Guide to the Human Genome
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Name: NAALAD2 Sequence: fasta or formatted (740aa) NCBI GI: 4885505
Description:

N-acetylated alpha-linked acidic dipeptidase 2

Referenced in:

Iron, Copper, and Arsenic Metabolism
Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         57           3
 C cysteine            0.4          3           1
 D aspartate           4.9         36           2
 E glutamate           6.2         46           2
 F phenylalanine       5.0         37           2
 G glycine             7.0         52           2
 H histidine           1.9         14           1
 I isoleucine          7.2         53           2
 K lysine              7.0         52           2
 L leucine             8.9         66           2
 M methionine          1.8         13           2
 N asparagine          5.1         38           2
 P proline             5.4         40           3
 Q glutamine           2.6         19           2
 R arginine            4.7         35           2
 S serine              7.2         53           2
 T threonine           4.3         32           3
 V valine              5.5         41           2
 W tryptophan          1.6         12           1
 Y tyrosine            5.5         41           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   N-acetylated alpha-linked acidic dipeptidase 2 
FOLH1                 0.712   folate hydrolase 1 isoform 1 
FOLH1                 0.666   folate hydrolase 1 isoform 2 
FOLH1B                0.434   folate hydrolase 1B 
NAALADL1              0.316   N-acetylated alpha-linked acidic dipeptidase-like 1 ...
TFR2                  0.151   transferrin receptor 2 
TFRC                  0.130   transferrin receptor 
TFRC                  0.130   transferrin receptor 
NAALADL2              0.121   N-acetylated alpha-linked acidic dipeptidase 2 [Hom...
LOC100291911          0.018   PREDICTED: similar to Putative uncharacterized prot...
LOC100287484          0.018   PREDICTED: hypothetical protein XP_002343105 
PGCP                  0.018   plasma glutamate carboxypeptidase 
NCLN                  0.005   nicalin 
FREM2                 0.005   FRAS1-related extracellular matrix protein 2 precurs...
CDH12                 0.005   cadherin 12, type 2 preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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