Guide to the Human Genome
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Name: INTS9 Sequence: fasta or formatted (658aa) NCBI GI: 223555968
Description:

integrator complex subunit 9 isoform 1

Referenced in:

Polyadenylation

Other entries for this name:
alt prot [637aa] integrator complex subunit 9 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         29           1
 C cysteine            2.7         18           1
 D aspartate           4.9         32           2
 E glutamate           5.8         38           2
 F phenylalanine       4.0         26           1
 G glycine             4.4         29           2
 H histidine           2.9         19           1
 I isoleucine          5.3         35           2
 K lysine              5.6         37           2
 L leucine            12.5         82           2
 M methionine          2.6         17           2
 N asparagine          3.3         22           1
 P proline             7.9         52           3
 Q glutamine           4.7         31           1
 R arginine            3.2         21           2
 S serine              8.5         56           2
 T threonine           5.3         35           2
 V valine              7.8         51           2
 W tryptophan          0.9          6           1
 Y tyrosine            3.3         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   integrator complex subunit 9 isoform 1 
INTS9                 0.956   integrator complex subunit 9 isoform 2 
CPSF3                 0.037   cleavage and polyadenylation specific factor 3, 73kDa...
CPSF3L                0.036   cleavage and polyadenylation specific factor 3-like ...
CPSF2                 0.030   cleavage and polyadenylation specific factor 2 [Homo...
MAP2K4                0.005   mitogen-activated protein kinase kinase 4 
KIAA0907              0.005   hypothetical protein LOC22889 
LOC100292611          0.005   PREDICTED: similar to pre-B lymphocyte gene 2 [Homo...
LOC100290528          0.005   PREDICTED: hypothetical protein XP_002347495 
MAPK7                 0.005   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.005   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.005   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.005   mitogen-activated protein kinase 7 isoform 2 
HNRNPA3               0.005   heterogeneous nuclear ribonucleoprotein A3 
DIP2C                 0.005   DIP2 disco-interacting protein 2 homolog C 
MSH5                  0.004   mutS homolog 5 isoform a 
CAMSAP1L1             0.004   calmodulin regulated spectrin-associated protein 1-l...
LOC100292197          0.004   PREDICTED: hypothetical protein 
SETBP1                0.004   SET binding protein 1 isoform a 
SETD1B                0.004   SET domain containing 1B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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