Guide to the Human Genome
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Search of human proteins with 33946295

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33946295 zinc finger protein 326 isoform 3 [Homo sapiens]
         (70 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33946295 zinc finger protein 326 isoform 3 [Homo sapiens]          159   4e-40
gi|33946297 zinc finger protein 326 isoform 1 [Homo sapiens]          159   4e-40
gi|119395750 keratin 1 [Homo sapiens]                                  38   0.002
gi|14043070 heterogeneous nuclear ribonucleoprotein A1 isoform b...    36   0.006
gi|55956899 keratin 9 [Homo sapiens]                                   36   0.007
gi|5803036 heterogeneous nuclear ribonucleoprotein A0 [Homo sapi...    35   0.010
gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo sap...    35   0.010
gi|4502847 cold inducible RNA binding protein [Homo sapiens]           34   0.022
gi|212549553 interleukin enhancer binding factor 3 isoform d [Ho...    34   0.022
gi|24234750 interleukin enhancer binding factor 3 isoform a [Hom...    34   0.022
gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens]           34   0.028
gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens]          34   0.028
gi|56699409 RNA binding motif protein, X-linked [Homo sapiens]         34   0.028
gi|239747524 PREDICTED: similar to serum response factor-related...    33   0.048
gi|14141157 heterogeneous nuclear ribonucleoprotein H3 isoform a...    33   0.048
gi|56699482 hypothetical protein LOC25940 [Homo sapiens]               33   0.048
gi|4504733 insulin receptor substrate 4 [Homo sapiens]                 33   0.063
gi|109452587 family with sequence similarity 98, member B isofor...    33   0.063
gi|195972866 keratin 10 [Homo sapiens]                                 32   0.082
gi|153252068 testes-specific heterogenous nuclear ribonucleoprot...    32   0.082
gi|223890219 RNA binding motif protein, X-linked-like 3 [Homo sa...    32   0.11 
gi|52632383 heterogeneous nuclear ribonucleoprotein L isoform a ...    32   0.14 
gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo sa...    31   0.18 
gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo sap...    31   0.18 
gi|167466169 growth arrest-specific 1 [Homo sapiens]                   30   0.41 
gi|57864582 hornerin [Homo sapiens]                                    30   0.53 
gi|62122917 filaggrin family member 2 [Homo sapiens]                   30   0.53 
gi|14043072 heterogeneous nuclear ribonucleoprotein A2/B1 isofor...    30   0.53 
gi|4504447 heterogeneous nuclear ribonucleoprotein A2/B1 isoform...    30   0.53 
gi|153945796 keratin associated protein 6-3 [Homo sapiens]             30   0.53 

>gi|33946295 zinc finger protein 326 isoform 3 [Homo sapiens]
          Length = 70

 Score =  159 bits (402), Expect = 4e-40
 Identities = 70/70 (100%), Positives = 70/70 (100%)

Query: 1  MDFEDDYTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMD 60
          MDFEDDYTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMD
Sbjct: 1  MDFEDDYTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMD 60

Query: 61 NHSGGGGGSR 70
          NHSGGGGGSR
Sbjct: 61 NHSGGGGGSR 70


>gi|33946297 zinc finger protein 326 isoform 1 [Homo sapiens]
          Length = 582

 Score =  159 bits (402), Expect = 4e-40
 Identities = 70/70 (100%), Positives = 70/70 (100%)

Query: 1  MDFEDDYTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMD 60
          MDFEDDYTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMD
Sbjct: 1  MDFEDDYTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMD 60

Query: 61 NHSGGGGGSR 70
          NHSGGGGGSR
Sbjct: 61 NHSGGGGGSR 70


>gi|119395750 keratin 1 [Homo sapiens]
          Length = 644

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 24/57 (42%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 13  RNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGGS 69
           R +Y G  G     G GSYG      GHGSYG   S   Y   S G    S GG GS
Sbjct: 549 RGSY-GSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGS 604



 Score = 30.8 bits (68), Expect = 0.24
 Identities = 23/52 (44%), Positives = 23/52 (44%), Gaps = 5/52 (9%)

Query: 18  GFNGMDRDYGPGSYG-GMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGG 68
           G  G     G GSYG G     G GSYG   S       SYG    SGGGGG
Sbjct: 526 GSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYG----SGGGGG 573



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 16/38 (42%), Positives = 16/38 (42%)

Query: 32  GGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGGS 69
           GG  R  G G YG   S       SYG     GGG GS
Sbjct: 514 GGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGS 551


>gi|14043070 heterogeneous nuclear ribonucleoprotein A1 isoform b
           [Homo sapiens]
          Length = 372

 Score = 36.2 bits (82), Expect = 0.006
 Identities = 28/65 (43%), Positives = 28/65 (43%), Gaps = 15/65 (23%)

Query: 16  YQGFNGMDRDYGPGS--YGGMDRDYGHG---------SYGGQRSMDSYLNQSYGMDNHSG 64
           Y GF G D  YG G   Y G  R YG G          YGG  S DSY N   G     G
Sbjct: 244 YNGF-GNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNN---GGGGGFG 299

Query: 65  GGGGS 69
           GG GS
Sbjct: 300 GGSGS 304


>gi|55956899 keratin 9 [Homo sapiens]
          Length = 623

 Score = 35.8 bits (81), Expect = 0.007
 Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 4   EDDYTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYG----HGSYGGQRSMDSYLNQSYGM 59
           ED  +  A +    G  G    YG GS GG    YG     G YGG          SYG 
Sbjct: 463 EDFESSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGG 522

Query: 60  DNHSGGGGG 68
            + SGGG G
Sbjct: 523 GSGSGGGSG 531



 Score = 32.3 bits (72), Expect = 0.082
 Identities = 20/42 (47%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 27  GPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGG 68
           G GS GG    YG GS  G  S   Y   S G   HSGG GG
Sbjct: 509 GSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGG--GHSGGSGG 548



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 9/62 (14%)

Query: 16  YQGFNGMDRDYGPGSYGGMDRDYG---------HGSYGGQRSMDSYLNQSYGMDNHSGGG 66
           + G +G +   G GS GG    YG          GS+GG          SYG    + G 
Sbjct: 550 HSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGS 609

Query: 67  GG 68
           GG
Sbjct: 610 GG 611



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 17/43 (39%), Positives = 19/43 (44%)

Query: 27  GPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGGS 69
           G GS GG    +G GS  G  S  SY        +  G GGGS
Sbjct: 575 GSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGS 617



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 7/59 (11%)

Query: 17  QGFNGMDRDYGPGSYGGMDRDYGHGSYGGQ-------RSMDSYLNQSYGMDNHSGGGGG 68
           +G +G     G GS GG    YG GS GG         S  S  N   G  +  G GGG
Sbjct: 513 RGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGG 571



 Score = 26.2 bits (56), Expect = 5.9
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 3/40 (7%)

Query: 29  GSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGG 68
           G +GG  R +G  S GG  S   +     G    SGGG G
Sbjct: 88  GGFGGGSRGFGGASGGGYSSSGGF---GGGFGGGSGGGFG 124



 Score = 25.8 bits (55), Expect = 7.7
 Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 18  GFNGMDRDYGPGSYGGMDRDYGH-GSYGGQRSMDSYLNQSYGMDNHSGGGGGS 69
           GF G  R +G  S GG     G  G +GG            G     G GGG+
Sbjct: 89  GFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGA 141



 Score = 25.8 bits (55), Expect = 7.7
 Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 27  GPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGG--GGGS 69
           G G  GG   +YG GS  G  S   Y   S G    SGG  GGGS
Sbjct: 547 GGGHSGGSGGNYGGGSGSGGGSGGGYGGGS-GSRGGSGGSHGGGS 590


>gi|5803036 heterogeneous nuclear ribonucleoprotein A0 [Homo
           sapiens]
          Length = 305

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 18  GFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGG 68
           G+N      G  SYGG D   G G +G      S    SYG     GGGGG
Sbjct: 230 GYNAYGGGGGGSSYGGSDYGNGFGGFGSYSQHQS----SYGPMKSGGGGGG 276



 Score = 26.6 bits (57), Expect = 4.5
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 27  GPGSYGGMDRD-YGHGSYGGQRSMDSYLNQSYGMDNHSGGGGG 68
           G G  GG D++    G  GG  S   Y     G  N  GGGGG
Sbjct: 197 GRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGG 239


>gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo
           sapiens]
          Length = 378

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 10/61 (16%)

Query: 16  YQGFNGMDRDYG-------PGSYGGMDRDYGH--GSYGGQRSMDSY-LNQSYGMDNHSGG 65
           Y GF G   +YG        G YGG    YG+  G YGG    D Y    ++G  N+ GG
Sbjct: 267 YNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGG 326

Query: 66  G 66
           G
Sbjct: 327 G 327



 Score = 29.3 bits (64), Expect = 0.70
 Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 16/70 (22%)

Query: 16  YQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQ---------------RSMDSYLNQSYGMD 60
           Y G+N    ++G G+YGG       G+Y GQ               RS  S     YG  
Sbjct: 309 YDGYNE-GGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPYGGGYGSG 367

Query: 61  NHSGGGGGSR 70
             SGG G  R
Sbjct: 368 GGSGGYGSRR 377



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 3/50 (6%)

Query: 21  GMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGGSR 70
           G  R  G GS   M R    G  GG            G   + GGGGGSR
Sbjct: 211 GSQRGRGGGSGNFMGRGGNFGGGGGNFGRGGNFG---GRGGYGGGGGGSR 257


>gi|4502847 cold inducible RNA binding protein [Homo sapiens]
          Length = 172

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 10/61 (16%)

Query: 13  RNTYQGFNGMDRDYGPGSYGGMDRDYG-------HGSYGGQRSMDSYLNQSYGMDNHSGG 65
           R  ++G  G  R +   S GG DR YG        G YGG R   S  +QS G  + S G
Sbjct: 101 RGFFRGGRGRGRGF---SRGGGDRGYGGNRFESRSGGYGGSRDYYSSRSQSGGYSDRSSG 157

Query: 66  G 66
           G
Sbjct: 158 G 158


>gi|212549553 interleukin enhancer binding factor 3 isoform d [Homo
           sapiens]
          Length = 898

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 6/54 (11%)

Query: 21  GMDRDYGPGSYGG-MDRDYGHGSYG-GQRSMDSYLNQSYGMDNHS----GGGGG 68
           G  R +G  ++GG M+   G+GSYG G  S  +  +Q Y    HS    GGGGG
Sbjct: 656 GRGRGFGGANHGGYMNAGAGYGSYGYGGNSATAGYSQFYSNGGHSGNASGGGGG 709



 Score = 30.8 bits (68), Expect = 0.24
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 10/65 (15%)

Query: 6   DYTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQ--SYGMDNHS 63
           +Y+ S  R+    +      Y PGS+GG    YG GS GG     SY  +   Y   N++
Sbjct: 812 NYSGSGGRSGGNSYGSGGASYNPGSHGG----YGGGSGGG----SSYQGKQGGYSQSNYN 863

Query: 64  GGGGG 68
             G G
Sbjct: 864 SPGSG 868



 Score = 30.0 bits (66), Expect = 0.41
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 14  NTYQGFNGMDRDYG-PGSYGGMDRDY----GHGSYGGQRSMDSYLN--QSYGMDNHSGGG 66
           N  QG       Y  PG  GG D +Y     +   GG+   +SY +   SY   +H G G
Sbjct: 782 NHGQGSYSYSNSYNSPGGGGGSDYNYESKFNYSGSGGRSGGNSYGSGGASYNPGSHGGYG 841

Query: 67  GGS 69
           GGS
Sbjct: 842 GGS 844


>gi|24234750 interleukin enhancer binding factor 3 isoform a [Homo
           sapiens]
          Length = 894

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 6/54 (11%)

Query: 21  GMDRDYGPGSYGG-MDRDYGHGSYG-GQRSMDSYLNQSYGMDNHS----GGGGG 68
           G  R +G  ++GG M+   G+GSYG G  S  +  +Q Y    HS    GGGGG
Sbjct: 652 GRGRGFGGANHGGYMNAGAGYGSYGYGGNSATAGYSQFYSNGGHSGNASGGGGG 705



 Score = 30.8 bits (68), Expect = 0.24
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 10/65 (15%)

Query: 6   DYTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQ--SYGMDNHS 63
           +Y+ S  R+    +      Y PGS+GG    YG GS GG     SY  +   Y   N++
Sbjct: 808 NYSGSGGRSGGNSYGSGGASYNPGSHGG----YGGGSGGG----SSYQGKQGGYSQSNYN 859

Query: 64  GGGGG 68
             G G
Sbjct: 860 SPGSG 864



 Score = 30.0 bits (66), Expect = 0.41
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 14  NTYQGFNGMDRDYG-PGSYGGMDRDY----GHGSYGGQRSMDSYLN--QSYGMDNHSGGG 66
           N  QG       Y  PG  GG D +Y     +   GG+   +SY +   SY   +H G G
Sbjct: 778 NHGQGSYSYSNSYNSPGGGGGSDYNYESKFNYSGSGGRSGGNSYGSGGASYNPGSHGGYG 837

Query: 67  GGS 69
           GGS
Sbjct: 838 GGS 840


>gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens]
          Length = 589

 Score = 33.9 bits (76), Expect = 0.028
 Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 5/58 (8%)

Query: 18  GFNGMDRDYGP---GSYGGMDRDYG--HGSYGGQRSMDSYLNQSYGMDNHSGGGGGSR 70
           G+ G    YG    G YGG    YG   G YGG R         YG D   GG GG R
Sbjct: 475 GYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDR 532



 Score = 33.5 bits (75), Expect = 0.037
 Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 18  GFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYL----NQSYGMDNHSGGGGGSR 70
           G+ G    YG G  GG   D   G YGG R   S      +  YG D   GG GG R
Sbjct: 504 GYGGDRGGYG-GDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDR 559



 Score = 31.2 bits (69), Expect = 0.18
 Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 9/55 (16%)

Query: 16  YQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGGSR 70
           Y+G  G   D G   YGG   D   G YGG RS        Y  D   GG GG R
Sbjct: 402 YRGRGGRGGDRG--GYGG---DRSGGGYGGDRSSGG----GYSGDRSGGGYGGDR 447



 Score = 29.3 bits (64), Expect = 0.70
 Identities = 23/56 (41%), Positives = 23/56 (41%), Gaps = 8/56 (14%)

Query: 18  GFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSY---LNQSYGMDNHSGGGGGSR 70
           G  G DR  G    GG   D   G YGG RS   Y       YG D   GG GG R
Sbjct: 422 GGYGGDRSSG----GGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGD-RGGGYGGDR 472



 Score = 29.3 bits (64), Expect = 0.70
 Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 8/62 (12%)

Query: 7   YTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGG 66
           Y     R  Y G  G    YG    GG   D   G YGG R         YG D   GG 
Sbjct: 519 YGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDR------GGGYGGDR--GGY 570

Query: 67  GG 68
           GG
Sbjct: 571 GG 572



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 10/50 (20%)

Query: 17  QGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGG 66
           +G+ G     G G  GG DR    G YGG RS        YG D  SGGG
Sbjct: 394 RGYGGERGYRGRGGRGG-DR----GGYGGDRS-----GGGYGGDRSSGGG 433



 Score = 28.1 bits (61), Expect = 1.6
 Identities = 25/54 (46%), Positives = 26/54 (48%), Gaps = 11/54 (20%)

Query: 17  QGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGGSR 70
           +G  G DR  G G YGG DR    G YGG RS        YG D   GG GG R
Sbjct: 525 RGGYGGDRGGGSG-YGG-DRS---GGYGGDRS-----GGGYGGD-RGGGYGGDR 567



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 4/62 (6%)

Query: 3   FEDDYTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNH 62
           +E+    S  +  Y            GS GG    Y    YG Q   DSY  QS G D H
Sbjct: 67  YENQKQSSYSQQPYNNQGQQQNMESSGSQGGRAPSYDQPDYGQQ---DSYDQQS-GYDQH 122

Query: 63  SG 64
            G
Sbjct: 123 QG 124


>gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens]
          Length = 592

 Score = 33.9 bits (76), Expect = 0.028
 Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 5/58 (8%)

Query: 18  GFNGMDRDYGP---GSYGGMDRDYG--HGSYGGQRSMDSYLNQSYGMDNHSGGGGGSR 70
           G+ G    YG    G YGG    YG   G YGG R         YG D   GG GG R
Sbjct: 478 GYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDR 535



 Score = 33.5 bits (75), Expect = 0.037
 Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 18  GFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYL----NQSYGMDNHSGGGGGSR 70
           G+ G    YG G  GG   D   G YGG R   S      +  YG D   GG GG R
Sbjct: 507 GYGGDRGGYG-GDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDR 562



 Score = 31.2 bits (69), Expect = 0.18
 Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 9/55 (16%)

Query: 16  YQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGGSR 70
           Y+G  G   D G   YGG   D   G YGG RS        Y  D   GG GG R
Sbjct: 405 YRGRGGRGGDRG--GYGG---DRSGGGYGGDRSSGG----GYSGDRSGGGYGGDR 450



 Score = 29.3 bits (64), Expect = 0.70
 Identities = 23/56 (41%), Positives = 23/56 (41%), Gaps = 8/56 (14%)

Query: 18  GFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSY---LNQSYGMDNHSGGGGGSR 70
           G  G DR  G    GG   D   G YGG RS   Y       YG D   GG GG R
Sbjct: 425 GGYGGDRSSG----GGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGD-RGGGYGGDR 475



 Score = 29.3 bits (64), Expect = 0.70
 Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 8/62 (12%)

Query: 7   YTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGG 66
           Y     R  Y G  G    YG    GG   D   G YGG R         YG D   GG 
Sbjct: 522 YGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDR------GGGYGGDR--GGY 573

Query: 67  GG 68
           GG
Sbjct: 574 GG 575



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 10/50 (20%)

Query: 17  QGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGG 66
           +G+ G     G G  GG DR    G YGG RS        YG D  SGGG
Sbjct: 397 RGYGGERGYRGRGGRGG-DR----GGYGGDRS-----GGGYGGDRSSGGG 436



 Score = 28.1 bits (61), Expect = 1.6
 Identities = 25/54 (46%), Positives = 26/54 (48%), Gaps = 11/54 (20%)

Query: 17  QGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGGSR 70
           +G  G DR  G G YGG DR    G YGG RS        YG D   GG GG R
Sbjct: 528 RGGYGGDRGGGSG-YGG-DRS---GGYGGDRS-----GGGYGGD-RGGGYGGDR 570



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 4/62 (6%)

Query: 3   FEDDYTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNH 62
           +E+    S  +  Y            GS GG    Y    YG Q   DSY  QS G D H
Sbjct: 70  YENQKQSSYSQQPYNNQGQQQNMESSGSQGGRAPSYDQPDYGQQ---DSYDQQS-GYDQH 125

Query: 63  SG 64
            G
Sbjct: 126 QG 127


>gi|56699409 RNA binding motif protein, X-linked [Homo sapiens]
          Length = 391

 Score = 33.9 bits (76), Expect = 0.028
 Identities = 31/81 (38%), Positives = 39/81 (48%), Gaps = 17/81 (20%)

Query: 6   DYTHSACRNTY--QGFN-----GMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLN--QS 56
           DY HS+ R+ Y  +G++     G DRDY     GG  RD  + SYG  RS         S
Sbjct: 245 DYGHSSSRDDYPSRGYSDRDGYGRDRDYSDHPSGGSYRD-SYESYGNSRSAPPTRGPPPS 303

Query: 57  YG----MDNHSG---GGGGSR 70
           YG     D++S    G GGSR
Sbjct: 304 YGGSSRYDDYSSSRDGYGGSR 324



 Score = 25.8 bits (55), Expect = 7.7
 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 5/48 (10%)

Query: 24  RDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQ-SYGMD----NHSGGG 66
           RDY P       RDYGH S         Y ++  YG D    +H  GG
Sbjct: 232 RDYAPPPRDYTYRDYGHSSSRDDYPSRGYSDRDGYGRDRDYSDHPSGG 279


>gi|239747524 PREDICTED: similar to serum response factor-related
           protein C4 [Homo sapiens]
          Length = 434

 Score = 33.1 bits (74), Expect = 0.048
 Identities = 28/65 (43%), Positives = 30/65 (46%), Gaps = 15/65 (23%)

Query: 16  YQGFNGMDRDYGPGS--YGGMDRDYG-----HGS----YGGQRSMDSYLNQSYGMDNHSG 64
           Y GF G D  YG G   Y G  R YG     +GS    YGG  S +SY N   G     G
Sbjct: 51  YNGF-GNDGGYGGGGPGYSGGSRGYGSVGQGYGSQGSGYGGSGSYNSYNN---GGGGSFG 106

Query: 65  GGGGS 69
           GG GS
Sbjct: 107 GGSGS 111


>gi|14141157 heterogeneous nuclear ribonucleoprotein H3 isoform a
           [Homo sapiens]
          Length = 346

 Score = 33.1 bits (74), Expect = 0.048
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 29  GSYGGMDRDYGHGSYG-GQRSMDSYLNQSYGMDNHSGGGGG 68
           G YGG D   G+ +YG G    D  +    GM  H  GG G
Sbjct: 145 GGYGGFDDYGGYNNYGYGNDGFDDRMRDGRGMGGHGYGGAG 185


>gi|56699482 hypothetical protein LOC25940 [Homo sapiens]
          Length = 518

 Score = 33.1 bits (74), Expect = 0.048
 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 11/62 (17%)

Query: 7   YTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGG 66
           Y HS+    Y G  G ++  G G  GG    Y HG  GG R      +Q    D  SGGG
Sbjct: 343 YEHSS----YGGRGGHEQGGGRGGRGG----YDHGGRGGGRGNK---HQGGWTDGGSGGG 391

Query: 67  GG 68
           GG
Sbjct: 392 GG 393



 Score = 29.3 bits (64), Expect = 0.70
 Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 13/68 (19%)

Query: 16  YQGFNGMDRDYGPGSYGGMDRDYGH--GSYGGQRSMDSYLNQ-----SYGMDN------H 62
           YQ     D  + PG Y G     G+  G YGG ++  SY         Y  DN      H
Sbjct: 394 YQDGGYRDSGFQPGGYHGGHSSGGYQGGGYGGFQTSSSYTGSGYQGGGYQQDNRYQDGGH 453

Query: 63  SGGGGGSR 70
            G  GG R
Sbjct: 454 HGDRGGGR 461


>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
          Length = 1257

 Score = 32.7 bits (73), Expect = 0.063
 Identities = 24/58 (41%), Positives = 26/58 (44%), Gaps = 8/58 (13%)

Query: 12  CRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGGS 69
           C    QG  G     G GS GG     GHGS GGQ   D +     G   +SGGG GS
Sbjct: 545 CSRDGQGTAG-----GHGSGGGQRPGGGHGSGGGQGPGDGH---GSGGGKNSGGGKGS 594



 Score = 28.9 bits (63), Expect = 0.91
 Identities = 25/65 (38%), Positives = 25/65 (38%), Gaps = 10/65 (15%)

Query: 12  CRNTYQGFNGMDRDYGPGSYG------GMDRDYGHGSYGGQR---SMDSYLNQSYGMDNH 62
           C    QG  G     G GS G      G     GHGS GGQR      S   Q  G D H
Sbjct: 522 CSGEGQGSRGGQGSNGQGSGGNQCSRDGQGTAGGHGSGGGQRPGGGHGSGGGQGPG-DGH 580

Query: 63  SGGGG 67
             GGG
Sbjct: 581 GSGGG 585


>gi|109452587 family with sequence similarity 98, member B isoform 1
           [Homo sapiens]
          Length = 433

 Score = 32.7 bits (73), Expect = 0.063
 Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 18  GFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGGSR 70
           G  G     G G YGG     G G YGG+   D Y     G     GGGGG R
Sbjct: 380 GGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPY-GGGGGGGGGGGGGGGYR 431



 Score = 31.6 bits (70), Expect = 0.14
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 18  GFNGMDRDYGPGSYGGMDRDYGHGSYGGQ---RSMDSYLNQSYGMDNHSGGGGG 68
           G  G    +G G  GG     G G YGG+        Y  + YG D + GGGGG
Sbjct: 368 GGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYG-DPYGGGGGG 420


>gi|195972866 keratin 10 [Homo sapiens]
          Length = 584

 Score = 32.3 bits (72), Expect = 0.082
 Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 9/53 (16%)

Query: 26  YGPGSYGGMDRDYGH---------GSYGGQRSMDSYLNQSYGMDNHSGGGGGS 69
           YG GS GG     GH         G YGG  S        YG  + SGG GGS
Sbjct: 473 YGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGS 525



 Score = 30.0 bits (66), Expect = 0.41
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 27  GPGSYGGMDRDYGH-GSYGGQRSMDSYLNQSYGMDNHSGGGGGS 69
           G G +GG    YG  G +GG     SY + S+G       GGGS
Sbjct: 63  GGGCFGGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGS 106



 Score = 29.6 bits (65), Expect = 0.53
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 16  YQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGG 68
           Y G  G       GSYG     +G GSYGG     S+   S+G  +  GGG G
Sbjct: 74  YGGLGGFGGGSFRGSYGSSS--FG-GSYGGSFGGGSFGGGSFGGGSFGGGGFG 123



 Score = 29.3 bits (64), Expect = 0.70
 Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 4/40 (10%)

Query: 26  YGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGG 65
           YG GS GG    YG GS GG  S        YG  + SGG
Sbjct: 530 YGGGSSGGGGGGYGGGSSGGGSSSGG----GYGGGSSSGG 565



 Score = 28.9 bits (63), Expect = 0.91
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 26  YGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGG 68
           YG GS GG     G+G            +  YG  +  GGGGG
Sbjct: 499 YGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGG 541



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 4/43 (9%)

Query: 27  GPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGGS 69
           G GS+GG    YG GS GG  S   +    +G  +  G GGGS
Sbjct: 465 GGGSFGG---GYGGGSSGGGSSGGGH-GGGHGGSSGGGYGGGS 503



 Score = 26.2 bits (56), Expect = 5.9
 Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 3/53 (5%)

Query: 18  GFNGMDRDYGPGSYGGMDRDYGH---GSYGGQRSMDSYLNQSYGMDNHSGGGG 67
           G+ G     G G YGG     G    G YGG  S   + + S G    S   G
Sbjct: 529 GYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKG 581



 Score = 25.8 bits (55), Expect = 7.7
 Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 7/41 (17%)

Query: 29  GSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGGS 69
           G YGG     G G YGG  S         G  +  G GGGS
Sbjct: 528 GGYGGGSSGGGGGGYGGGSS-------GGGSSSGGGYGGGS 561


>gi|153252068 testes-specific heterogenous nuclear ribonucleoprotein
           G-T [Homo sapiens]
          Length = 392

 Score = 32.3 bits (72), Expect = 0.082
 Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 9/70 (12%)

Query: 6   DYTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYG-HGSYGGQRS-MDSY---LNQSYGMD 60
           DY HS+ R+        DRD     YGG DRDYG H S G  R   +SY      + G  
Sbjct: 242 DYGHSSVRDDCPLRGYSDRD----GYGGRDRDYGDHLSRGSHREPFESYGELRGAAPGRG 297

Query: 61  NHSGGGGGSR 70
                GGG R
Sbjct: 298 TPPSYGGGGR 307


>gi|223890219 RNA binding motif protein, X-linked-like 3 [Homo
           sapiens]
          Length = 1067

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 5   DDYT--HSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNH 62
           D YT  +S  R+++    G    YG G      +     +YGG R ++S  N S+G  + 
Sbjct: 884 DHYTEAYSRGRDSFSNSYGRSDHYGRGGCYEEYQGRSPNAYGGGRGLNS-SNNSHGRSHR 942

Query: 63  SGGGG 67
            GGGG
Sbjct: 943 YGGGG 947



 Score = 28.1 bits (61), Expect = 1.6
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 24/87 (27%)

Query: 5   DDYTHSACRNTYQGFNGMDRDY---GPGSYGG----MDRDYGHGS---YGGQRSMDSYLN 54
           D +++S  R+ + G  G   +Y    P +YGG       +  HG    YGG    + Y  
Sbjct: 895 DSFSNSYGRSDHYGRGGCYEEYQGRSPNAYGGGRGLNSSNNSHGRSHRYGGGGRYEEYRG 954

Query: 55  --------------QSYGMDNHSGGGG 67
                         +SYG+ +  GGGG
Sbjct: 955 PSPDAHSGGRDSSIKSYGLSDRYGGGG 981


>gi|52632383 heterogeneous nuclear ribonucleoprotein L isoform a
          [Homo sapiens]
          Length = 589

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 29 GSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGG 68
          G  GG  R YG GS GG+      L      D H GGGGG
Sbjct: 39 GGGGGGGRYYGGGSEGGR--APKRLKTDNAGDQHGGGGGG 76


>gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo
           sapiens]
          Length = 390

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 8/53 (15%)

Query: 6   DYTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYG 58
           DY HS+ R+ Y       R YG     G DRDY     GG    DSY  +SYG
Sbjct: 245 DYGHSSSRDDYPS-----RGYGDRDGYGRDRDYSDHPSGGS-YRDSY--ESYG 289



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 5/35 (14%)

Query: 24  RDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYG 58
           RDY P       RDYGH S     S D Y ++ YG
Sbjct: 232 RDYAPPPRDYTYRDYGHSS-----SRDDYPSRGYG 261


>gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo
           sapiens]
          Length = 390

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 8/53 (15%)

Query: 6   DYTHSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYG 58
           DY HS+ R+ Y       R YG     G DRDY     GG    DSY  +SYG
Sbjct: 245 DYGHSSSRDDYPS-----RGYGDRDGYGRDRDYSDHPSGGS-YRDSY--ESYG 289



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 5/35 (14%)

Query: 24  RDYGPGSYGGMDRDYGHGSYGGQRSMDSYLNQSYG 58
           RDY P       RDYGH S     S D Y ++ YG
Sbjct: 232 RDYAPPPRDYTYRDYGHSS-----SRDDYPSRGYG 261


>gi|167466169 growth arrest-specific 1 [Homo sapiens]
          Length = 345

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 33  GMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGGSR 70
           G +   G GS G    +D Y ++ Y  +  +GG GG +
Sbjct: 245 GAELGNGPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQ 282


>gi|57864582 hornerin [Homo sapiens]
          Length = 2850

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 6   DYTHSACRNTYQGFNGMDRDYGP-GSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSG 64
           D+ HS+    +   +G     GP GS  G    +GH S  GQ S   Y     G  + SG
Sbjct: 668 DFGHSSSYGQHGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSS--GYSQHGSGSSHSSG 725



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 16   YQGFNGMDRDYGP-GSYGGMDRDYG-HGSYGGQRSMDSYLNQSYGMDNHSG-GGGGSR 70
            ++  +G    Y   GS  G    YG HGS  GQ S       S G  +H G  G GSR
Sbjct: 1170 HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSR 1227



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 16   YQGFNGMDRDYGP-GSYGGMDRDYG-HGSYGGQRSMDSYLNQSYGMDNHSG-GGGGSR 70
            ++  +G    Y   GS  G    YG HGS  GQ S       S G  +H G  G GSR
Sbjct: 2580 HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSR 2637



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 10/51 (19%)

Query: 29   GSYGGMDRDYG-HGSYGGQRSMDSYLNQSYGMD---------NHSGGGGGS 69
            GS  G    YG HGS  GQ S  S      G D         NH GG  GS
Sbjct: 2776 GSGSGQSSSYGQHGSGSGQSSGYSQHGSGSGQDGYSYCKGGSNHDGGSSGS 2826


>gi|62122917 filaggrin family member 2 [Homo sapiens]
          Length = 2391

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 8    THSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSY---GGQRSMDSYLNQSYGMDN 61
            +H    ++ +  +G  + +  GSYG  + DYGH  Y   GG R   S  + S+  D+
Sbjct: 2326 SHFQSHSSERQRHGSSQVWKHGSYGPAEYDYGHTGYGPSGGSRKSISNSHLSWSTDS 2382


>gi|14043072 heterogeneous nuclear ribonucleoprotein A2/B1 isoform
           B1 [Homo sapiens]
          Length = 353

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)

Query: 27  GPGSYGGMDRDYGH--GSYGGQRSMDSYLNQSYGMDNHSGGG 66
           G G YGG    YG+  G YGG    D+Y   +YG  N++  G
Sbjct: 265 GRGGYGGGGPGYGNQGGGYGG--GYDNYGGGNYGSGNYNDFG 304


>gi|4504447 heterogeneous nuclear ribonucleoprotein A2/B1 isoform A2
           [Homo sapiens]
          Length = 341

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)

Query: 27  GPGSYGGMDRDYGH--GSYGGQRSMDSYLNQSYGMDNHSGGG 66
           G G YGG    YG+  G YGG    D+Y   +YG  N++  G
Sbjct: 253 GRGGYGGGGPGYGNQGGGYGG--GYDNYGGGNYGSGNYNDFG 292


>gi|153945796 keratin associated protein 6-3 [Homo sapiens]
          Length = 110

 Score = 29.6 bits (65), Expect = 0.53
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 8  THSACRNTYQGFNGMDRDYGPGSYGGMDRDYGHGSYG 44
          T++ C + Y+ +NG    YG   YGG+   YG   YG
Sbjct: 5  TNTMCGSYYRNYNG-GHGYGCCGYGGLGCGYGGCGYG 40



 Score = 29.3 bits (64), Expect = 0.70
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 18 GFNGMDRDYG--PGSYGGMDRDYGHGSYGGQRSMDSYLNQSYGMDNHSGGGGGSR 70
          G+ G+   YG     YGG+   YG     G R +D      YG  +HS  G G R
Sbjct: 43 GYGGLGFGYGGLDCGYGGLGCGYGSFCGCGYRGLDCGYGCGYGYVSHSFCGCGYR 97


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.139    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,564,126
Number of Sequences: 37866
Number of extensions: 159818
Number of successful extensions: 585
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 328
Number of HSP's gapped (non-prelim): 249
length of query: 70
length of database: 18,247,518
effective HSP length: 43
effective length of query: 27
effective length of database: 16,619,280
effective search space: 448720560
effective search space used: 448720560
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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