Guide to the Human Genome
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Name: PGCP Sequence: fasta or formatted (472aa) NCBI GI: 7706387
Description:

plasma glutamate carboxypeptidase

Referenced in:

Carboxypeptidases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         40           3
 C cysteine            0.8          4           1
 D aspartate           4.2         20           2
 E glutamate           6.8         32           2
 F phenylalanine       3.4         16           3
 G glycine             8.5         40           3
 H histidine           2.5         12           2
 I isoleucine          7.0         33           2
 K lysine              5.1         24           1
 L leucine             8.9         42           2
 M methionine          3.4         16           2
 N asparagine          2.8         13           1
 P proline             3.8         18           2
 Q glutamine           4.7         22           2
 R arginine            4.0         19           2
 S serine              7.6         36           2
 T threonine           4.9         23           1
 V valine              8.3         39           2
 W tryptophan          1.3          6           1
 Y tyrosine            3.6         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   plasma glutamate carboxypeptidase 
NAALAD2               0.029   N-acetylated alpha-linked acidic dipeptidase 2 
FOLH1                 0.027   folate hydrolase 1 isoform 1 
FOLH1                 0.027   folate hydrolase 1 isoform 2 
FOLH1B                0.027   folate hydrolase 1B 
NAALADL1              0.021   N-acetylated alpha-linked acidic dipeptidase-like 1 ...
TFRC                  0.015   transferrin receptor 
TFRC                  0.015   transferrin receptor 
TFR2                  0.015   transferrin receptor 2 
HDAC9                 0.008   histone deacetylase 9 isoform 5 
HDAC9                 0.008   histone deacetylase 9 isoform 4 
NAALADL2              0.005   N-acetylated alpha-linked acidic dipeptidase 2 [Hom...
SYNJ2                 0.005   synaptojanin 2 
KIF26B                0.005   kinesin family member 26B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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