Guide to the Human Genome
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Name: TFRC Sequence: fasta or formatted (760aa) NCBI GI: 189458817
Description:

transferrin receptor

Referenced in:

Iron, Copper, and Arsenic Metabolism

Other entries for this name:
alt mRNA [760aa] transferrin receptor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         60           3
 C cysteine            1.1          8           1
 D aspartate           5.7         43           2
 E glutamate           6.1         46           3
 F phenylalanine       6.1         46           2
 G glycine             7.0         53           2
 H histidine           1.7         13           1
 I isoleucine          4.2         32           2
 K lysine              6.6         50           2
 L leucine             9.3         71           3
 M methionine          1.8         14           2
 N asparagine          5.5         42           2
 P proline             4.1         31           2
 Q glutamine           3.0         23           1
 R arginine            4.3         33           2
 S serine              7.4         56           2
 T threonine           5.8         44           2
 V valine              7.4         56           3
 W tryptophan          1.4         11           1
 Y tyrosine            3.7         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transferrin receptor 
TFRC                  1.000   transferrin receptor 
TFR2                  0.357   transferrin receptor 2 
FOLH1                 0.133   folate hydrolase 1 isoform 1 
NAALAD2               0.127   N-acetylated alpha-linked acidic dipeptidase 2 
NAALADL1              0.121   N-acetylated alpha-linked acidic dipeptidase-like 1 ...
FOLH1                 0.112   folate hydrolase 1 isoform 2 
FOLH1B                0.087   folate hydrolase 1B 
NAALADL2              0.066   N-acetylated alpha-linked acidic dipeptidase 2 [Hom...
PGCP                  0.009   plasma glutamate carboxypeptidase 
NCLN                  0.009   nicalin 
RNF130                0.005   ring finger protein 130 
TMEM8C                0.005   transmembrane protein 8C 
LRRC66                0.004   leucine rich repeat containing 66 
PKM2                  0.004   pyruvate kinase, muscle isoform M2 
PKM2                  0.004   pyruvate kinase, muscle isoform M1 
PKM2                  0.004   pyruvate kinase, muscle isoform M1 
LOC652797             0.004   PREDICTED: similar to pyruvate kinase, muscle [Homo...
FER1L6                0.004   fer-1-like 6 
EDEM3                 0.003   ER degradation enhancer, mannosidase alpha-like 3 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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