domain 12 isoform 1 
ANKRD11               0.022   ankyrin repeat domain 11 
CALD1                 0.022   caldesmon 1 isoform 5 
CALD1                 0.022   caldesmon 1 isoform 2 
CGNL1                 0.022   cingulin-like 1 
NEXN                  0.022   nexilin (F actin binding protein) 
LOC100133599          0.021   PREDICTED: hypothetical protein 
MLLT4                 0.021   myeloid/lymphoid or mixed-lineage leukemia (trithora...
UPF3B                 0.021   UPF3 regulator of nonsense transcripts homolog B iso...
MAP4K4                0.021   mitogen-activated protein kinase kinase kinase kinas...
LOC100286959          0.021   PREDICTED: hypothetical protein XP_002343921 
KIAA1211              0.021   hypothetical protein LOC57482 
INCENP                0.021   inner centromere protein antigens 135/155kDa isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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