Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TFR2 Sequence: fasta or formatted (801aa) NCBI GI: 33589848
Description:

transferrin receptor 2

Referenced in:

Iron, Copper, and Arsenic Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         64           3
 C cysteine            0.6          5           1
 D aspartate           5.7         46           2
 E glutamate           5.5         44           5
 F phenylalanine       4.5         36           1
 G glycine             8.6         69           2
 H histidine           2.9         23           1
 I isoleucine          3.1         25           1
 K lysine              2.0         16           1
 L leucine            11.7         94           3
 M methionine          1.2         10           1
 N asparagine          2.9         23           2
 P proline             6.5         52           2
 Q glutamine           5.2         42           2
 R arginine            7.0         56           2
 S serine              7.7         62           2
 T threonine           4.4         35           1
 V valine              7.2         58           2
 W tryptophan          1.6         13           1
 Y tyrosine            3.5         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transferrin receptor 2 
TFRC                  0.337   transferrin receptor 
TFRC                  0.337   transferrin receptor 
FOLH1                 0.146   folate hydrolase 1 isoform 1 
NAALADL1              0.143   N-acetylated alpha-linked acidic dipeptidase-like 1 ...
NAALAD2               0.140   N-acetylated alpha-linked acidic dipeptidase 2 
FOLH1                 0.136   folate hydrolase 1 isoform 2 
FOLH1B                0.090   folate hydrolase 1B 
NAALADL2              0.078   N-acetylated alpha-linked acidic dipeptidase 2 [Hom...
ERMP1                 0.011   aminopeptidase Fxna 
NCLN                  0.010   nicalin 
PGCP                  0.009   plasma glutamate carboxypeptidase 
EGF                   0.005   epidermal growth factor (beta-urogastrone) 
SHROOM4               0.004   shroom family member 4 
TMC4                  0.004   transmembrane channel-like 4 isoform 2 
TMC4                  0.004   transmembrane channel-like 4 isoform 1 
LOC100131530          0.004   PREDICTED: hypothetical protein 
C6orf132              0.004   PREDICTED: chromosome 6 open reading frame 132 [Hom...
LOC100131530          0.004   PREDICTED: hypothetical protein 
C6orf132              0.004   PREDICTED: chromosome 6 open reading frame 132 [Hom...
LOC100131530          0.004   PREDICTED: hypothetical protein 
C6orf132              0.004   PREDICTED: hypothetical protein LOC647024 
JPH2                  0.004   junctophilin 2 isoform 1 
RNF111                0.004   ring finger protein 111 
COL4A6                0.004   type IV alpha 6 collagen isoform A precursor 
ATG2B                 0.004   ATG2 autophagy related 2 homolog B 
ATN1                  0.004   atrophin-1 
ATN1                  0.004   atrophin-1 
COL4A6                0.004   type IV alpha 6 collagen isoform B precursor 
VAV1                  0.004   vav 1 guanine nucleotide exchange factor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press