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Search of human proteins with 33469976
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33469976 activating transcription factor 4 [Homo sapiens]
(351 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33469974 activating transcription factor 4 [Homo sapiens] 707 0.0
gi|33469976 activating transcription factor 4 [Homo sapiens] 707 0.0
gi|12597625 activating transcription factor 5 [Homo sapiens] 94 2e-19
gi|4502263 activating transcription factor 3 isoform 1 [Homo sap... 49 7e-06
gi|71902536 activating transcription factor 3 isoform 1 [Homo sa... 49 7e-06
gi|8924246 basic leucine zipper transcription factor, ATF-like 3... 45 1e-04
gi|59938776 cAMP responsive element binding protein 5 isoform de... 45 1e-04
gi|59938774 cAMP responsive element binding protein 5 isoform be... 45 1e-04
gi|59938772 cAMP responsive element binding protein 5 isoform ga... 45 1e-04
gi|59938770 cAMP responsive element binding protein 5 isoform al... 45 1e-04
gi|22538422 activating transcription factor 2 [Homo sapiens] 44 3e-04
gi|5453563 basic leucine zipper transcription factor, ATF-like [... 42 6e-04
gi|52145312 hypothetical protein LOC118611 [Homo sapiens] 42 6e-04
gi|205277421 Jun dimerization protein 2 isoform b [Homo sapiens] 42 0.001
gi|205277419 Jun dimerization protein 2 isoform a [Homo sapiens] 42 0.001
gi|205277417 Jun dimerization protein 2 isoform a [Homo sapiens] 42 0.001
gi|18497306 Jun dimerization protein 2 isoform a [Homo sapiens] 42 0.001
gi|4504421 hepatic leukemia factor [Homo sapiens] 41 0.001
gi|8922563 DnaJ (Hsp40) homolog, subfamily C, member 17 [Homo sa... 41 0.001
gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B is... 41 0.002
gi|4885245 FOS-like antigen 2 [Homo sapiens] 40 0.002
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 40 0.002
gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens] 40 0.004
gi|116008447 CAP-GLY domain containing linker protein 2 isoform ... 39 0.005
gi|14702162 CAP-GLY domain containing linker protein 2 isoform 2... 39 0.005
gi|223972670 thyrotrophic embryonic factor isoform 2 [Homo sapiens] 39 0.007
gi|4507431 thyrotrophic embryonic factor isoform 1 [Homo sapiens] 39 0.007
gi|33457316 pleckstrin homology domain containing, family O memb... 39 0.007
gi|4885241 v-fos FBJ murine osteosarcoma viral oncogene homolog ... 38 0.012
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 38 0.012
>gi|33469974 activating transcription factor 4 [Homo sapiens]
Length = 351
Score = 707 bits (1825), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 1 MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE 60
MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE
Sbjct: 1 MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE 60
Query: 61 WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC 120
WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC
Sbjct: 61 WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC 120
Query: 121 DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL 180
DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL
Sbjct: 121 DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL 180
Query: 181 ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG 240
ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG
Sbjct: 181 ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG 240
Query: 241 SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR 300
SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR
Sbjct: 241 SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR 300
Query: 301 AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP 351
AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP
Sbjct: 301 AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP 351
>gi|33469976 activating transcription factor 4 [Homo sapiens]
Length = 351
Score = 707 bits (1825), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 1 MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE 60
MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE
Sbjct: 1 MTEMSFLSSEVLVGDLMSPFDQSGLGAEESLGLLDDYLEVAKHFKPHGFSSDKAKAGSSE 60
Query: 61 WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC 120
WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC
Sbjct: 61 WLAVDGLVSPSNNSKEDAFSGTDWMLEKMDLKEFDLDALLGIDDLETMPDDLLTTLDDTC 120
Query: 121 DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL 180
DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL
Sbjct: 121 DLFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSL 180
Query: 181 ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG 240
ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG
Sbjct: 181 ELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGICMSPESYLGSPQHSPSTRG 240
Query: 241 SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR 300
SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR
Sbjct: 241 SPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKR 300
Query: 301 AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP 351
AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP
Sbjct: 301 AEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKKRVP 351
>gi|12597625 activating transcription factor 5 [Homo sapiens]
Length = 282
Score = 93.6 bits (231), Expect = 2e-19
Identities = 51/97 (52%), Positives = 67/97 (69%), Gaps = 8/97 (8%)
Query: 257 RPKPYDPPGEKMVA-----AKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECK 311
+P P PP +A A +G D+K KK +QNK+AA RYRQ+KRAE EAL GEC+
Sbjct: 185 QPPPPSPPQPSRLAPYPHPATTRG---DRKQKKRDQNKSAALRYRQRKRAEGEALEGECQ 241
Query: 312 ELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKK 348
LE +N LKERA+S+ +EIQY+KDL+ EV KAR ++
Sbjct: 242 GLEARNRELKERAESVEREIQYVKDLLIEVYKARSQR 278
>gi|4502263 activating transcription factor 3 isoform 1 [Homo
sapiens]
Length = 181
Score = 48.9 bits (115), Expect = 7e-06
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 263 PPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKE 322
P G + A+V E+ ++K ++ E+NK AA + R KK+ + E L E ++LE N LK
Sbjct: 71 PLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKA 130
Query: 323 RADSLAKEIQYL 334
+ + L E Q+L
Sbjct: 131 QIEELKNEKQHL 142
>gi|71902536 activating transcription factor 3 isoform 1 [Homo
sapiens]
Length = 181
Score = 48.9 bits (115), Expect = 7e-06
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 263 PPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKE 322
P G + A+V E+ ++K ++ E+NK AA + R KK+ + E L E ++LE N LK
Sbjct: 71 PLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKA 130
Query: 323 RADSLAKEIQYL 334
+ + L E Q+L
Sbjct: 131 QIEELKNEKQHL 142
>gi|8924246 basic leucine zipper transcription factor, ATF-like 3
[Homo sapiens]
Length = 127
Score = 45.1 bits (105), Expect = 1e-04
Identities = 26/101 (25%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 243 NRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAE 302
++ LP+ G + + P + P + + E D+K+++ E+N+ AA R R+K+ +
Sbjct: 2 SQGLPAAGSVLQRSVAAPGNQPQPQ--PQQQSPEDDDRKVRRREKNRVAAQRSRKKQTQK 59
Query: 303 QEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRK 343
+ L E + LE++N L+ L +E+++L + ++E K
Sbjct: 60 ADKLHEEYESLEQENTMLRREIGKLTEELKHLTEALKEHEK 100
>gi|59938776 cAMP responsive element binding protein 5 isoform delta
[Homo sapiens]
Length = 369
Score = 44.7 bits (104), Expect = 1e-04
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 205 PQCIKEEDTPSDND-SGICMSPESYLGSPQHSPSTRGSPNRSLPSPGVLCGSARPKPYDP 263
PQ +++ P + S + P + SP H P G+ + P+ + + +P P
Sbjct: 164 PQPHHQQNHPHHHSHSHLHAHPAHHQTSP-HPPLHTGNQAQVSPATQQMQPTQTIQPPQP 222
Query: 264 PGEKMVAAKVKGEKLDKKLKK-MEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKE 322
G + +V E D++ +K +E+N+ AATR RQK++ +L + +EL + N L+
Sbjct: 223 TGGRR--RRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQN 280
Query: 323 RADSLAKEIQYLKDLI 338
L E+ LK L+
Sbjct: 281 EVSMLKNEVAQLKQLL 296
>gi|59938774 cAMP responsive element binding protein 5 isoform beta
[Homo sapiens]
Length = 501
Score = 44.7 bits (104), Expect = 1e-04
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 205 PQCIKEEDTPSDND-SGICMSPESYLGSPQHSPSTRGSPNRSLPSPGVLCGSARPKPYDP 263
PQ +++ P + S + P + SP H P G+ + P+ + + +P P
Sbjct: 296 PQPHHQQNHPHHHSHSHLHAHPAHHQTSP-HPPLHTGNQAQVSPATQQMQPTQTIQPPQP 354
Query: 264 PGEKMVAAKVKGEKLDKKLKK-MEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKE 322
G + +V E D++ +K +E+N+ AATR RQK++ +L + +EL + N L+
Sbjct: 355 TGGRR--RRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQN 412
Query: 323 RADSLAKEIQYLKDLI 338
L E+ LK L+
Sbjct: 413 EVSMLKNEVAQLKQLL 428
>gi|59938772 cAMP responsive element binding protein 5 isoform gamma
[Homo sapiens]
Length = 475
Score = 44.7 bits (104), Expect = 1e-04
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 205 PQCIKEEDTPSDND-SGICMSPESYLGSPQHSPSTRGSPNRSLPSPGVLCGSARPKPYDP 263
PQ +++ P + S + P + SP H P G+ + P+ + + +P P
Sbjct: 270 PQPHHQQNHPHHHSHSHLHAHPAHHQTSP-HPPLHTGNQAQVSPATQQMQPTQTIQPPQP 328
Query: 264 PGEKMVAAKVKGEKLDKKLKK-MEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKE 322
G + +V E D++ +K +E+N+ AATR RQK++ +L + +EL + N L+
Sbjct: 329 TGGRR--RRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQN 386
Query: 323 RADSLAKEIQYLKDLI 338
L E+ LK L+
Sbjct: 387 EVSMLKNEVAQLKQLL 402
>gi|59938770 cAMP responsive element binding protein 5 isoform alpha
[Homo sapiens]
Length = 508
Score = 44.7 bits (104), Expect = 1e-04
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 205 PQCIKEEDTPSDND-SGICMSPESYLGSPQHSPSTRGSPNRSLPSPGVLCGSARPKPYDP 263
PQ +++ P + S + P + SP H P G+ + P+ + + +P P
Sbjct: 303 PQPHHQQNHPHHHSHSHLHAHPAHHQTSP-HPPLHTGNQAQVSPATQQMQPTQTIQPPQP 361
Query: 264 PGEKMVAAKVKGEKLDKKLKK-MEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKE 322
G + +V E D++ +K +E+N+ AATR RQK++ +L + +EL + N L+
Sbjct: 362 TGGRR--RRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQN 419
Query: 323 RADSLAKEIQYLKDLI 338
L E+ LK L+
Sbjct: 420 EVSMLKNEVAQLKQLL 435
>gi|22538422 activating transcription factor 2 [Homo sapiens]
Length = 505
Score = 43.5 bits (101), Expect = 3e-04
Identities = 43/191 (22%), Positives = 71/191 (37%), Gaps = 33/191 (17%)
Query: 154 VAPFTFLQPLPLSPGVLSSTPDHSFSLELGSEVDITEGDRKPDYTAYVAMIPQCIKEEDT 213
V P T + +P PG S P + + K A + + DT
Sbjct: 249 VRPVTMVPSVPGIPGPSSPQP--------------VQSEAKMRLKAALTQQHPPVTNGDT 294
Query: 214 PSDNDSGICMS------PESYLGSPQHSPSTRGSPNRSLPSPGVLCGSARPKPYDPPGEK 267
+ SG+ + P+S + T SP + P G R + P EK
Sbjct: 295 VKGHGSGLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSGRRRRAANEDPDEK 354
Query: 268 MVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSL 327
+ K +E+N+ AA+R RQK++ ++L + ++L N L+ L
Sbjct: 355 -------------RRKFLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLL 401
Query: 328 AKEIQYLKDLI 338
E+ LK L+
Sbjct: 402 RNEVAQLKQLL 412
>gi|5453563 basic leucine zipper transcription factor, ATF-like
[Homo sapiens]
Length = 125
Score = 42.4 bits (98), Expect = 6e-04
Identities = 21/76 (27%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 263 PPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKE 322
PPG++ + V+ ++++ E+N+ AA + RQ++ + + L E ++LEK+N AL++
Sbjct: 17 PPGKQDSSDDVR------RVQRREKNRIAAQKSRQRQTQKADTLHLESEDLEKQNAALRK 70
Query: 323 RADSLAKEIQYLKDLI 338
L +E++Y ++
Sbjct: 71 EIKQLTEELKYFTSVL 86
>gi|52145312 hypothetical protein LOC118611 [Homo sapiens]
Length = 699
Score = 42.4 bits (98), Expect = 6e-04
Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 17/137 (12%)
Query: 124 APLVQETNKQPPQTVNPIGH-------LPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDH 176
AP V++ +P + PIG L L++P + +FL+P L PG L D
Sbjct: 437 APPVEQ---KPTRHFLPIGDSSPSDDCLSRDLSEPTERRHQSFLKPRILFPGFLCPLQDV 493
Query: 177 SFSLELGSEVDITEGDRKPDYTA--YVAMIPQCIKEED--TPSDNDSGICMSPESYLGSP 232
SL+ + V I K DYT V I +C K ED TP + + +P GSP
Sbjct: 494 CASLQEDNGVQIESKFPKGDYTCCDLVVKIKECKKSEDPTTPEPSPAAPSPAPRDGAGSP 553
Query: 233 ---QHSPSTRGSPNRSL 246
+ ++ +P RSL
Sbjct: 554 GLSEDCSESQQTPARSL 570
>gi|205277421 Jun dimerization protein 2 isoform b [Homo sapiens]
Length = 174
Score = 41.6 bits (96), Expect = 0.001
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 276 EKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYL 334
E+ +++ ++ E+NK AA R R KK+ E L E + LE N LK + + L +E Q L
Sbjct: 81 EEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQL 139
>gi|205277419 Jun dimerization protein 2 isoform a [Homo sapiens]
Length = 163
Score = 41.6 bits (96), Expect = 0.001
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 276 EKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYL 334
E+ +++ ++ E+NK AA R R KK+ E L E + LE N LK + + L +E Q L
Sbjct: 70 EEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQL 128
>gi|205277417 Jun dimerization protein 2 isoform a [Homo sapiens]
Length = 163
Score = 41.6 bits (96), Expect = 0.001
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 276 EKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYL 334
E+ +++ ++ E+NK AA R R KK+ E L E + LE N LK + + L +E Q L
Sbjct: 70 EEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQL 128
>gi|18497306 Jun dimerization protein 2 isoform a [Homo sapiens]
Length = 163
Score = 41.6 bits (96), Expect = 0.001
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 276 EKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYL 334
E+ +++ ++ E+NK AA R R KK+ E L E + LE N LK + + L +E Q L
Sbjct: 70 EEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQL 128
>gi|4504421 hepatic leukemia factor [Homo sapiens]
Length = 295
Score = 41.2 bits (95), Expect = 0.001
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 22/155 (14%)
Query: 214 PSDNDSGICMSPESYLGSPQHSPS-----TRGSPNRSLPSPGVLCGSARP--KPYDPPGE 266
PS N + P L + +++PS T P P P L S+ P + +DP
Sbjct: 139 PSPNCMQSPIRPGQLLPANRNTPSPIDPDTIQVPVGYEPDPADLALSSIPGQEMFDPRKR 198
Query: 267 KMVAAKVKGEKLDKKLKKM---------------EQNKTAATRYRQKKRAEQEALTGECK 311
K ++K + + KK +K+ +N AA R R +R ++ +
Sbjct: 199 KFSEEELKPQPMIKKARKVFIPDDLKDDKYWARRRKNNMAAKRSRDARRLKENQIAIRAS 258
Query: 312 ELEKKNEALKERADSLAKEIQYLKDLIEEVRKARG 346
LEK+N AL++ L KE+ K+++ + G
Sbjct: 259 FLEKENSALRQEVADLRKELGKCKNILAKYEARHG 293
>gi|8922563 DnaJ (Hsp40) homolog, subfamily C, member 17 [Homo
sapiens]
Length = 304
Score = 41.2 bits (95), Expect = 0.001
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 251 VLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGEC 310
VL +A YD + A + +KLD+K KK++ + A R Q + +E+E +
Sbjct: 62 VLTDAAARAAYDKVRKAKKQAAERTQKLDEKRKKVKLDLEARERQAQAQESEEEEESRST 121
Query: 311 KELEKKNEALKERADSLAKEIQYLKDLIEEVRKARGKK 348
+ LE++ E L+E +E Q L + E++R+ R ++
Sbjct: 122 RTLEQEIERLREEGSRQLEEQQRL--IREQIRQERDQR 157
>gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B
isoform 1 [Homo sapiens]
Length = 338
Score = 40.8 bits (94), Expect = 0.002
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 201 VAMIPQCIKEEDTPSDNDSGICMSPESYLG-SPQHSPSTRGSPNRSLPSPGVLCGSARPK 259
+A P + D P + S MS S G S PST G+ S P P AR +
Sbjct: 87 LASQPPVVDPYDMPGTSYSTPGMSGYSSGGASGSGGPSTSGTT--SGPGPA---RPARAR 141
Query: 260 PYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEA 319
P P E + E+ +K+ + E+NK AA + R ++R + L E +LE++
Sbjct: 142 PRRPREETLTP-----EEEEKRRVRRERNKLAAAKCRNRRRELTDRLQAETDQLEEEKAE 196
Query: 320 LKERADSLAKEIQYLK 335
L+ L KE + L+
Sbjct: 197 LESEIAELQKEKERLE 212
>gi|4885245 FOS-like antigen 2 [Homo sapiens]
Length = 326
Score = 40.4 bits (93), Expect = 0.002
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 225 PESYLGSPQHSPSTRGSPNR-SLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLK 283
P S+ SP P P +LP PGV+ G + ++ E+ +K+
Sbjct: 77 PRSHPYSPL--PGLASVPGHMALPRPGVIKTIGTTV-----GRRRRDEQLSPEEEEKRRI 129
Query: 284 KMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLI 338
+ E+NK AA + R ++R E L E +ELE++ L++ L KE + L+ ++
Sbjct: 130 RRERNKLAAAKCRNRRRELTEKLQAETEELEEEKSGLQKEIAELQKEKEKLEFML 184
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 40.4 bits (93), Expect = 0.002
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 235 SPSTRGSPNRSLPSPGVLCGSARPKPYDPPGEKMVAAKVKG-------------EKLDKK 281
SPS+ SP P+P S P P P ++ VKG E+L K+
Sbjct: 289 SPSSTSSPEGP-PAPPKQHSSTSPFPTSTPLRRITKKFVKGSTEKNKLRLQRDQERLGKQ 347
Query: 282 LKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEV 341
LK + + + KRA++EA + +E E K + +E+ + KE + L EE
Sbjct: 348 LKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEER 407
Query: 342 RKAR 345
RK R
Sbjct: 408 RKER 411
>gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]
Length = 269
Score = 39.7 bits (91), Expect = 0.004
Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 205 PQCIKEEDTPSDNDSGICMSPE----------SYLGSPQHSPSTRGSPNRSLPSPGVLCG 254
P+ +K E D D+ + P S + Q +P T P RS P G
Sbjct: 116 PRLLKREPDWGDGDAPGSLLPAQVAACAQTVVSLAAAGQPTPPTSPEPPRSSPRQTPAPG 175
Query: 255 SARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELE 314
AR K G + + + ++ E+N A + R K + + + + EL
Sbjct: 176 PAREKSAGKRGPDRGSPEYR--------QRRERNNIAVRKSRDKAKRRNQEMQQKLVELS 227
Query: 315 KKNEALKERADSLAKEIQYLKDLIEEV 341
+NE L +R + L +++ L+ +++
Sbjct: 228 AENEKLHQRVEQLTRDLAGLRQFFKQL 254
>gi|116008447 CAP-GLY domain containing linker protein 2 isoform 1
[Homo sapiens]
Length = 1046
Score = 39.3 bits (90), Expect = 0.005
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 266 EKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERAD 325
E+ + K E L KL K ++ TA T + RA+ AL +CK EKK +AL +
Sbjct: 816 EETIRTKETVEGLQDKLNKRDKEVTALTSQTEMLRAQVSALESKCKSGEKKVDALLKEKR 875
Query: 326 SLAKEIQ 332
L E++
Sbjct: 876 RLEAELE 882
Score = 30.0 bits (66), Expect = 3.2
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 270 AAKVKGEK-LDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLA 328
A K+ G L + LK+ +Q+ R +RAE T E+EK+ LK + +
Sbjct: 348 ARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHICEVEKEIALLKAQHEQYV 407
Query: 329 KE----IQYLKDLIEEVRKAR 345
E +Q + L+E VRK +
Sbjct: 408 AEAEEKLQRARLLVESVRKEK 428
>gi|14702162 CAP-GLY domain containing linker protein 2 isoform 2
[Homo sapiens]
Length = 1011
Score = 39.3 bits (90), Expect = 0.005
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 266 EKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERAD 325
E+ + K E L KL K ++ TA T + RA+ AL +CK EKK +AL +
Sbjct: 781 EETIRTKETVEGLQDKLNKRDKEVTALTSQTEMLRAQVSALESKCKSGEKKVDALLKEKR 840
Query: 326 SLAKEIQ 332
L E++
Sbjct: 841 RLEAELE 847
Score = 30.0 bits (66), Expect = 3.2
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 270 AAKVKGEK-LDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLA 328
A K+ G L + LK+ +Q+ R +RAE T E+EK+ LK + +
Sbjct: 348 ARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHICEVEKEIALLKAQHEQYV 407
Query: 329 KE----IQYLKDLIEEVRKAR 345
E +Q + L+E VRK +
Sbjct: 408 AEAEEKLQRARLLVESVRKEK 428
>gi|223972670 thyrotrophic embryonic factor isoform 2 [Homo sapiens]
Length = 273
Score = 38.9 bits (89), Expect = 0.007
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 17/117 (14%)
Query: 247 PSPGVLCGSARP--KPYDPPGEKMVAAKVKGEKLDKKLKKM---------------EQNK 289
P P L S+ P + ++P K +K + + KK KK+ ++N
Sbjct: 155 PDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNN 214
Query: 290 TAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARG 346
AA R R +R ++ +T LEK+N AL+ L KE+ K ++ + G
Sbjct: 215 VAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKYG 271
>gi|4507431 thyrotrophic embryonic factor isoform 1 [Homo sapiens]
Length = 303
Score = 38.9 bits (89), Expect = 0.007
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 17/117 (14%)
Query: 247 PSPGVLCGSARP--KPYDPPGEKMVAAKVKGEKLDKKLKKM---------------EQNK 289
P P L S+ P + ++P K +K + + KK KK+ ++N
Sbjct: 185 PDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNN 244
Query: 290 TAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARG 346
AA R R +R ++ +T LEK+N AL+ L KE+ K ++ + G
Sbjct: 245 VAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKYG 301
>gi|33457316 pleckstrin homology domain containing, family O member
2 [Homo sapiens]
Length = 490
Score = 38.9 bits (89), Expect = 0.007
Identities = 47/178 (26%), Positives = 69/178 (38%), Gaps = 45/178 (25%)
Query: 122 LFAPLVQETNKQPPQTVNPIGHLPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDHSFSLE 181
+FAP + QP +T P+ +P TKP FL P SPG TP
Sbjct: 184 VFAPSNHVSEAQPRETPRPL--MPP--TKP-------FLAPETTSPGDRVETP------- 225
Query: 182 LGSEVDITEGDRKPD-YTAYVAMIPQCIKEEDTPSDNDSGICMSPESYL----------G 230
G+R P +A + P+ ++ +TP++ DSG P S L
Sbjct: 226 --------VGERAPTPVSASSEVSPESQEDSETPAEEDSGSEQPPNSVLPDKLKVSWENP 277
Query: 231 SPQHSPSTRGSPNRSLPSPGVLCGSARP--KPYDPPGEKMVAAKVKGEKLDKKLKKME 286
SPQ +P+ + P + R KP PP K+ EKL + +M+
Sbjct: 278 SPQEAPAAESAEPSQAPCSETSEAAPREGGKPPTPP------PKILSEKLKASMGEMQ 329
>gi|4885241 v-fos FBJ murine osteosarcoma viral oncogene homolog
[Homo sapiens]
Length = 380
Score = 38.1 bits (87), Expect = 0.012
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 265 GEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERA 324
G + ++ E+ +K+ + E+NK AA + R ++R + L E +LE + AL+
Sbjct: 124 GRRGKVEQLSPEEEEKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEI 183
Query: 325 DSLAKEIQYLKDLIEEVRKA 344
+L KE + L+ ++ R A
Sbjct: 184 ANLLKEKEKLEFILAAHRPA 203
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 38.1 bits (87), Expect = 0.012
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 9/136 (6%)
Query: 185 EVDITEGDRKPDYTAYVAMIPQCIKEEDTPSDNDSGIC-MSPESYLGSPQHSPSTRGSPN 243
E + EGD + + A +ED D+D G+ P G +HSP
Sbjct: 22 EEEEEEGDEEEEEEVEAA-------DEDDEEDDDEGVLGRGPGHDRGRDRHSPPGCHLFP 74
Query: 244 RSLPSPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQ 303
P P L P P D +++ + + +K + KK ++NK R R+K+ +E+
Sbjct: 75 PPPPPPPPLPPPPPPPPPDKDDIRLLPSALGVKKRKRGPKKQKENKPGKPRKRKKRDSEE 134
Query: 304 EALTGECKELEKKNEA 319
E E E +K+E+
Sbjct: 135 E-FGSERDEYREKSES 149
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.130 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,515,917
Number of Sequences: 37866
Number of extensions: 865112
Number of successful extensions: 5401
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 295
Number of HSP's that attempted gapping in prelim test: 4252
Number of HSP's gapped (non-prelim): 1404
length of query: 351
length of database: 18,247,518
effective HSP length: 103
effective length of query: 248
effective length of database: 14,347,320
effective search space: 3558135360
effective search space used: 3558135360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.